Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/17/80660f98e0eb402bd0bfaf242a5a73/659_buD-T1-TRNA-1_B23WHTKLT4_1.Aligned.sortedByCoord.out.bam Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b8/97984654ff7164d1af4edfe2ecbb00/.command.sh Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b8/97984654ff7164d1af4edfe2ecbb00/.command.run Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/78/197b5f057a677ec6dbf9ec3464f10d/659_buD-T1-TRNA-1_B23WHTKLT4_1.Aligned.sortedByCoord.out.bam.bai ==> STAGING COMPLETE (4 inputs) [W::hts_idx_load3] The index file is older than the data file: 659_buD-T1-TRNA-1_B23WHTKLT4_1.Aligned.sortedByCoord.out.bam.bai Load BAM file ... Done