Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a8/a2b419f01495c9acf2dbb6cee4cd33/659_djb-T1-TRNA-1_B23WHTKLT4_1_1.fastp.fastq.gz
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b5/107975d7b58107569f5f559e46b142/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b5/107975d7b58107569f5f559e46b142/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a8/a2b419f01495c9acf2dbb6cee4cd33/659_djb-T1-TRNA-1_B23WHTKLT4_1_2.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0f/48786964e3c01c89e64dced9f462e6/659_djb-T1-TRNA-1_B23WHTKLT4_1.Chimeric.out.junction
==> STAGING COMPLETE (6 inputs)

-ctat genome lib [/tmp/nxf.ou80JUKNqN/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.ou80JUKNqN/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.ou80JUKNqN/./star-fusion.preliminary
-sample contains 295983793 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.ou80JUKNqN/ctat_genome_lib_build_dir  -J /tmp/nxf.ou80JUKNqN/659_djb-T1-TRNA-1_B23WHTKLT4_1.Chimeric.out.junction  -O /tmp/nxf.ou80JUKNqN/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.ou80JUKNqN/659_djb-T1-TRNA-1_B23WHTKLT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.ou80JUKNqN/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

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[2290000], rate=50018.20/min -building interval tree based on /tmp/nxf.ou80JUKNqN/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

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[2290000], rate=46513.20/min -building interval tree based on /tmp/nxf.ou80JUKNqN/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

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[2270000], rate=43667.84/min 
[2280000], rate=43209.10/min -building interval tree based on /tmp/nxf.ou80JUKNqN/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

[10000], rate=100000.00/min 
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[2270000], rate=30490.26/min 
[2280000], rate=30569.83/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.ou80JUKNqN/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.ou80JUKNqN/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.ou80JUKNqN/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.ou80JUKNqN/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.ou80JUKNqN/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 6000000.00 reads per min processed...  
 12000000.00 reads per min processed...  
 9000000.00 reads per min processed...  
 8000000.00 reads per min processed...  
 6000000.00 reads per min processed...  
 6000000.00 reads per min processed...  
 5250000.00 reads per min processed...  
 5333333.33 reads per min processed...  
 4909090.91 reads per min processed...  
 5000000.00 reads per min processed...  
 4714285.71 reads per min processed...  
 4800000.00 reads per min processed...  
 4875000.00 reads per min processed...  
 4666666.67 reads per min processed...  
 4736842.11 reads per min processed...  
 4800000.00 reads per min processed...  
 4636363.64 reads per min processed...  
 4695652.17 reads per min processed...  
 4750000.00 reads per min processed...  
 4615384.62 reads per min processed...  
 4666666.67 reads per min processed...  
 4714285.71 reads per min processed...  
 4600000.00 reads per min processed...  
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 4687500.00 reads per min processed...  
 4588235.29 reads per min processed...  
 4500000.00 reads per min processed...  
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 4461538.46 reads per min processed...  
 4390243.90 reads per min processed...  
 4428571.43 reads per min processed...  
 4363636.36 reads per min processed...  
 4400000.00 reads per min processed...  
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 4375000.00 reads per min processed...  
 4408163.27 reads per min processed...  
 4352941.18 reads per min processed...  
 4384615.38 reads per min processed...  
 4415094.34 reads per min processed...  
 4363636.36 reads per min processed...  
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 4421052.63 reads per min processed...  
 4448275.86 reads per min processed...  
 4400000.00 reads per min processed...  
 4426229.51 reads per min processed...  
 4380952.38 reads per min processed...  
 4406250.00 reads per min processed...  
 4430769.23 reads per min processed...  
 4454545.45 reads per min processed...  
 4545454.55 reads per min processed...  
 4500000.00 reads per min processed...  
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 4478873.24 reads per min processed...  
 4500000.00 reads per min processed...  
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 4540540.54 reads per min processed...  
 4500000.00 reads per min processed...  
 4519480.52 reads per min processed...  
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 4500000.00 reads per min processed...  
 4518518.52 reads per min processed...  
 4536585.37 reads per min processed...  
 4500000.00 reads per min processed...  
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 4534883.72 reads per min processed...  
 4551724.14 reads per min processed...  
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 4533333.33 reads per min processed...  
 4500000.00 reads per min processed...  
 4516129.03 reads per min processed...  
 4531914.89 reads per min processed...  
 4500000.00 reads per min processed...  
 4515463.92 reads per min processed...  
 4530612.24 reads per min processed...  
 4500000.00 reads per min processed...  
 4514851.49 reads per min processed...  
 4529411.76 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.ou80JUKNqN/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.ou80JUKNqN/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.ou80JUKNqN/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.ou80JUKNqN/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.ou80JUKNqN/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.ou80JUKNqN/659_djb-T1-TRNA-1_B23WHTKLT4_1.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.ou80JUKNqN/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.ou80JUKNqN/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.ou80JUKNqN/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -322109.311854
EM: Round [1] log likelihood: -321964.622622
EM: Round [2] log likelihood: -321908.283198
EM: Round [3] log likelihood: -321880.932656
EM: Round [4] log likelihood: -321866.403920
EM: Round [5] log likelihood: -321858.285502
EM: Round [6] log likelihood: -321853.551164
EM: Round [7] log likelihood: -321850.666416
EM: Round [8] log likelihood: -321848.827919
EM: Round [9] log likelihood: -321847.604215
EM: Round [10] log likelihood: -321846.756562
EM: Round [11] log likelihood: -321846.148225
EM: Round [12] log likelihood: -321845.697942
EM: Round [13] log likelihood: -321845.355595
EM: Round [14] log likelihood: -321845.089165
EM: Round [15] log likelihood: -321844.877518
EM: Round [16] log likelihood: -321844.706293
EM: Round [17] log likelihood: -321844.565479
EM: Round [18] log likelihood: -321844.447941
EM: Round [19] log likelihood: -321844.348497
EM: Round [20] log likelihood: -321844.263316
EM: Round [21] log likelihood: -321844.189524
EM: Round [22] log likelihood: -321844.124939
EM: Round [23] log likelihood: -321844.067880
EM: Round [24] log likelihood: -321844.017042
EM: Round [25] log likelihood: -321843.971397
EM: Round [26] log likelihood: -321843.930130
EM: Round [27] log likelihood: -321843.892589
EM: Round [28] log likelihood: -321843.858244
EM: Round [29] log likelihood: -321843.826666
EM: Round [30] log likelihood: -321843.797500
EM: Round [31] log likelihood: -321843.770453
EM: Round [32] log likelihood: -321843.745280
EM: Round [33] log likelihood: -321843.721776
EM: Round [34] log likelihood: -321843.699764
EM: Round [35] log likelihood: -321843.679096
EM: Round [36] log likelihood: -321843.659644
EM: Round [37] log likelihood: -321843.641296
EM: Round [38] log likelihood: -321843.623957
EM: Round [39] log likelihood: -321843.607543
EM: Round [40] log likelihood: -321843.591977
EM: Round [41] log likelihood: -321843.577196
EM: Round [42] log likelihood: -321843.563140
EM: Round [43] log likelihood: -321843.549758
EM: Round [44] log likelihood: -321843.537002
EM: Round [45] log likelihood: -321843.524831
EM: Round [46] log likelihood: -321843.513206
EM: Round [47] log likelihood: -321843.502092
EM: Round [48] log likelihood: -321843.491458
EM: Round [49] log likelihood: -321843.481276
EM: Round [50] log likelihood: -321843.471518
EM: Round [51] log likelihood: -321843.462161
EM: Round [52] log likelihood: -321843.453182
EM: Round [53] log likelihood: -321843.444561
EM: Round [54] log likelihood: -321843.436278
EM: Round [55] log likelihood: -321843.428316
EM: Round [56] log likelihood: -321843.420658
EM: Round [57] log likelihood: -321843.413289
EM: Round [58] log likelihood: -321843.406194
EM: Round [59] log likelihood: -321843.399361
EM: Round [60] log likelihood: -321843.392777
EM: Round [61] log likelihood: -321843.386430
EM: Round [62] log likelihood: -321843.380308
EM: Round [63] log likelihood: -321843.374403
EM: Round [64] log likelihood: -321843.368704
EM: Round [65] log likelihood: -321843.363201
EM: Round [66] log likelihood: -321843.357887
EM: Round [67] log likelihood: -321843.352753
EM: Round [68] log likelihood: -321843.347791
EM: Round [69] log likelihood: -321843.342995
EM: Round [70] log likelihood: -321843.338357
EM: Round [71] log likelihood: -321843.333871
EM: Round [72] log likelihood: -321843.329530
EM: Round [73] log likelihood: -321843.325329
EM: Round [74] log likelihood: -321843.321263
EM: Round [75] log likelihood: -321843.317325
EM: Round [76] log likelihood: -321843.313512
EM: Round [77] log likelihood: -321843.309818
EM: Round [78] log likelihood: -321843.306238
EM: Round [79] log likelihood: -321843.302769
EM: Round [80] log likelihood: -321843.299405
EM: Round [81] log likelihood: -321843.296144
EM: Round [82] log likelihood: -321843.292982
EM: Round [83] log likelihood: -321843.289915
EM: Round [84] log likelihood: -321843.286939
EM: Round [85] log likelihood: -321843.284051
EM: Round [86] log likelihood: -321843.281248
EM: Round [87] log likelihood: -321843.278528
EM: Round [88] log likelihood: -321843.275886
EM: Round [89] log likelihood: -321843.273322
EM: Round [90] log likelihood: -321843.270831
EM: Round [91] log likelihood: -321843.268411
EM: Round [92] log likelihood: -321843.266060
EM: Round [93] log likelihood: -321843.263776
EM: Round [94] log likelihood: -321843.261557
EM: Round [95] log likelihood: -321843.259400
EM: Round [96] log likelihood: -321843.257303
EM: Round [97] log likelihood: -321843.255264
EM: Round [98] log likelihood: -321843.253282
EM: Round [99] log likelihood: -321843.251354
EM: Round [100] log likelihood: -321843.249479
EM: Round [101] log likelihood: -321843.247655
EM: Round [102] log likelihood: -321843.245881
EM: Round [103] log likelihood: -321843.244154
EM: Round [104] log likelihood: -321843.242475
EM: Round [105] log likelihood: -321843.240840
EM: Round [106] log likelihood: -321843.239249
EM: Round [107] log likelihood: -321843.237700
EM: Round [108] log likelihood: -321843.236192
EM: Round [109] log likelihood: -321843.234724
EM: Round [110] log likelihood: -321843.233295
EM: Round [111] log likelihood: -321843.231903
EM: Round [112] log likelihood: -321843.230547
EM: Round [113] log likelihood: -321843.229227
EM: Round [114] log likelihood: -321843.227941
EM: Round [115] log likelihood: -321843.226688
EM: Round [116] log likelihood: -321843.225467
EM: Round [117] log likelihood: -321843.224277
EM: Round [118] log likelihood: -321843.223118
EM: Round [119] log likelihood: -321843.221989
EM: Round [120] log likelihood: -321843.220888
EM: Round [121] log likelihood: -321843.219815
EM: Round [122] log likelihood: -321843.218769
EM: Round [123] log likelihood: -321843.217749
EM: Round [124] log likelihood: -321843.216755
EM: Round [125] log likelihood: -321843.215786
EM: Round [126] log likelihood: -321843.214841
EM: Round [127] log likelihood: -321843.213919
EM: Round [128] log likelihood: -321843.213021
EM: Round [129] log likelihood: -321843.212144
EM: Round [130] log likelihood: -321843.211289
EM: Round [131] log likelihood: -321843.210455
EM: Round [132] log likelihood: -321843.209642
EM: Round [133] log likelihood: -321843.208848
EM: Round [134] log likelihood: -321843.208074
EM: Round [135] log likelihood: -321843.207319
EM: Round [136] log likelihood: -321843.206582
EM: Round [137] log likelihood: -321843.205862
EM: Round [138] log likelihood: -321843.205160
EM: Round [139] log likelihood: -321843.204475
EM: Round [140] log likelihood: -321843.203807
EM: Round [141] log likelihood: -321843.203154
EM: Round [142] log likelihood: -321843.202518
EM: Round [143] log likelihood: -321843.201896
EM: Round [144] log likelihood: -321843.201289
EM: Round [145] log likelihood: -321843.200697
EM: Round [146] log likelihood: -321843.200118
EM: Round [147] log likelihood: -321843.199553
EM: Round [148] log likelihood: -321843.199002
EM: Round [149] log likelihood: -321843.198464
EM: Round [150] log likelihood: -321843.197938
EM: Round [151] log likelihood: -321843.197425
EM: Round [152] log likelihood: -321843.196923
EM: Round [153] log likelihood: -321843.196434
EM: Round [154] log likelihood: -321843.195955
EM: Round [155] log likelihood: -321843.195488
EM: Round [156] log likelihood: -321843.195032
EM: Round [157] log likelihood: -321843.194586
EM: Round [158] log likelihood: -321843.194151
EM: Round [159] log likelihood: -321843.193726
EM: Round [160] log likelihood: -321843.193311
EM: Round [161] log likelihood: -321843.192905
EM: Round [162] log likelihood: -321843.192508
EM: Round [163] log likelihood: -321843.192121
EM: Round [164] log likelihood: -321843.191742
EM: Round [165] log likelihood: -321843.191372
EM: Round [166] log likelihood: -321843.191011
EM: Round [167] log likelihood: -321843.190658
EM: Round [168] log likelihood: -321843.190313
EM: Round [169] log likelihood: -321843.189976
EM: Round [170] log likelihood: -321843.189646
EM: Round [171] log likelihood: -321843.189324
EM: Round [172] log likelihood: -321843.189009
EM: Round [173] log likelihood: -321843.188701
EM: Round [174] log likelihood: -321843.188401
EM: Round [175] log likelihood: -321843.188107
EM: Round [176] log likelihood: -321843.187819
EM: Round [177] log likelihood: -321843.187539
EM: Round [178] log likelihood: -321843.187264
EM: Round [179] log likelihood: -321843.186996
EM: Round [180] log likelihood: -321843.186733
EM: Round [181] log likelihood: -321843.186477
EM: Round [182] log likelihood: -321843.186226
EM: Round [183] log likelihood: -321843.185981
EM: Round [184] log likelihood: -321843.185741
EM: Round [185] log likelihood: -321843.185507
EM: Round [186] log likelihood: -321843.185278
EM: Round [187] log likelihood: -321843.185054
EM: Round [188] log likelihood: -321843.184835
EM: Round [189] log likelihood: -321843.184620
EM: Round [190] log likelihood: -321843.184411
EM: Round [191] log likelihood: -321843.184206
EM: Round [192] log likelihood: -321843.184006
EM: Round [193] log likelihood: -321843.183810
EM: Round [194] log likelihood: -321843.183618
EM: Round [195] log likelihood: -321843.183431
EM: Round [196] log likelihood: -321843.183248
EM: Round [197] log likelihood: -321843.183069
EM: Round [198] log likelihood: -321843.182893
EM: Round [199] log likelihood: -321843.182722
EM: Round [200] log likelihood: -321843.182554
EM: Round [201] log likelihood: -321843.182390
EM: Round [202] log likelihood: -321843.182230
EM: Round [203] log likelihood: -321843.182073
EM: Round [204] log likelihood: -321843.181920
EM: Round [205] log likelihood: -321843.181770
EM: Round [206] log likelihood: -321843.181623
EM: Round [207] log likelihood: -321843.181479
EM: Round [208] log likelihood: -321843.181339
EM: Round [209] log likelihood: -321843.181201
EM: Round [210] log likelihood: -321843.181067
EM: Round [211] log likelihood: -321843.180935
EM: Round [212] log likelihood: -321843.180807
EM: Round [213] log likelihood: -321843.180681
EM: Round [214] log likelihood: -321843.180558
EM: Round [215] log likelihood: -321843.180437
EM: Round [216] log likelihood: -321843.180319
EM: Round [217] log likelihood: -321843.180204
EM: Round [218] log likelihood: -321843.180091
EM: Round [219] log likelihood: -321843.179981
EM: Round [220] log likelihood: -321843.179873
EM: Round [221] log likelihood: -321843.179767
EM: Round [222] log likelihood: -321843.179664
EM: Round [223] log likelihood: -321843.179562
EM: Round [224] log likelihood: -321843.179463
EM: Stopping iterations at round 224 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -321732.618443
EM: Round [1] log likelihood: -321604.716702
EM: Round [2] log likelihood: -321557.327431
EM: Round [3] log likelihood: -321535.231327
EM: Round [4] log likelihood: -321523.845215
EM: Round [5] log likelihood: -321517.613680
EM: Round [6] log likelihood: -321514.027568
EM: Round [7] log likelihood: -321511.860295
EM: Round [8] log likelihood: -321510.485633
EM: Round [9] log likelihood: -321509.572533
EM: Round [10] log likelihood: -321508.939739
EM: Round [11] log likelihood: -321508.484292
EM: Round [12] log likelihood: -321508.145462
EM: Round [13] log likelihood: -321507.886069
EM: Round [14] log likelihood: -321507.682517
EM: Round [15] log likelihood: -321507.519329
EM: Round [16] log likelihood: -321507.386037
EM: Round [17] log likelihood: -321507.275366
EM: Round [18] log likelihood: -321507.182141
EM: Round [19] log likelihood: -321507.102596
EM: Round [20] log likelihood: -321507.033942
EM: Round [21] log likelihood: -321506.974078
EM: Round [22] log likelihood: -321506.921395
EM: Round [23] log likelihood: -321506.874649
EM: Round [24] log likelihood: -321506.832860
EM: Round [25] log likelihood: -321506.795252
EM: Round [26] log likelihood: -321506.761200
EM: Round [27] log likelihood: -321506.730202
EM: Round [28] log likelihood: -321506.701842
EM: Round [29] log likelihood: -321506.675781
EM: Round [30] log likelihood: -321506.651737
EM: Round [31] log likelihood: -321506.629471
EM: Round [32] log likelihood: -321506.608784
EM: Round [33] log likelihood: -321506.589506
EM: Round [34] log likelihood: -321506.571492
EM: Round [35] log likelihood: -321506.554617
EM: Round [36] log likelihood: -321506.538774
EM: Round [37] log likelihood: -321506.523868
EM: Round [38] log likelihood: -321506.509818
EM: Round [39] log likelihood: -321506.496550
EM: Round [40] log likelihood: -321506.484003
EM: Round [41] log likelihood: -321506.472119
EM: Round [42] log likelihood: -321506.460848
EM: Round [43] log likelihood: -321506.450145
EM: Round [44] log likelihood: -321506.439969
EM: Round [45] log likelihood: -321506.430285
EM: Round [46] log likelihood: -321506.421059
EM: Round [47] log likelihood: -321506.412262
EM: Round [48] log likelihood: -321506.403866
EM: Round [49] log likelihood: -321506.395847
EM: Round [50] log likelihood: -321506.388181
EM: Round [51] log likelihood: -321506.380849
EM: Round [52] log likelihood: -321506.373830
EM: Round [53] log likelihood: -321506.367108
EM: Round [54] log likelihood: -321506.360666
EM: Round [55] log likelihood: -321506.354488
EM: Round [56] log likelihood: -321506.348561
EM: Round [57] log likelihood: -321506.342872
EM: Round [58] log likelihood: -321506.337409
EM: Round [59] log likelihood: -321506.332159
EM: Round [60] log likelihood: -321506.327113
EM: Round [61] log likelihood: -321506.322261
EM: Round [62] log likelihood: -321506.317593
EM: Round [63] log likelihood: -321506.313101
EM: Round [64] log likelihood: -321506.308777
EM: Round [65] log likelihood: -321506.304612
EM: Round [66] log likelihood: -321506.300600
EM: Round [67] log likelihood: -321506.296733
EM: Round [68] log likelihood: -321506.293006
EM: Round [69] log likelihood: -321506.289412
EM: Round [70] log likelihood: -321506.285945
EM: Round [71] log likelihood: -321506.282601
EM: Round [72] log likelihood: -321506.279373
EM: Round [73] log likelihood: -321506.276257
EM: Round [74] log likelihood: -321506.273249
EM: Round [75] log likelihood: -321506.270343
EM: Round [76] log likelihood: -321506.267536
EM: Round [77] log likelihood: -321506.264824
EM: Round [78] log likelihood: -321506.262203
EM: Round [79] log likelihood: -321506.259670
EM: Round [80] log likelihood: -321506.257220
EM: Round [81] log likelihood: -321506.254851
EM: Round [82] log likelihood: -321506.252560
EM: Round [83] log likelihood: -321506.250343
EM: Round [84] log likelihood: -321506.248199
EM: Round [85] log likelihood: -321506.246123
EM: Round [86] log likelihood: -321506.244114
EM: Round [87] log likelihood: -321506.242169
EM: Round [88] log likelihood: -321506.240286
EM: Round [89] log likelihood: -321506.238462
EM: Round [90] log likelihood: -321506.236695
EM: Round [91] log likelihood: -321506.234984
EM: Round [92] log likelihood: -321506.233326
EM: Round [93] log likelihood: -321506.231720
EM: Round [94] log likelihood: -321506.230163
EM: Round [95] log likelihood: -321506.228654
EM: Round [96] log likelihood: -321506.227191
EM: Round [97] log likelihood: -321506.225772
EM: Round [98] log likelihood: -321506.224397
EM: Round [99] log likelihood: -321506.223063
EM: Round [100] log likelihood: -321506.221770
EM: Round [101] log likelihood: -321506.220515
EM: Round [102] log likelihood: -321506.219298
EM: Round [103] log likelihood: -321506.218116
EM: Round [104] log likelihood: -321506.216970
EM: Round [105] log likelihood: -321506.215858
EM: Round [106] log likelihood: -321506.214778
EM: Round [107] log likelihood: -321506.213731
EM: Round [108] log likelihood: -321506.212713
EM: Round [109] log likelihood: -321506.211726
EM: Round [110] log likelihood: -321506.210767
EM: Round [111] log likelihood: -321506.209835
EM: Round [112] log likelihood: -321506.208931
EM: Round [113] log likelihood: -321506.208053
EM: Round [114] log likelihood: -321506.207199
EM: Round [115] log likelihood: -321506.206371
EM: Round [116] log likelihood: -321506.205565
EM: Round [117] log likelihood: -321506.204783
EM: Round [118] log likelihood: -321506.204023
EM: Round [119] log likelihood: -321506.203284
EM: Round [120] log likelihood: -321506.202566
EM: Round [121] log likelihood: -321506.201868
EM: Round [122] log likelihood: -321506.201190
EM: Round [123] log likelihood: -321506.200530
EM: Round [124] log likelihood: -321506.199889
EM: Round [125] log likelihood: -321506.199266
EM: Round [126] log likelihood: -321506.198660
EM: Round [127] log likelihood: -321506.198071
EM: Round [128] log likelihood: -321506.197498
EM: Round [129] log likelihood: -321506.196940
EM: Round [130] log likelihood: -321506.196398
EM: Round [131] log likelihood: -321506.195871
EM: Round [132] log likelihood: -321506.195358
EM: Round [133] log likelihood: -321506.194859
EM: Round [134] log likelihood: -321506.194374
EM: Round [135] log likelihood: -321506.193902
EM: Round [136] log likelihood: -321506.193442
EM: Round [137] log likelihood: -321506.192995
EM: Round [138] log likelihood: -321506.192560
EM: Round [139] log likelihood: -321506.192137
EM: Round [140] log likelihood: -321506.191725
EM: Round [141] log likelihood: -321506.191324
EM: Round [142] log likelihood: -321506.190933
EM: Round [143] log likelihood: -321506.190553
EM: Round [144] log likelihood: -321506.190183
EM: Round [145] log likelihood: -321506.189823
EM: Round [146] log likelihood: -321506.189473
EM: Round [147] log likelihood: -321506.189131
EM: Round [148] log likelihood: -321506.188799
EM: Round [149] log likelihood: -321506.188475
EM: Round [150] log likelihood: -321506.188160
EM: Round [151] log likelihood: -321506.187853
EM: Round [152] log likelihood: -321506.187554
EM: Round [153] log likelihood: -321506.187263
EM: Round [154] log likelihood: -321506.186980
EM: Round [155] log likelihood: -321506.186703
EM: Round [156] log likelihood: -321506.186434
EM: Round [157] log likelihood: -321506.186172
EM: Round [158] log likelihood: -321506.185917
EM: Round [159] log likelihood: -321506.185668
EM: Round [160] log likelihood: -321506.185426
EM: Round [161] log likelihood: -321506.185190
EM: Round [162] log likelihood: -321506.184960
EM: Round [163] log likelihood: -321506.184736
EM: Round [164] log likelihood: -321506.184517
EM: Round [165] log likelihood: -321506.184305
EM: Round [166] log likelihood: -321506.184097
EM: Round [167] log likelihood: -321506.183895
EM: Round [168] log likelihood: -321506.183698
EM: Round [169] log likelihood: -321506.183506
EM: Round [170] log likelihood: -321506.183319
EM: Round [171] log likelihood: -321506.183136
EM: Round [172] log likelihood: -321506.182959
EM: Round [173] log likelihood: -321506.182785
EM: Round [174] log likelihood: -321506.182616
EM: Round [175] log likelihood: -321506.182452
EM: Round [176] log likelihood: -321506.182291
EM: Round [177] log likelihood: -321506.182135
EM: Round [178] log likelihood: -321506.181982
EM: Round [179] log likelihood: -321506.181833
EM: Round [180] log likelihood: -321506.181688
EM: Round [181] log likelihood: -321506.181547
EM: Round [182] log likelihood: -321506.181409
EM: Round [183] log likelihood: -321506.181274
EM: Round [184] log likelihood: -321506.181143
EM: Round [185] log likelihood: -321506.181015
EM: Round [186] log likelihood: -321506.180890
EM: Round [187] log likelihood: -321506.180768
EM: Round [188] log likelihood: -321506.180650
EM: Round [189] log likelihood: -321506.180534
EM: Round [190] log likelihood: -321506.180421
EM: Round [191] log likelihood: -321506.180311
EM: Round [192] log likelihood: -321506.180203
EM: Round [193] log likelihood: -321506.180099
EM: Round [194] log likelihood: -321506.179996
EM: Round [195] log likelihood: -321506.179897
EM: Stopping iterations at round 195 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.ou80JUKNqN/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.ou80JUKNqN/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.ou80JUKNqN/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.ou80JUKNqN/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.ou80JUKNqN/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.ou80JUKNqN/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.ou80JUKNqN/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.ou80JUKNqN/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.ou80JUKNqN/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.ou80JUKNqN/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.ou80JUKNqN/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.ou80JUKNqN/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.ou80JUKNqN/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.ou80JUKNqN/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 295983793 > /tmp/nxf.ou80JUKNqN/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.ou80JUKNqN/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.ou80JUKNqN/ctat_genome_lib_build_dir > /tmp/nxf.ou80JUKNqN/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.ou80JUKNqN/ctat_genome_lib_build_dir --annotate /tmp/nxf.ou80JUKNqN/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.ou80JUKNqN/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.ou80JUKNqN/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.ou80JUKNqN/ctat_genome_lib_build_dir
-done, see /tmp/nxf.ou80JUKNqN/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.ou80JUKNqN/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.ou80JUKNqN/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 2308, filtered: 13152)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.ou80JUKNqN/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.ou80JUKNqN/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.ou80JUKNqN/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [ENSG00000258853.1]
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WARNING, no entry stored in dbm for [ENSG00000272008.1]
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WARNING, no entry stored in dbm for [ENSG00000229807.12]
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WARNING, no entry stored in dbm for [ENSG00000280828.1]
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WARNING, no entry stored in dbm for [ENSG00000262801.6]
WARNING, no entry stored in dbm for [ENSG00000245958.6]
WARNING, no entry stored in dbm for [ENSG00000234297.2]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000253541.1]
WARNING, no entry stored in dbm for [ENSG00000225752.1]
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WARNING, no entry stored in dbm for [ENSG00000236930.1]
WARNING, no entry stored in dbm for [ENSG00000185986.12]
WARNING, no entry stored in dbm for [ENSG00000188002.10]
WARNING, no entry stored in dbm for [ENSG00000215837.7]
WARNING, no entry stored in dbm for [ENSG00000283426.1]
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WARNING, no entry stored in dbm for [ENSG00000260573.4]
WARNING, no entry stored in dbm for [ENSG00000233071.3]
WARNING, no entry stored in dbm for [ENSG00000213621.3]
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WARNING, no entry stored in dbm for [ENSG00000243101.1]
WARNING, no entry stored in dbm for [ENSG00000219755.1]
WARNING, no entry stored in dbm for [ENSG00000226132.1]
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WARNING, no entry stored in dbm for [ENSG00000215236.3]
WARNING, no entry stored in dbm for [ENSG00000242899.1]
WARNING, no entry stored in dbm for [ENSG00000214485.6]
WARNING, no entry stored in dbm for [ENSG00000277448.1]
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WARNING, no entry stored in dbm for [ENSG00000184319.16]
WARNING, no entry stored in dbm for [ENSG00000215002.2]
WARNING, no entry stored in dbm for [ENSG00000269244.1]
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WARNING, no entry stored in dbm for [ENSG00000262898.3]
WARNING, no entry stored in dbm for [ENSG00000239199.1]
WARNING, no entry stored in dbm for [ENSG00000215063.3]
WARNING, no entry stored in dbm for [ENSG00000230853.1]
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WARNING, no entry stored in dbm for [ENSG00000244691.1]
WARNING, no entry stored in dbm for [ENSG00000240418.1]
WARNING, no entry stored in dbm for [ENSG00000200156.1]
WARNING, no entry stored in dbm for [ENSG00000202412.1]
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WARNING, no entry stored in dbm for [ENSG00000222355.1]
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WARNING, no entry stored in dbm for [ENSG00000231170.7]
WARNING, no entry stored in dbm for [ENSG00000240877.3]
WARNING, no entry stored in dbm for [ENSG00000244112.3]
WARNING, no entry stored in dbm for [ENSG00000230474.1]
WARNING, no entry stored in dbm for [ENSG00000203711.14]
WARNING, no entry stored in dbm for [ENSG00000233014.1]
WARNING, no entry stored in dbm for [ENSG00000265041.1]
WARNING, no entry stored in dbm for [ENSG00000244510.2]
WARNING, no entry stored in dbm for [ENSG00000228143.2]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000255197.6]
WARNING, no entry stored in dbm for [ENSG00000279220.4]
WARNING, no entry stored in dbm for [ENSG00000269012.2]
WARNING, no entry stored in dbm for [ENSG00000204261.9]
WARNING, no entry stored in dbm for [ENSG00000272168.8]
WARNING, no entry stored in dbm for [ENSG00000203739.4]
WARNING, no entry stored in dbm for [ENSG00000214178.3]
WARNING, no entry stored in dbm for [ENSG00000286641.1]
WARNING, no entry stored in dbm for [ENSG00000205578.6]
WARNING, no entry stored in dbm for [ENSG00000237468.2]
WARNING, no entry stored in dbm for [ENSG00000270069.1]
WARNING, no entry stored in dbm for [ENSG00000261319.1]
WARNING, no entry stored in dbm for [ENSG00000187953.10]
WARNING, no entry stored in dbm for [ENSG00000255401.1]
WARNING, no entry stored in dbm for [ENSG00000273129.2]
WARNING, no entry stored in dbm for [ENSG00000236508.1]
WARNING, no entry stored in dbm for [ENSG00000274602.5]
WARNING, no entry stored in dbm for [ENSG00000185485.14]
WARNING, no entry stored in dbm for [ENSG00000173209.23]
WARNING, no entry stored in dbm for [ENSG00000250934.2]
WARNING, no entry stored in dbm for [ENSG00000260528.5]
WARNING, no entry stored in dbm for [ENSG00000261153.2]
WARNING, no entry stored in dbm for [ENSG00000285094.1]
WARNING, no entry stored in dbm for [ENSG00000224397.7]
WARNING, no entry stored in dbm for [ENSG00000287277.1]
WARNING, no entry stored in dbm for [ENSG00000272150.5]
WARNING, no entry stored in dbm for [ENSG00000260017.1]
WARNING, no entry stored in dbm for [ENSG00000203799.13]
WARNING, no entry stored in dbm for [ENSG00000239883.8]
WARNING, no entry stored in dbm for [ENSG00000267270.6]
WARNING, no entry stored in dbm for [ENSG00000267002.4]
WARNING, no entry stored in dbm for [ENSG00000285709.1]
WARNING, no entry stored in dbm for [ENSG00000237272.2]
WARNING, no entry stored in dbm for [ENSG00000228960.6]
WARNING, no entry stored in dbm for [ENSG00000239967.1]
WARNING, no entry stored in dbm for [ENSG00000259324.2]
WARNING, no entry stored in dbm for [ENSG00000286830.1]
WARNING, no entry stored in dbm for [ENSG00000242299.1]
WARNING, no entry stored in dbm for [ENSG00000251593.1]
WARNING, no entry stored in dbm for [ENSG00000247556.6]
WARNING, no entry stored in dbm for [ENSG00000251199.6]
WARNING, no entry stored in dbm for [ENSG00000281903.2]
WARNING, no entry stored in dbm for [ENSG00000196796.5]
WARNING, no entry stored in dbm for [ENSG00000267143.1]
WARNING, no entry stored in dbm for [ENSG00000286678.1]
WARNING, no entry stored in dbm for [ENSG00000267287.1]
WARNING, no entry stored in dbm for [ENSG00000217767.2]
WARNING, no entry stored in dbm for [ENSG00000267749.1]
WARNING, no entry stored in dbm for [ENSG00000234318.1]
WARNING, no entry stored in dbm for [ENSG00000271086.7]
WARNING, no entry stored in dbm for [ENSG00000275374.1]
WARNING, no entry stored in dbm for [ENSG00000275642.1]
WARNING, no entry stored in dbm for [ENSG00000274680.1]
WARNING, no entry stored in dbm for [ENSG00000261711.6]
WARNING, no entry stored in dbm for [ENSG00000226029.1]
WARNING, no entry stored in dbm for [ENSG00000236051.7]
WARNING, no entry stored in dbm for [ENSG00000228323.2]
WARNING, no entry stored in dbm for [ENSG00000283426.1]
WARNING, no entry stored in dbm for [ENSG00000185485.14]
WARNING, no entry stored in dbm for [ENSG00000264697.1]
WARNING, no entry stored in dbm for [ENSG00000210135.1]
WARNING, no entry stored in dbm for [ENSG00000214955.5]
WARNING, no entry stored in dbm for [ENSG00000286215.1]
WARNING, no entry stored in dbm for [ENSG00000078319.10]
WARNING, no entry stored in dbm for [ENSG00000283805.1]
WARNING, no entry stored in dbm for [ENSG00000172965.17]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [ENSG00000261738.7]
WARNING, no entry stored in dbm for [ENSG00000228526.7]
WARNING, no entry stored in dbm for [ENSG00000253522.6]
WARNING, no entry stored in dbm for [ENSG00000244625.7]
WARNING, no entry stored in dbm for [ENSG00000234851.4]
WARNING, no entry stored in dbm for [ENSG00000196312.15]
WARNING, no entry stored in dbm for [ENSG00000259692.6]
WARNING, no entry stored in dbm for [ENSG00000229391.7]
WARNING, no entry stored in dbm for [ENSG00000225746.13]
WARNING, no entry stored in dbm for [ENSG00000242326.1]
WARNING, no entry stored in dbm for [ENSG00000231689.2]
WARNING, no entry stored in dbm for [ENSG00000274594.1]
WARNING, no entry stored in dbm for [ENSG00000240288.8]
WARNING, no entry stored in dbm for [ENSG00000231312.7]
WARNING, no entry stored in dbm for [ENSG00000248323.7]
WARNING, no entry stored in dbm for [ENSG00000230876.8]
WARNING, no entry stored in dbm for [ENSG00000286481.1]
WARNING, no entry stored in dbm for [ENSG00000207441.1]
WARNING, no entry stored in dbm for [ENSG00000251129.2]
WARNING, no entry stored in dbm for [ENSG00000256268.2]
WARNING, no entry stored in dbm for [ENSG00000248810.2]
WARNING, no entry stored in dbm for [ENSG00000256582.1]
WARNING, no entry stored in dbm for [ENSG00000255693.3]
WARNING, no entry stored in dbm for [ENSG00000257259.3]
WARNING, no entry stored in dbm for [ENSG00000260423.2]
WARNING, no entry stored in dbm for [ENSG00000250127.1]
WARNING, no entry stored in dbm for [ENSG00000230102.8]
WARNING, no entry stored in dbm for [ENSG00000224910.2]
WARNING, no entry stored in dbm for [ENSG00000255171.7]
WARNING, no entry stored in dbm for [ENSG00000224017.2]
WARNING, no entry stored in dbm for [ENSG00000236204.6]
WARNING, no entry stored in dbm for [ENSG00000281769.1]
WARNING, no entry stored in dbm for [ENSG00000229563.7]
WARNING, no entry stored in dbm for [ENSG00000232827.3]
WARNING, no entry stored in dbm for [ENSG00000250634.6]
WARNING, no entry stored in dbm for [ENSG00000253819.2]
WARNING, no entry stored in dbm for [ENSG00000255364.1]
WARNING, no entry stored in dbm for [ENSG00000228794.10]
WARNING, no entry stored in dbm for [ENSG00000204588.5]
WARNING, no entry stored in dbm for [ENSG00000233723.9]
WARNING, no entry stored in dbm for [ENSG00000224577.3]
WARNING, no entry stored in dbm for [ENSG00000224577.3]
WARNING, no entry stored in dbm for [ENSG00000249307.7]
WARNING, no entry stored in dbm for [ENSG00000204054.14]
WARNING, no entry stored in dbm for [ENSG00000235703.6]
WARNING, no entry stored in dbm for [ENSG00000231419.6]
WARNING, no entry stored in dbm for [ENSG00000237854.3]
WARNING, no entry stored in dbm for [ENSG00000261824.7]
WARNING, no entry stored in dbm for [ENSG00000259129.6]
WARNING, no entry stored in dbm for [ENSG00000233208.6]
WARNING, no entry stored in dbm for [ENSG00000231028.9]
WARNING, no entry stored in dbm for [ENSG00000267722.1]
WARNING, no entry stored in dbm for [ENSG00000235972.1]
WARNING, no entry stored in dbm for [ENSG00000280415.1]
WARNING, no entry stored in dbm for [ENSG00000233930.4]
WARNING, no entry stored in dbm for [ENSG00000286948.1]
WARNING, no entry stored in dbm for [ENSG00000233930.4]
WARNING, no entry stored in dbm for [ENSG00000286948.1]
WARNING, no entry stored in dbm for [ENSG00000233652.1]
WARNING, no entry stored in dbm for [ENSG00000267688.1]
WARNING, no entry stored in dbm for [ENSG00000237978.6]
WARNING, no entry stored in dbm for [ENSG00000229127.2]
WARNING, no entry stored in dbm for [ENSG00000225470.8]
WARNING, no entry stored in dbm for [ENSG00000271538.6]
WARNING, no entry stored in dbm for [ENSG00000180846.8]
WARNING, no entry stored in dbm for [ENSG00000235257.9]
WARNING, no entry stored in dbm for [ENSG00000235522.6]
WARNING, no entry stored in dbm for [ENSG00000254034.2]
WARNING, no entry stored in dbm for [ENSG00000245954.8]
WARNING, no entry stored in dbm for [ENSG00000227492.2]
WARNING, no entry stored in dbm for [ENSG00000258535.1]
WARNING, no entry stored in dbm for [ENSG00000226965.2]
WARNING, no entry stored in dbm for [ENSG00000253732.1]
WARNING, no entry stored in dbm for [ENSG00000250584.3]
WARNING, no entry stored in dbm for [ENSG00000227733.10]
WARNING, no entry stored in dbm for [ENSG00000227000.2]
WARNING, no entry stored in dbm for [ENSG00000183199.6]
WARNING, no entry stored in dbm for [ENSG00000233805.1]
WARNING, no entry stored in dbm for [ENSG00000251557.2]
WARNING, no entry stored in dbm for [ENSG00000234491.1]
WARNING, no entry stored in dbm for [ENSG00000250891.2]
WARNING, no entry stored in dbm for [ENSG00000231471.1]
WARNING, no entry stored in dbm for [ENSG00000232916.1]
WARNING, no entry stored in dbm for [ENSG00000204622.11]
WARNING, no entry stored in dbm for [ENSG00000225851.1]
WARNING, no entry stored in dbm for [ENSG00000259856.1]
WARNING, no entry stored in dbm for [ENSG00000244313.3]
WARNING, no entry stored in dbm for [ENSG00000244502.2]
WARNING, no entry stored in dbm for [ENSG00000248205.1]
WARNING, no entry stored in dbm for [ENSG00000246174.9]
WARNING, no entry stored in dbm for [ENSG00000267458.1]
WARNING, no entry stored in dbm for [ENSG00000247271.7]
WARNING, no entry stored in dbm for [ENSG00000266433.6]
WARNING, no entry stored in dbm for [ENSG00000229608.1]
WARNING, no entry stored in dbm for [ENSG00000239533.6]
WARNING, no entry stored in dbm for [ENSG00000280347.1]
WARNING, no entry stored in dbm for [ENSG00000230551.4]
WARNING, no entry stored in dbm for [ENSG00000231131.8]
WARNING, no entry stored in dbm for [ENSG00000248092.8]
WARNING, no entry stored in dbm for [ENSG00000287812.1]
WARNING, no entry stored in dbm for [ENSG00000267519.6]
WARNING, no entry stored in dbm for [ENSG00000246695.8]
WARNING, no entry stored in dbm for [ENSG00000278434.1]
WARNING, no entry stored in dbm for [ENSG00000234741.8]
WARNING, no entry stored in dbm for [ENSG00000241640.2]
WARNING, no entry stored in dbm for [ENSG00000235016.1]
WARNING, no entry stored in dbm for [ENSG00000205634.7]
WARNING, no entry stored in dbm for [ENSG00000260937.6]
WARNING, no entry stored in dbm for [ENSG00000230590.11]
WARNING, no entry stored in dbm for [ENSG00000234975.6]
WARNING, no entry stored in dbm for [ENSG00000218213.1]
WARNING, no entry stored in dbm for [ENSG00000231646.6]
WARNING, no entry stored in dbm for [ENSG00000287129.1]
WARNING, no entry stored in dbm for [ENSG00000231646.6]
WARNING, no entry stored in dbm for [ENSG00000287129.1]
WARNING, no entry stored in dbm for [ENSG00000249738.10]
WARNING, no entry stored in dbm for [ENSG00000279035.1]
WARNING, no entry stored in dbm for [ENSG00000225465.10]
WARNING, no entry stored in dbm for [ENSG00000124835.2]
WARNING, no entry stored in dbm for [ENSG00000244097.1]
WARNING, no entry stored in dbm for [ENSG00000227014.6]
WARNING, no entry stored in dbm for [ENSG00000269736.1]
WARNING, no entry stored in dbm for [ENSG00000088340.17]
WARNING, no entry stored in dbm for [ENSG00000251593.1]
WARNING, no entry stored in dbm for [ENSG00000226314.8]
WARNING, no entry stored in dbm for [ENSG00000244026.6]
WARNING, no entry stored in dbm for [ENSG00000244026.6]
WARNING, no entry stored in dbm for [ENSG00000244026.6]
WARNING, no entry stored in dbm for [ENSG00000226312.7]
WARNING, no entry stored in dbm for [ENSG00000255052.5]
WARNING, no entry stored in dbm for [ENSG00000254016.3]
WARNING, no entry stored in dbm for [ENSG00000244383.2]
WARNING, no entry stored in dbm for [ENSG00000286275.1]
WARNING, no entry stored in dbm for [ENSG00000229847.9]
WARNING, no entry stored in dbm for [ENSG00000233579.1]
WARNING, no entry stored in dbm for [ENSG00000233442.2]
WARNING, no entry stored in dbm for [ENSG00000234152.1]
WARNING, no entry stored in dbm for [ENSG00000258913.2]
WARNING, no entry stored in dbm for [ENSG00000224594.2]
WARNING, no entry stored in dbm for [ENSG00000264112.1]
WARNING, no entry stored in dbm for [ENSG00000250442.1]
WARNING, no entry stored in dbm for [ENSG00000286681.1]
WARNING, no entry stored in dbm for [ENSG00000257510.2]
WARNING, no entry stored in dbm for [ENSG00000230239.1]
WARNING, no entry stored in dbm for [ENSG00000251027.2]
WARNING, no entry stored in dbm for [ENSG00000228415.3]
WARNING, no entry stored in dbm for [ENSG00000228666.1]
WARNING, no entry stored in dbm for [ENSG00000204121.2]
WARNING, no entry stored in dbm for [ENSG00000228343.1]
WARNING, no entry stored in dbm for [ENSG00000257222.1]
WARNING, no entry stored in dbm for [ENSG00000286553.1]
WARNING, no entry stored in dbm for [ENSG00000182397.14]
WARNING, no entry stored in dbm for [ENSG00000205913.7]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000262001.1]
WARNING, no entry stored in dbm for [ENSG00000231607.13]
WARNING, no entry stored in dbm for [ENSG00000233287.1]
WARNING, no entry stored in dbm for [ENSG00000254275.6]
WARNING, no entry stored in dbm for [ENSG00000286867.1]
WARNING, no entry stored in dbm for [ENSG00000176728.10]
WARNING, no entry stored in dbm for [ENSG00000216516.1]
WARNING, no entry stored in dbm for [ENSG00000196810.5]
WARNING, no entry stored in dbm for [ENSG00000250635.1]
WARNING, no entry stored in dbm for [ENSG00000231074.9]
WARNING, no entry stored in dbm for [ENSG00000288531.1]
WARNING, no entry stored in dbm for [ENSG00000288262.1]
WARNING, no entry stored in dbm for [ENSG00000276710.4]
WARNING, no entry stored in dbm for [ENSG00000258471.2]
WARNING, no entry stored in dbm for [ENSG00000242193.11]
WARNING, no entry stored in dbm for [ENSG00000272008.1]
WARNING, no entry stored in dbm for [ENSG00000264063.1]
WARNING, no entry stored in dbm for [ENSG00000270533.2]
WARNING, no entry stored in dbm for [ENSG00000240991.3]
WARNING, no entry stored in dbm for [ENSG00000280721.1]
WARNING, no entry stored in dbm for [ENSG00000247950.7]
WARNING, no entry stored in dbm for [ENSG00000283541.1]
WARNING, no entry stored in dbm for [ENSG00000278969.1]
WARNING, no entry stored in dbm for [ENSG00000258278.2]
WARNING, no entry stored in dbm for [ENSG00000237480.3]
WARNING, no entry stored in dbm for [ENSG00000246174.9]
WARNING, no entry stored in dbm for [ENSG00000285051.2]
WARNING, no entry stored in dbm for [ENSG00000285051.2]
WARNING, no entry stored in dbm for [ENSG00000272888.7]
WARNING, no entry stored in dbm for [ENSG00000205763.13]
WARNING, no entry stored in dbm for [ENSG00000252549.1]
WARNING, no entry stored in dbm for [ENSG00000234135.2]
WARNING, no entry stored in dbm for [ENSG00000215039.7]
WARNING, no entry stored in dbm for [ENSG00000183444.10]
WARNING, no entry stored in dbm for [ENSG00000258561.2]
WARNING, no entry stored in dbm for [ENSG00000228544.1]
WARNING, no entry stored in dbm for [ENSG00000203799.13]
WARNING, no entry stored in dbm for [ENSG00000249375.8]
WARNING, no entry stored in dbm for [ENSG00000226800.5]
WARNING, no entry stored in dbm for [ENSG00000234996.4]
WARNING, no entry stored in dbm for [ENSG00000234420.7]
WARNING, no entry stored in dbm for [ENSG00000234420.7]
WARNING, no entry stored in dbm for [ENSG00000225873.4]
WARNING, no entry stored in dbm for [ENSG00000221953.5]
WARNING, no entry stored in dbm for [ENSG00000280341.1]
WARNING, no entry stored in dbm for [ENSG00000279954.1]
WARNING, no entry stored in dbm for [ENSG00000244342.5]
WARNING, no entry stored in dbm for [ENSG00000270025.2]
WARNING, no entry stored in dbm for [ENSG00000243289.1]
WARNING, no entry stored in dbm for [ENSG00000204177.10]
WARNING, no entry stored in dbm for [ENSG00000281566.3]
WARNING, no entry stored in dbm for [ENSG00000254560.6]
WARNING, no entry stored in dbm for [ENSG00000261273.1]
WARNING, no entry stored in dbm for [ENSG00000184809.13]
WARNING, no entry stored in dbm for [ENSG00000253502.1]
WARNING, no entry stored in dbm for [ENSG00000205534.6]
WARNING, no entry stored in dbm for [ENSG00000255355.1]
WARNING, no entry stored in dbm for [ENSG00000235919.4]
WARNING, no entry stored in dbm for [ENSG00000244198.7]
WARNING, no entry stored in dbm for [ENSG00000244198.7]
WARNING, no entry stored in dbm for [ENSG00000231312.7]
WARNING, no entry stored in dbm for [ENSG00000187172.15]
WARNING, no entry stored in dbm for [ENSG00000260451.1]
WARNING, no entry stored in dbm for [ENSG00000282572.2]
WARNING, no entry stored in dbm for [ENSG00000254044.5]
WARNING, no entry stored in dbm for [ENSG00000254682.1]
WARNING, no entry stored in dbm for [ENSG00000264964.2]
WARNING, no entry stored in dbm for [ENSG00000234034.1]
WARNING, no entry stored in dbm for [ENSG00000256625.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000266931.2]
WARNING, no entry stored in dbm for [ENSG00000234712.1]
WARNING, no entry stored in dbm for [ENSG00000285799.1]
WARNING, no entry stored in dbm for [ENSG00000254741.1]
WARNING, no entry stored in dbm for [ENSG00000284740.1]
WARNING, no entry stored in dbm for [ENSG00000275046.1]
WARNING, no entry stored in dbm for [ENSG00000286548.1]
WARNING, no entry stored in dbm for [ENSG00000242861.1]
WARNING, no entry stored in dbm for [ENSG00000223811.1]
WARNING, no entry stored in dbm for [ENSG00000269896.2]
WARNING, no entry stored in dbm for [ENSG00000283480.1]
WARNING, no entry stored in dbm for [ENSG00000231754.2]
WARNING, no entry stored in dbm for [ENSG00000271943.2]
WARNING, no entry stored in dbm for [ENSG00000287404.1]
WARNING, no entry stored in dbm for [ENSG00000226409.3]
WARNING, no entry stored in dbm for [ENSG00000285691.2]
WARNING, no entry stored in dbm for [ENSG00000228940.1]
WARNING, no entry stored in dbm for [ENSG00000237445.2]
WARNING, no entry stored in dbm for [ENSG00000249353.2]
WARNING, no entry stored in dbm for [ENSG00000217030.1]
WARNING, no entry stored in dbm for [ENSG00000244048.1]
WARNING, no entry stored in dbm for [ENSG00000241494.1]
WARNING, no entry stored in dbm for [ENSG00000229143.1]
WARNING, no entry stored in dbm for [ENSG00000278390.5]
WARNING, no entry stored in dbm for [ENSG00000286811.1]
WARNING, no entry stored in dbm for [ENSG00000288583.1]
WARNING, no entry stored in dbm for [ENSG00000287368.1]
WARNING, no entry stored in dbm for [ENSG00000230490.3]
WARNING, no entry stored in dbm for [ENSG00000262619.2]
WARNING, no entry stored in dbm for [ENSG00000258028.3]
WARNING, no entry stored in dbm for [ENSG00000258493.2]
WARNING, no entry stored in dbm for [ENSG00000243659.1]
WARNING, no entry stored in dbm for [ENSG00000279267.1]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000258949.1]
WARNING, no entry stored in dbm for [ENSG00000288010.1]
WARNING, no entry stored in dbm for [ENSG00000280434.1]
WARNING, no entry stored in dbm for [ENSG00000285690.1]
WARNING, no entry stored in dbm for [ENSG00000285690.1]
WARNING, no entry stored in dbm for [ENSG00000206066.3]
WARNING, no entry stored in dbm for [ENSG00000230637.2]
WARNING, no entry stored in dbm for [ENSG00000287920.1]
WARNING, no entry stored in dbm for [ENSG00000261420.1]
WARNING, no entry stored in dbm for [ENSG00000237298.10]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000223959.8]
WARNING, no entry stored in dbm for [ENSG00000231965.4]
WARNING, no entry stored in dbm for [ENSG00000212664.5]
WARNING, no entry stored in dbm for [ENSG00000218052.5]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000275557.1]
WARNING, no entry stored in dbm for [ENSG00000274423.1]
WARNING, no entry stored in dbm for [ENSG00000278182.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000232729.8]
WARNING, no entry stored in dbm for [ENSG00000232729.8]
WARNING, no entry stored in dbm for [ENSG00000232729.8]
WARNING, no entry stored in dbm for [ENSG00000232729.8]
WARNING, no entry stored in dbm for [ENSG00000261760.8]
WARNING, no entry stored in dbm for [ENSG00000230596.3]
WARNING, no entry stored in dbm for [ENSG00000254701.3]
WARNING, no entry stored in dbm for [ENSG00000261404.7]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000238035.8]
WARNING, no entry stored in dbm for [ENSG00000257252.6]
WARNING, no entry stored in dbm for [ENSG00000274751.1]
WARNING, no entry stored in dbm for [ENSG00000237961.4]
WARNING, no entry stored in dbm for [ENSG00000278931.1]
WARNING, no entry stored in dbm for [ENSG00000284675.1]
WARNING, no entry stored in dbm for [ENSG00000287463.1]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000249951.1]
WARNING, no entry stored in dbm for [ENSG00000249679.2]
WARNING, no entry stored in dbm for [ENSG00000249706.1]
WARNING, no entry stored in dbm for [ENSG00000267257.1]
WARNING, no entry stored in dbm for [ENSG00000265844.1]
WARNING, no entry stored in dbm for [ENSG00000234287.1]
WARNING, no entry stored in dbm for [ENSG00000228303.1]
WARNING, no entry stored in dbm for [ENSG00000259976.3]
WARNING, no entry stored in dbm for [ENSG00000284687.1]
WARNING, no entry stored in dbm for [ENSG00000287860.1]
WARNING, no entry stored in dbm for [ENSG00000282057.1]
WARNING, no entry stored in dbm for [ENSG00000239268.3]
WARNING, no entry stored in dbm for [ENSG00000268362.6]
WARNING, no entry stored in dbm for [ENSG00000260290.2]
WARNING, no entry stored in dbm for [ENSG00000267749.1]
WARNING, no entry stored in dbm for [ENSG00000244559.1]
WARNING, no entry stored in dbm for [ENSG00000237550.5]
WARNING, no entry stored in dbm for [ENSG00000261392.1]
WARNING, no entry stored in dbm for [ENSG00000272941.1]
WARNING, no entry stored in dbm for [ENSG00000242536.2]
WARNING, no entry stored in dbm for [ENSG00000279917.1]
WARNING, no entry stored in dbm for [ENSG00000250031.1]
WARNING, no entry stored in dbm for [ENSG00000242299.1]
WARNING, no entry stored in dbm for [ENSG00000234129.8]
WARNING, no entry stored in dbm for [ENSG00000250938.6]
WARNING, no entry stored in dbm for [ENSG00000273257.2]
WARNING, no entry stored in dbm for [ENSG00000261687.1]
WARNING, no entry stored in dbm for [ENSG00000197099.8]
WARNING, no entry stored in dbm for [ENSG00000283674.3]
WARNING, no entry stored in dbm for [ENSG00000247765.2]
WARNING, no entry stored in dbm for [ENSG00000258590.5]
WARNING, no entry stored in dbm for [ENSG00000254248.1]
WARNING, no entry stored in dbm for [ENSG00000266962.2]
WARNING, no entry stored in dbm for [ENSG00000286275.1]
WARNING, no entry stored in dbm for [ENSG00000287721.1]
WARNING, no entry stored in dbm for [ENSG00000256389.2]
WARNING, no entry stored in dbm for [ENSG00000250031.1]
WARNING, no entry stored in dbm for [ENSG00000272518.1]
WARNING, no entry stored in dbm for [ENSG00000256361.1]
WARNING, no entry stored in dbm for [ENSG00000260457.2]
WARNING, no entry stored in dbm for [ENSG00000260693.1]
WARNING, no entry stored in dbm for [ENSG00000188388.10]
WARNING, no entry stored in dbm for [ENSG00000242327.1]
WARNING, no entry stored in dbm for [ENSG00000238166.2]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000242338.6]
WARNING, no entry stored in dbm for [ENSG00000248898.3]
WARNING, no entry stored in dbm for [ENSG00000267169.2]
WARNING, no entry stored in dbm for [ENSG00000268516.2]
WARNING, no entry stored in dbm for [ENSG00000259560.2]
WARNING, no entry stored in dbm for [ENSG00000259198.1]
WARNING, no entry stored in dbm for [ENSG00000259198.1]
WARNING, no entry stored in dbm for [ENSG00000237214.3]
WARNING, no entry stored in dbm for [ENSG00000281896.1]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000267000.1]
WARNING, no entry stored in dbm for [ENSG00000213293.4]
WARNING, no entry stored in dbm for [ENSG00000214748.2]
WARNING, no entry stored in dbm for [ENSG00000232098.3]
WARNING, no entry stored in dbm for [ENSG00000268573.1]
WARNING, no entry stored in dbm for [ENSG00000257890.1]
WARNING, no entry stored in dbm for [ENSG00000267723.1]
WARNING, no entry stored in dbm for [ENSG00000243829.1]
WARNING, no entry stored in dbm for [ENSG00000197813.6]
WARNING, no entry stored in dbm for [ENSG00000197813.6]
WARNING, no entry stored in dbm for [ENSG00000249839.1]
WARNING, no entry stored in dbm for [ENSG00000286481.1]
WARNING, no entry stored in dbm for [ENSG00000257696.1]
WARNING, no entry stored in dbm for [ENSG00000259952.1]
WARNING, no entry stored in dbm for [ENSG00000243697.1]
WARNING, no entry stored in dbm for [ENSG00000284649.1]
WARNING, no entry stored in dbm for [ENSG00000284671.1]
WARNING, no entry stored in dbm for [ENSG00000260905.1]
WARNING, no entry stored in dbm for [ENSG00000284671.1]
WARNING, no entry stored in dbm for [ENSG00000287263.1]
WARNING, no entry stored in dbm for [ENSG00000248733.1]
WARNING, no entry stored in dbm for [ENSG00000253512.1]
WARNING, no entry stored in dbm for [ENSG00000267213.4]
WARNING, no entry stored in dbm for [ENSG00000255185.6]
WARNING, no entry stored in dbm for [ENSG00000236886.2]
WARNING, no entry stored in dbm for [ENSG00000266248.1]
WARNING, no entry stored in dbm for [ENSG00000238165.1]
WARNING, no entry stored in dbm for [ENSG00000238041.3]
WARNING, no entry stored in dbm for [ENSG00000237513.2]
WARNING, no entry stored in dbm for [ENSG00000277458.1]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000282022.1]
WARNING, no entry stored in dbm for [ENSG00000267191.2]
WARNING, no entry stored in dbm for [ENSG00000286376.1]
WARNING, no entry stored in dbm for [ENSG00000273218.1]
WARNING, no entry stored in dbm for [ENSG00000274712.2]
WARNING, no entry stored in dbm for [ENSG00000274712.2]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000241057.2]
WARNING, no entry stored in dbm for [ENSG00000272655.2]
WARNING, no entry stored in dbm for [ENSG00000241057.2]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000241057.2]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000241057.2]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000254610.3]
WARNING, no entry stored in dbm for [ENSG00000286305.1]
WARNING, no entry stored in dbm for [ENSG00000244560.7]
WARNING, no entry stored in dbm for [ENSG00000228204.2]
WARNING, no entry stored in dbm for [ENSG00000267304.1]
WARNING, no entry stored in dbm for [ENSG00000228113.7]
WARNING, no entry stored in dbm for [ENSG00000250318.1]
WARNING, no entry stored in dbm for [ENSG00000262265.2]
WARNING, no entry stored in dbm for [ENSG00000277526.5]
WARNING, no entry stored in dbm for [ENSG00000237959.1]
WARNING, no entry stored in dbm for [ENSG00000251595.7]
WARNING, no entry stored in dbm for [ENSG00000251595.7]


	* STAR-Fusion complete.  See output: /tmp/nxf.ou80JUKNqN/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)