Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e6/33afafac74c3a090289a821c27d944/659_dm4-T1-TRNA-1_B23WHTKLT4_1_1.fastp.fastq.gz Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/30/e3ef4abfea1ea02d0e7bb6a3018a36/.command.sh Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/30/0fa1410f6de38afdc58d88b3adedf7/659_dm4-T1-TRNA-1_B23WHTKLT4_1.Chimeric.out.junction Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/30/e3ef4abfea1ea02d0e7bb6a3018a36/.command.run Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e6/33afafac74c3a090289a821c27d944/659_dm4-T1-TRNA-1_B23WHTKLT4_1_2.fastp.fastq.gz ==> STAGING COMPLETE (6 inputs) -ctat genome lib [/tmp/nxf.DFis1kKwbz/ctat_genome_lib_build_dir] validates. CMD: mkdir -p /tmp/nxf.DFis1kKwbz/./_starF_checkpoints CMD: mkdir -p /tmp/nxf.DFis1kKwbz/./star-fusion.preliminary -sample contains 102160001 rnaseq fragments * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.DFis1kKwbz/ctat_genome_lib_build_dir -J /tmp/nxf.DFis1kKwbz/659_dm4-T1-TRNA-1_B23WHTKLT4_1.Chimeric.out.junction -O /tmp/nxf.DFis1kKwbz/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 -parsing fusion evidence: /tmp/nxf.DFis1kKwbz/659_dm4-T1-TRNA-1_B23WHTKLT4_1.Chimeric.out.junction -building interval tree based on /tmp/nxf.DFis1kKwbz/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.10 min). -mapping reads to genes [10000], rate=100000.00/min [20000], rate=46153.85/min [30000], rate=36734.69/min [40000], rate=35820.90/min [50000], rate=34883.72/min [60000], rate=35294.12/min [70000], rate=35294.12/min [80000], rate=35820.90/min [90000], rate=36486.49/min [100000], rate=37037.04/min [110000], rate=37500.00/min [120000], rate=38095.24/min [130000], rate=38805.97/min [140000], rate=39436.62/min [150000], rate=40000.00/min [160000], rate=40677.97/min [170000], rate=41463.41/min [180000], rate=42187.50/min [190000], rate=42696.63/min [200000], rate=43321.30/min [210000], rate=43902.44/min [220000], rate=44745.76/min [230000], rate=45695.36/min [240000], rate=46601.94/min [250000], rate=47619.05/min [260000], rate=48598.13/min [270000], rate=49693.25/min [280000], rate=50149.25/min [290000], rate=50581.40/min [300000], rate=51136.36/min [310000], rate=51810.58/min [320000], rate=52602.74/min [330000], rate=53225.81/min [340000], rate=53825.86/min [350000], rate=54687.50/min [360000], rate=55526.99/min [370000], rate=56777.49/min [380000], rate=57868.02/min [390000], rate=58942.07/min [400000], rate=59553.35/min [410000], rate=60740.74/min [420000], rate=62222.22/min [430000], rate=63546.80/min [440000], rate=64864.86/min [450000], rate=66176.47/min [460000], rate=67481.66/min [470000], rate=68948.66/min [480000], rate=69902.91/min [490000], rate=70503.60/min [500000], rate=71258.91/min [510000], rate=72340.43/min [520000], rate=73067.92/min [530000], rate=73953.49/min [540000], rate=75000.00/min [550000], rate=75514.87/min [560000], rate=76190.48/min [570000], rate=77200.90/min [580000], rate=78378.38/min [590000], rate=79550.56/min [600000], rate=80717.49/min [610000], rate=81333.33/min [620000], rate=81938.33/min [630000], rate=82173.91/min [640000], rate=82580.65/min [650000], rate=83155.65/min [660000], rate=84255.32/min [670000], rate=85531.91/min [680000], rate=86624.20/min [690000], rate=87711.86/min [700000], rate=88794.93/min [710000], rate=90063.42/min [720000], rate=91139.24/min [730000], rate=91250.00/min [740000], rate=91358.02/min [750000], rate=91649.69/min [760000], rate=91750.50/min [770000], rate=92031.87/min [780000], rate=91944.99/min [790000], rate=91860.47/min [800000], rate=91603.05/min [810000], rate=91525.42/min [820000], rate=91620.11/min [830000], rate=91544.12/min [840000], rate=92138.94/min [850000], rate=92558.98/min [860000], rate=92805.76/min [870000], rate=92882.56/min [880000], rate=92957.75/min [890000], rate=93031.36/min [900000], rate=93103.45/min [910000], rate=91764.71/min [920000], rate=90640.39/min [930000], rate=89423.08/min [940000], rate=88262.91/min [950000], rate=87289.43/min [960000], rate=85970.15/min [970000], rate=85337.24/min [980000], rate=84848.48/min [990000], rate=84255.32/min [1000000], rate=83682.01/min [1010000], rate=83241.76/min [1020000], rate=82814.61/min [1030000], rate=82510.01/min [1040000], rate=82321.90/min [1050000], rate=82245.43/min -building interval tree based on /tmp/nxf.DFis1kKwbz/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.10 min). -mapping reads to genes [10000], rate=85714.29/min [20000], rate=70588.24/min [30000], rate=62068.97/min [40000], rate=52173.91/min [50000], rate=46153.85/min [60000], rate=46153.85/min [70000], rate=47727.27/min [80000], rate=48484.85/min [90000], rate=49541.28/min [100000], rate=50847.46/min [110000], rate=52800.00/min [120000], rate=54545.45/min [130000], rate=56115.11/min [140000], rate=57142.86/min [150000], rate=55900.62/min [160000], rate=55172.41/min [170000], rate=54545.45/min [180000], rate=54271.36/min [190000], rate=54028.44/min [200000], rate=54298.64/min [210000], rate=54545.45/min [220000], rate=55462.18/min [230000], rate=56097.56/min [240000], rate=56692.91/min [250000], rate=57471.26/min [260000], rate=58208.96/min [270000], rate=59124.09/min [280000], rate=60215.05/min [290000], rate=59589.04/min [300000], rate=59016.39/min [310000], rate=58675.08/min [320000], rate=58181.82/min [330000], rate=57725.95/min [340000], rate=57464.79/min [350000], rate=57377.05/min [360000], rate=57294.43/min [370000], rate=57069.41/min [380000], rate=57000.00/min [390000], rate=57073.17/min [400000], rate=57831.33/min [410000], rate=58293.84/min [420000], rate=58878.50/min [430000], rate=59447.00/min [440000], rate=59459.46/min [450000], rate=59080.96/min [460000], rate=58350.95/min [470000], rate=57905.54/min [480000], rate=57600.00/min [490000], rate=57534.25/min [500000], rate=57581.57/min [510000], rate=57627.12/min [520000], rate=57564.58/min [530000], rate=57713.25/min [540000], rate=57754.01/min [550000], rate=57793.35/min [560000], rate=57831.33/min [570000], rate=58262.35/min [580000], rate=58684.65/min [590000], rate=59000.00/min [600000], rate=59113.30/min [610000], rate=59512.20/min [620000], rate=59807.07/min [630000], rate=60287.08/min [640000], rate=60759.49/min [650000], rate=61128.53/min [660000], rate=60923.08/min [670000], rate=60725.08/min [680000], rate=60534.12/min [690000], rate=60349.85/min [700000], rate=60431.65/min [710000], rate=60425.53/min [720000], rate=60589.06/min [730000], rate=60748.96/min [740000], rate=60905.35/min [750000], rate=61224.49/min [760000], rate=61538.46/min [770000], rate=61930.29/min [780000], rate=62234.04/min [790000], rate=62204.72/min [800000], rate=62015.50/min [810000], rate=61910.83/min [820000], rate=61731.49/min [830000], rate=61710.04/min [840000], rate=61689.11/min [850000], rate=61818.18/min [860000], rate=61944.78/min [870000], rate=62068.97/min [880000], rate=62190.81/min [890000], rate=62383.18/min [900000], rate=63010.50/min [910000], rate=63267.67/min [920000], rate=63375.43/min [930000], rate=63481.23/min [940000], rate=63370.79/min [950000], rate=63333.33/min [960000], rate=63366.34/min [970000], rate=63398.69/min [980000], rate=63498.92/min [990000], rate=63597.43/min [1000000], rate=63761.96/min [1010000], rate=63991.55/min [1020000], rate=64285.71/min [1030000], rate=64576.80/min [1040000], rate=64864.86/min -building interval tree based on /tmp/nxf.DFis1kKwbz/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.08 min). -mapping reads to genes [10000], rate=120000.00/min [20000], rate=150000.00/min [30000], rate=138461.54/min [40000], rate=133333.33/min [50000], rate=157894.74/min [60000], rate=189473.68/min [70000], rate=210000.00/min [80000], rate=184615.38/min [90000], rate=174193.55/min [100000], rate=162162.16/min [110000], rate=153488.37/min [120000], rate=160000.00/min [130000], rate=169565.22/min [140000], rate=182608.70/min [150000], rate=183673.47/min [160000], rate=181132.08/min [170000], rate=182142.86/min [180000], rate=177049.18/min [190000], rate=178125.00/min [200000], rate=184615.38/min [210000], rate=185294.12/min [220000], rate=180821.92/min [230000], rate=181578.95/min [240000], rate=180000.00/min [250000], rate=180722.89/min [260000], rate=185714.29/min [270000], rate=158823.53/min [280000], rate=135483.87/min [290000], rate=120000.00/min [300000], rate=108433.73/min [310000], rate=98936.17/min [320000], rate=91866.03/min [330000], rate=86086.96/min [340000], rate=81600.00/min [350000], rate=78358.21/min [360000], rate=75261.32/min [370000], rate=72549.02/min [380000], rate=70807.45/min [390000], rate=69436.20/min [400000], rate=68376.07/min [410000], rate=67397.26/min [420000], rate=66490.77/min [430000], rate=65151.52/min [440000], rate=64233.58/min [450000], rate=63679.25/min [460000], rate=63448.28/min [470000], rate=62806.24/min [480000], rate=62472.89/min [490000], rate=62288.14/min [500000], rate=62111.80/min [510000], rate=62195.12/min [520000], rate=62275.45/min [530000], rate=62475.44/min [540000], rate=62790.70/min [550000], rate=63097.51/min [560000], rate=63516.07/min [570000], rate=63216.27/min [580000], rate=62929.48/min [590000], rate=62765.96/min [600000], rate=62827.23/min [610000], rate=62778.73/min [620000], rate=62731.87/min [630000], rate=62790.70/min [640000], rate=62847.79/min [650000], rate=63004.85/min [660000], rate=63258.79/min [670000], rate=63507.11/min [680000], rate=63849.77/min [690000], rate=64285.71/min [700000], rate=63636.36/min [710000], rate=63111.11/min [720000], rate=62518.09/min [730000], rate=62127.66/min [740000], rate=61752.43/min [750000], rate=61475.41/min [760000], rate=61208.05/min [770000], rate=61111.11/min [780000], rate=60937.50/min [790000], rate=60691.42/min [800000], rate=60682.68/min [810000], rate=60750.00/min [820000], rate=60740.74/min [830000], rate=60731.71/min [840000], rate=61016.95/min [850000], rate=61224.49/min [860000], rate=61428.57/min [870000], rate=61629.28/min [880000], rate=61466.82/min [890000], rate=60750.85/min [900000], rate=60335.20/min [910000], rate=60132.16/min [920000], rate=60000.00/min [930000], rate=59807.07/min [940000], rate=59619.45/min [950000], rate=59561.13/min [960000], rate=59565.67/min [970000], rate=59692.31/min [980000], rate=59877.80/min [990000], rate=60060.67/min [1000000], rate=60301.51/min [1010000], rate=60600.00/min [1020000], rate=60895.52/min [1030000], rate=61127.60/min [1040000], rate=61356.93/min -building interval tree based on /tmp/nxf.DFis1kKwbz/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.10 min). -mapping reads to genes [10000], rate=60000.00/min [20000], rate=63157.89/min [30000], rate=66666.67/min [40000], rate=68571.43/min [50000], rate=69767.44/min [60000], rate=65454.55/min [70000], rate=64615.38/min [80000], rate=65753.42/min [90000], rate=65060.24/min [100000], rate=63829.79/min [110000], rate=62857.14/min [120000], rate=62068.97/min [130000], rate=61417.32/min [140000], rate=60869.57/min [150000], rate=60810.81/min [160000], rate=61146.50/min [170000], rate=61818.18/min [180000], rate=62790.70/min [190000], rate=63687.15/min [200000], rate=64864.86/min [210000], rate=64615.38/min [220000], rate=64077.67/min [230000], rate=63302.75/min [240000], rate=63157.89/min [250000], rate=63025.21/min [260000], rate=63414.63/min [270000], rate=63779.53/min [280000], rate=64615.38/min [290000], rate=66159.70/min [300000], rate=66666.67/min [310000], rate=67636.36/min [320000], rate=66435.99/min [330000], rate=65346.53/min [340000], rate=65594.86/min [350000], rate=64814.81/min [360000], rate=64094.96/min [370000], rate=63793.10/min [380000], rate=63509.75/min [390000], rate=63072.78/min [400000], rate=62337.66/min [410000], rate=61964.74/min [420000], rate=61764.71/min [430000], rate=61575.18/min [440000], rate=61538.46/min [450000], rate=61643.84/min [460000], rate=61469.93/min [470000], rate=61572.05/min [480000], rate=61538.46/min [490000], rate=61506.28/min [500000], rate=61601.64/min [510000], rate=61445.78/min [520000], rate=61538.46/min [530000], rate=61389.96/min [540000], rate=61480.08/min [550000], rate=61452.51/min [560000], rate=61764.71/min [570000], rate=62181.82/min [580000], rate=62589.93/min [590000], rate=62989.32/min [600000], rate=62176.17/min [610000], rate=61409.40/min [620000], rate=60883.80/min [630000], rate=60480.00/min [640000], rate=60188.09/min [650000], rate=59815.95/min [660000], rate=59548.87/min [670000], rate=59379.62/min [680000], rate=59130.43/min [690000], rate=59142.86/min [700000], rate=59154.93/min [710000], rate=59166.67/min [720000], rate=59178.08/min [730000], rate=59269.28/min [740000], rate=59517.43/min [750000], rate=59760.96/min [760000], rate=60079.05/min [770000], rate=60313.32/min [780000], rate=60621.76/min [790000], rate=60847.24/min [800000], rate=61381.07/min [810000], rate=61675.13/min [820000], rate=61886.79/min [830000], rate=62172.28/min [840000], rate=62299.13/min [850000], rate=61893.20/min [860000], rate=61501.79/min [870000], rate=61052.63/min [880000], rate=60759.49/min [890000], rate=60475.65/min [900000], rate=60402.68/min [910000], rate=60198.46/min [920000], rate=60000.00/min [930000], rate=59807.07/min [940000], rate=59682.54/min [950000], rate=59623.43/min [960000], rate=59565.67/min [970000], rate=59631.15/min [980000], rate=59695.43/min [990000], rate=59758.55/min [1000000], rate=60060.06/min [1010000], rate=60238.57/min [1020000], rate=60474.31/min [1030000], rate=60766.96/min [1040000], rate=61056.75/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.DFis1kKwbz/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.DFis1kKwbz/ctat_genome_lib_build_dir --filt_file /tmp/nxf.DFis1kKwbz/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.DFis1kKwbz/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -parsing /tmp/nxf.DFis1kKwbz/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info. 6000000.00 reads per min processed... 12000000.00 reads per min processed... 9000000.00 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 5142857.14 reads per min processed... 4666666.67 reads per min processed... 4800000.00 reads per min processed... 4500000.00 reads per min processed... 4615384.62 reads per min processed... 4714285.71 reads per min processed... 4500000.00 reads per min processed... 4333333.33 reads per min processed... 4200000.00 reads per min processed... 4090909.09 reads per min processed... 4173913.04 reads per min processed... 4080000.00 reads per min processed... 4153846.15 reads per min processed... 4071428.57 reads per min processed... 4137931.03 reads per min processed... 4200000.00 reads per min processed... 4258064.52 reads per min processed... 4312500.00 reads per min processed... 4363636.36 reads per min processed... 4545454.55 reads per min processed... 4457142.86 reads per min processed... 4378378.38 reads per min processed... 4421052.63 reads per min processed... 4350000.00 reads per min processed... 4285714.29 reads per min processed... 4325581.40 reads per min processed... 4266666.67 reads per min processed... 4304347.83 reads per min processed... 4340425.53 reads per min processed... 4285714.29 reads per min processed... 4320000.00 reads per min processed... done. * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.DFis1kKwbz/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.DFis1kKwbz/./star-fusion.preliminary/star-fusion -parsing fusion evidence: /tmp/nxf.DFis1kKwbz/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -outputting fusion candidates to file: /tmp/nxf.DFis1kKwbz/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.DFis1kKwbz/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.DFis1kKwbz/659_dm4-T1-TRNA-1_B23WHTKLT4_1.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.DFis1kKwbz/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.DFis1kKwbz/./star-fusion.preliminary/star-fusion CMD: mkdir -p /tmp/nxf.DFis1kKwbz/./star-fusion.preliminary/star-fusion.filter.intermediates_dir EM: Starting log likelihood: -61814.639603 EM: Round [1] log likelihood: -61788.818596 EM: Round [2] log likelihood: -61778.583109 EM: Round [3] log likelihood: -61773.325733 EM: Round [4] log likelihood: -61770.371331 EM: Round [5] log likelihood: -61768.638187 EM: Round [6] log likelihood: -61767.595460 EM: Round [7] log likelihood: -61766.954525 EM: Round [8] log likelihood: -61766.550985 EM: Round [9] log likelihood: -61766.289714 EM: Round [10] log likelihood: -61766.115256 EM: Round [11] log likelihood: -61765.994947 EM: Round [12] log likelihood: -61765.909245 EM: Round [13] log likelihood: -61765.846220 EM: Round [14] log likelihood: -61765.798425 EM: Round [15] log likelihood: -61765.761100 EM: Round [16] log likelihood: -61765.731133 EM: Round [17] log likelihood: -61765.706446 EM: Round [18] log likelihood: -61765.685627 EM: Round [19] log likelihood: -61765.667696 EM: Round [20] log likelihood: -61765.651967 EM: Round [21] log likelihood: -61765.637947 EM: Round [22] log likelihood: -61765.625284 EM: Round [23] log likelihood: -61765.613718 EM: Round [24] log likelihood: -61765.603056 EM: Round [25] log likelihood: -61765.593155 EM: Round [26] log likelihood: -61765.583903 EM: Round [27] log likelihood: -61765.575217 EM: Round [28] log likelihood: -61765.567030 EM: Round [29] log likelihood: -61765.559288 EM: Round [30] log likelihood: -61765.551950 EM: Round [31] log likelihood: -61765.544978 EM: Round [32] log likelihood: -61765.538345 EM: Round [33] log likelihood: -61765.532025 EM: Round [34] log likelihood: -61765.525996 EM: Round [35] log likelihood: -61765.520239 EM: Round [36] log likelihood: -61765.514739 EM: Round [37] log likelihood: -61765.509480 EM: Round [38] log likelihood: -61765.504449 EM: Round [39] log likelihood: -61765.499633 EM: Round [40] log likelihood: -61765.495021 EM: Round [41] log likelihood: -61765.490604 EM: Round [42] log likelihood: -61765.486371 EM: Round [43] log likelihood: -61765.482314 EM: Round [44] log likelihood: -61765.478425 EM: Round [45] log likelihood: -61765.474695 EM: Round [46] log likelihood: -61765.471117 EM: Round [47] log likelihood: -61765.467684 EM: Round [48] log likelihood: -61765.464391 EM: Round [49] log likelihood: -61765.461230 EM: Round [50] log likelihood: -61765.458196 EM: Round [51] log likelihood: -61765.455284 EM: Round [52] log likelihood: -61765.452487 EM: Round [53] log likelihood: -61765.449802 EM: Round [54] log likelihood: -61765.447224 EM: Round [55] log likelihood: -61765.444747 EM: Round [56] log likelihood: -61765.442368 EM: Round [57] log likelihood: -61765.440082 EM: Round [58] log likelihood: -61765.437886 EM: Round [59] log likelihood: -61765.435776 EM: Round [60] log likelihood: -61765.433748 EM: Round [61] log likelihood: -61765.431800 EM: Round [62] log likelihood: -61765.429927 EM: Round [63] log likelihood: -61765.428127 EM: Round [64] log likelihood: -61765.426397 EM: Round [65] log likelihood: -61765.424733 EM: Round [66] log likelihood: -61765.423134 EM: Round [67] log likelihood: -61765.421597 EM: Round [68] log likelihood: -61765.420118 EM: Round [69] log likelihood: -61765.418697 EM: Round [70] log likelihood: -61765.417330 EM: Round [71] log likelihood: -61765.416015 EM: Round [72] log likelihood: -61765.414751 EM: Round [73] log likelihood: -61765.413535 EM: Round [74] log likelihood: -61765.412366 EM: Round [75] log likelihood: -61765.411241 EM: Round [76] log likelihood: -61765.410159 EM: Round [77] log likelihood: -61765.409118 EM: Round [78] log likelihood: -61765.408117 EM: Round [79] log likelihood: -61765.407154 EM: Round [80] log likelihood: -61765.406227 EM: Round [81] log likelihood: -61765.405336 EM: Round [82] log likelihood: -61765.404478 EM: Round [83] log likelihood: -61765.403653 EM: Round [84] log likelihood: -61765.402858 EM: Round [85] log likelihood: -61765.402094 EM: Round [86] log likelihood: -61765.401359 EM: Round [87] log likelihood: -61765.400652 EM: Round [88] log likelihood: -61765.399971 EM: Round [89] log likelihood: -61765.399316 EM: Round [90] log likelihood: -61765.398685 EM: Round [91] log likelihood: -61765.398079 EM: Round [92] log likelihood: -61765.397495 EM: Round [93] log likelihood: -61765.396933 EM: Round [94] log likelihood: -61765.396392 EM: Round [95] log likelihood: -61765.395871 EM: Round [96] log likelihood: -61765.395370 EM: Round [97] log likelihood: -61765.394888 EM: Round [98] log likelihood: -61765.394424 EM: Round [99] log likelihood: -61765.393977 EM: Round [100] log likelihood: -61765.393547 EM: Round [101] log likelihood: -61765.393133 EM: Round [102] log likelihood: -61765.392735 EM: Round [103] log likelihood: -61765.392351 EM: Round [104] log likelihood: -61765.391982 EM: Round [105] log likelihood: -61765.391627 EM: Round [106] log likelihood: -61765.391285 EM: Round [107] log likelihood: -61765.390955 EM: Round [108] log likelihood: -61765.390638 EM: Round [109] log likelihood: -61765.390333 EM: Round [110] log likelihood: -61765.390039 EM: Round [111] log likelihood: -61765.389756 EM: Round [112] log likelihood: -61765.389484 EM: Round [113] log likelihood: -61765.389222 EM: Round [114] log likelihood: -61765.388970 EM: Round [115] log likelihood: -61765.388727 EM: Round [116] log likelihood: -61765.388493 EM: Round [117] log likelihood: -61765.388268 EM: Round [118] log likelihood: -61765.388051 EM: Round [119] log likelihood: -61765.387842 EM: Round [120] log likelihood: -61765.387641 EM: Round [121] log likelihood: -61765.387448 EM: Round [122] log likelihood: -61765.387262 EM: Round [123] log likelihood: -61765.387082 EM: Round [124] log likelihood: -61765.386910 EM: Round [125] log likelihood: -61765.386743 EM: Round [126] log likelihood: -61765.386583 EM: Round [127] log likelihood: -61765.386429 EM: Round [128] log likelihood: -61765.386281 EM: Round [129] log likelihood: -61765.386138 EM: Round [130] log likelihood: -61765.386000 EM: Round [131] log likelihood: -61765.385868 EM: Round [132] log likelihood: -61765.385741 EM: Round [133] log likelihood: -61765.385618 EM: Round [134] log likelihood: -61765.385500 EM: Round [135] log likelihood: -61765.385386 EM: Round [136] log likelihood: -61765.385276 EM: Round [137] log likelihood: -61765.385171 EM: Round [138] log likelihood: -61765.385069 EM: Round [139] log likelihood: -61765.384971 EM: Stopping iterations at round 139 due to insufficient improvement in likelihood. EM: Starting log likelihood: -61791.989118 EM: Round [1] log likelihood: -61767.278932 EM: Round [2] log likelihood: -61757.749841 EM: Round [3] log likelihood: -61752.912570 EM: Round [4] log likelihood: -61750.204722 EM: Round [5] log likelihood: -61748.618820 EM: Round [6] log likelihood: -61747.666651 EM: Round [7] log likelihood: -61747.083111 EM: Round [8] log likelihood: -61746.716909 EM: Round [9] log likelihood: -61746.480450 EM: Round [10] log likelihood: -61746.322763 EM: Round [11] log likelihood: -61746.213948 EM: Round [12] log likelihood: -61746.136214 EM: Round [13] log likelihood: -61746.078767 EM: Round [14] log likelihood: -61746.034907 EM: Round [15] log likelihood: -61746.000379 EM: Round [16] log likelihood: -61745.972412 EM: Round [17] log likelihood: -61745.949165 EM: Round [18] log likelihood: -61745.929386 EM: Round [19] log likelihood: -61745.912211 EM: Round [20] log likelihood: -61745.897032 EM: Round [21] log likelihood: -61745.883417 EM: Round [22] log likelihood: -61745.871051 EM: Round [23] log likelihood: -61745.859703 EM: Round [24] log likelihood: -61745.849204 EM: Round [25] log likelihood: -61745.839423 EM: Round [26] log likelihood: -61745.830261 EM: Round [27] log likelihood: -61745.821642 EM: Round [28] log likelihood: -61745.813505 EM: Round [29] log likelihood: -61745.805801 EM: Round [30] log likelihood: -61745.798491 EM: Round [31] log likelihood: -61745.791541 EM: Round [32] log likelihood: -61745.784923 EM: Round [33] log likelihood: -61745.778615 EM: Round [34] log likelihood: -61745.772596 EM: Round [35] log likelihood: -61745.766847 EM: Round [36] log likelihood: -61745.761352 EM: Round [37] log likelihood: -61745.756097 EM: Round [38] log likelihood: -61745.751069 EM: Round [39] log likelihood: -61745.746255 EM: Round [40] log likelihood: -61745.741646 EM: Round [41] log likelihood: -61745.737230 EM: Round [42] log likelihood: -61745.732999 EM: Round [43] log likelihood: -61745.728943 EM: Round [44] log likelihood: -61745.725054 EM: Round [45] log likelihood: -61745.721324 EM: Round [46] log likelihood: -61745.717747 EM: Round [47] log likelihood: -61745.714315 EM: Round [48] log likelihood: -61745.711022 EM: Round [49] log likelihood: -61745.707861 EM: Round [50] log likelihood: -61745.704827 EM: Round [51] log likelihood: -61745.701915 EM: Round [52] log likelihood: -61745.699119 EM: Round [53] log likelihood: -61745.696434 EM: Round [54] log likelihood: -61745.693855 EM: Round [55] log likelihood: -61745.691378 EM: Round [56] log likelihood: -61745.688999 EM: Round [57] log likelihood: -61745.686713 EM: Round [58] log likelihood: -61745.684518 EM: Round [59] log likelihood: -61745.682408 EM: Round [60] log likelihood: -61745.680380 EM: Round [61] log likelihood: -61745.678431 EM: Round [62] log likelihood: -61745.676559 EM: Round [63] log likelihood: -61745.674759 EM: Round [64] log likelihood: -61745.673028 EM: Round [65] log likelihood: -61745.671365 EM: Round [66] log likelihood: -61745.669766 EM: Round [67] log likelihood: -61745.668228 EM: Round [68] log likelihood: -61745.666750 EM: Round [69] log likelihood: -61745.665328 EM: Round [70] log likelihood: -61745.663961 EM: Round [71] log likelihood: -61745.662647 EM: Round [72] log likelihood: -61745.661383 EM: Round [73] log likelihood: -61745.660167 EM: Round [74] log likelihood: -61745.658997 EM: Round [75] log likelihood: -61745.657873 EM: Round [76] log likelihood: -61745.656791 EM: Round [77] log likelihood: -61745.655750 EM: Round [78] log likelihood: -61745.654749 EM: Round [79] log likelihood: -61745.653785 EM: Round [80] log likelihood: -61745.652859 EM: Round [81] log likelihood: -61745.651967 EM: Round [82] log likelihood: -61745.651109 EM: Round [83] log likelihood: -61745.650284 EM: Round [84] log likelihood: -61745.649490 EM: Round [85] log likelihood: -61745.648726 EM: Round [86] log likelihood: -61745.647991 EM: Round [87] log likelihood: -61745.647283 EM: Round [88] log likelihood: -61745.646603 EM: Round [89] log likelihood: -61745.645947 EM: Round [90] log likelihood: -61745.645317 EM: Round [91] log likelihood: -61745.644710 EM: Round [92] log likelihood: -61745.644126 EM: Round [93] log likelihood: -61745.643564 EM: Round [94] log likelihood: -61745.643023 EM: Round [95] log likelihood: -61745.642503 EM: Round [96] log likelihood: -61745.642002 EM: Round [97] log likelihood: -61745.641520 EM: Round [98] log likelihood: -61745.641056 EM: Round [99] log likelihood: -61745.640609 EM: Round [100] log likelihood: -61745.640179 EM: Round [101] log likelihood: -61745.639765 EM: Round [102] log likelihood: -61745.639366 EM: Round [103] log likelihood: -61745.638983 EM: Round [104] log likelihood: -61745.638614 EM: Round [105] log likelihood: -61745.638258 EM: Round [106] log likelihood: -61745.637916 EM: Round [107] log likelihood: -61745.637587 EM: Round [108] log likelihood: -61745.637270 EM: Round [109] log likelihood: -61745.636965 EM: Round [110] log likelihood: -61745.636671 EM: Round [111] log likelihood: -61745.636388 EM: Round [112] log likelihood: -61745.636116 EM: Round [113] log likelihood: -61745.635854 EM: Round [114] log likelihood: -61745.635601 EM: Round [115] log likelihood: -61745.635358 EM: Round [116] log likelihood: -61745.635125 EM: Round [117] log likelihood: -61745.634899 EM: Round [118] log likelihood: -61745.634683 EM: Round [119] log likelihood: -61745.634474 EM: Round [120] log likelihood: -61745.634273 EM: Round [121] log likelihood: -61745.634080 EM: Round [122] log likelihood: -61745.633893 EM: Round [123] log likelihood: -61745.633714 EM: Round [124] log likelihood: -61745.633541 EM: Round [125] log likelihood: -61745.633375 EM: Round [126] log likelihood: -61745.633215 EM: Round [127] log likelihood: -61745.633061 EM: Round [128] log likelihood: -61745.632913 EM: Round [129] log likelihood: -61745.632770 EM: Round [130] log likelihood: -61745.632632 EM: Round [131] log likelihood: -61745.632500 EM: Round [132] log likelihood: -61745.632372 EM: Round [133] log likelihood: -61745.632249 EM: Round [134] log likelihood: -61745.632131 EM: Round [135] log likelihood: -61745.632017 EM: Round [136] log likelihood: -61745.631908 EM: Round [137] log likelihood: -61745.631802 EM: Round [138] log likelihood: -61745.631701 EM: Round [139] log likelihood: -61745.631603 EM: Stopping iterations at round 139 due to insufficient improvement in likelihood. CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.DFis1kKwbz/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.DFis1kKwbz/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.DFis1kKwbz/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.DFis1kKwbz/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.DFis1kKwbz/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.DFis1kKwbz/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.DFis1kKwbz/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20 CMD: cp /tmp/nxf.DFis1kKwbz/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.DFis1kKwbz/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.DFis1kKwbz/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.DFis1kKwbz/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged CMD: ln -sf /tmp/nxf.DFis1kKwbz/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.DFis1kKwbz/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered * Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.DFis1kKwbz/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 102160001 > /tmp/nxf.DFis1kKwbz/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM * Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.DFis1kKwbz/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.DFis1kKwbz/ctat_genome_lib_build_dir > /tmp/nxf.DFis1kKwbz/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.DFis1kKwbz/ctat_genome_lib_build_dir --annotate /tmp/nxf.DFis1kKwbz/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.DFis1kKwbz/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot * Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.DFis1kKwbz/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.DFis1kKwbz/ctat_genome_lib_build_dir -done, see /tmp/nxf.DFis1kKwbz/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass * Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.DFis1kKwbz/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.DFis1kKwbz/ctat_genome_lib_build_dir -filter_likely_RT_artifacts: (pass: 756, filtered: 5626) * Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.DFis1kKwbz/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001 * Running CMD: cp /tmp/nxf.DFis1kKwbz/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv * Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.DFis1kKwbz/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv WARNING, no entry stored in dbm for [ENSG00000239268.3] WARNING, no entry stored in dbm for [ENSG00000237296.9] WARNING, no entry stored in dbm for [ENSG00000229739.4] WARNING, no entry stored in dbm for [ENSG00000287721.1] WARNING, no entry stored in dbm for [ENSG00000281344.1] WARNING, no entry stored in dbm for [ENSG00000230202.1] WARNING, no entry stored in dbm for [ENSG00000234911.2] WARNING, no entry stored in dbm for [ENSG00000219814.2] WARNING, no entry stored in dbm for [ENSG00000227681.5] WARNING, no entry stored in dbm for [ENSG00000179362.14] WARNING, no entry stored in dbm for [ENSG00000214433.4] WARNING, no entry stored in dbm for [ENSG00000227014.6] WARNING, no entry stored in dbm for [ENSG00000231528.3] WARNING, no entry stored in dbm for [ENSG00000248994.2] WARNING, no entry stored in dbm for [ENSG00000271162.1] WARNING, no entry stored in dbm for [ENSG00000253882.6] WARNING, no entry stored in dbm for [ENSG00000227619.3] WARNING, no entry stored in dbm for [ENSG00000230305.2] WARNING, no entry stored in dbm for [ENSG00000239556.4] WARNING, no entry stored in dbm for [ENSG00000214243.3] WARNING, no entry stored in dbm for [ENSG00000205485.13] WARNING, no entry stored in dbm for [ENSG00000229956.11] WARNING, no entry stored in dbm for [ENSG00000228303.1] WARNING, no entry stored in dbm for [ENSG00000276375.1] WARNING, no entry stored in dbm for [ENSG00000230565.1] WARNING, no entry stored in dbm for [ENSG00000197083.11] WARNING, no entry stored in dbm for [ENSG00000285331.2] WARNING, no entry stored in dbm for [ENSG00000233509.2] WARNING, no entry stored in dbm for [ENSG00000267586.7] WARNING, no entry stored in dbm for [ENSG00000269293.3] WARNING, no entry stored in dbm for [ENSG00000282458.1] WARNING, no entry stored in dbm for [ENSG00000146556.14] WARNING, no entry stored in dbm for [ENSG00000285219.2] WARNING, no entry stored in dbm for [ENSG00000270549.1] WARNING, no entry stored in dbm for [ENSG00000176728.10] WARNING, no entry stored in dbm for [ENSG00000235954.7] WARNING, no entry stored in dbm for [ENSG00000239899.3] WARNING, no entry stored in dbm for [ENSG00000235954.7] WARNING, no entry stored in dbm for [ENSG00000244642.3] WARNING, no entry stored in dbm for [ENSG00000248858.7] WARNING, no entry stored in dbm for [ENSG00000235756.2] WARNING, no entry stored in dbm for [ENSG00000214106.9] WARNING, no entry stored in dbm for [ENSG00000215333.3] WARNING, no entry stored in dbm for [ENSG00000281896.1] WARNING, no entry stored in dbm for [ENSG00000269235.2] WARNING, no entry stored in dbm for [ENSG00000276101.1] WARNING, no entry stored in dbm for [ENSG00000277072.5] WARNING, no entry stored in dbm for [ENSG00000215244.3] WARNING, no entry stored in dbm for [ENSG00000254027.1] WARNING, no entry stored in dbm for [ENSG00000224899.1] WARNING, no entry stored in dbm for [ENSG00000158482.10] WARNING, no entry stored in dbm for [ENSG00000224479.6] WARNING, no entry stored in dbm for [ENSG00000287920.1] WARNING, no entry stored in dbm for [ENSG00000256199.1] WARNING, no entry stored in dbm for [ENSG00000215790.8] WARNING, no entry stored in dbm for [ENSG00000215790.8] WARNING, no entry stored in dbm for [ENSG00000249494.6] WARNING, no entry stored in dbm for [ENSG00000262801.6] WARNING, no entry stored in dbm for [ENSG00000287411.1] WARNING, no entry stored in dbm for [ENSG00000281131.1] WARNING, no entry stored in dbm for [ENSG00000281131.1] WARNING, no entry stored in dbm for [ENSG00000224582.7] WARNING, no entry stored in dbm for [ENSG00000231449.1] WARNING, no entry stored in dbm for [ENSG00000184139.8] WARNING, no entry stored in dbm for [ENSG00000215869.4] WARNING, no entry stored in dbm for [ENSG00000215444.2] WARNING, no entry stored in dbm for [ENSG00000215002.2] WARNING, no entry stored in dbm for [ENSG00000230841.2] WARNING, no entry stored in dbm for [ENSG00000223508.5] WARNING, no entry stored in dbm for [ENSG00000230559.1] WARNING, no entry stored in dbm for [ENSG00000222386.1] WARNING, no entry stored in dbm for [ENSG00000200131.1] WARNING, no entry stored in dbm for [ENSG00000201428.1] WARNING, no entry stored in dbm for [ENSG00000201010.1] WARNING, no entry stored in dbm for [ENSG00000227371.1] WARNING, no entry stored in dbm for [ENSG00000241291.3] WARNING, no entry stored in dbm for [ENSG00000239437.3] WARNING, no entry stored in dbm for [ENSG00000241291.3] WARNING, no entry stored in dbm for [ENSG00000278771.1] WARNING, no entry stored in dbm for [ENSG00000240772.3] WARNING, no entry stored in dbm for [ENSG00000239437.3] WARNING, no entry stored in dbm for [ENSG00000240772.3] WARNING, no entry stored in dbm for [ENSG00000278771.1] WARNING, no entry stored in dbm for [ENSG00000241229.3] WARNING, no entry stored in dbm for [ENSG00000239437.3] WARNING, no entry stored in dbm for [ENSG00000241229.3] WARNING, no entry stored in dbm for [ENSG00000278771.1] WARNING, no entry stored in dbm for [ENSG00000249201.2] WARNING, no entry stored in dbm for [ENSG00000214176.9] WARNING, no entry stored in dbm for [ENSG00000258888.1] WARNING, no entry stored in dbm for [ENSG00000223575.2] WARNING, no entry stored in dbm for [ENSG00000248215.6] WARNING, no entry stored in dbm for [ENSG00000204055.5] WARNING, no entry stored in dbm for [ENSG00000281128.2] WARNING, no entry stored in dbm for [ENSG00000231165.3] WARNING, no entry stored in dbm for [ENSG00000237984.3] WARNING, no entry stored in dbm for [ENSG00000234690.7] WARNING, no entry stored in dbm for [ENSG00000258584.2] WARNING, no entry stored in dbm for [ENSG00000229105.1] WARNING, no entry stored in dbm for [ENSG00000226985.7] WARNING, no entry stored in dbm for [ENSG00000272767.1] WARNING, no entry stored in dbm for [ENSG00000285993.1] WARNING, no entry stored in dbm for [ENSG00000287998.1] WARNING, no entry stored in dbm for [ENSG00000233184.7] WARNING, no entry stored in dbm for [ENSG00000232117.2] WARNING, no entry stored in dbm for [ENSG00000273125.2] WARNING, no entry stored in dbm for [ENSG00000282012.1] WARNING, no entry stored in dbm for [ENSG00000265369.3] WARNING, no entry stored in dbm for [ENSG00000225638.1] WARNING, no entry stored in dbm for [ENSG00000230673.3] WARNING, no entry stored in dbm for [ENSG00000230364.1] WARNING, no entry stored in dbm for [ENSG00000230834.1] WARNING, no entry stored in dbm for [ENSG00000251485.1] WARNING, no entry stored in dbm for [ENSG00000214807.2] WARNING, no entry stored in dbm for [ENSG00000226703.1] WARNING, no entry stored in dbm for [ENSG00000269904.2] WARNING, no entry stored in dbm for [ENSG00000235703.6] WARNING, no entry stored in dbm for [ENSG00000235703.6] WARNING, no entry stored in dbm for [ENSG00000235703.6] WARNING, no entry stored in dbm for [ENSG00000235703.6] WARNING, no entry stored in dbm for [ENSG00000223881.1] WARNING, no entry stored in dbm for [ENSG00000227632.2] WARNING, no entry stored in dbm for [ENSG00000224078.15] WARNING, no entry stored in dbm for [ENSG00000250731.1] WARNING, no entry stored in dbm for [ENSG00000229091.3] WARNING, no entry stored in dbm for [ENSG00000235142.10] WARNING, no entry stored in dbm for [ENSG00000270960.1] WARNING, no entry stored in dbm for [ENSG00000203392.3] WARNING, no entry stored in dbm for [ENSG00000232527.8] WARNING, no entry stored in dbm for [ENSG00000272779.1] WARNING, no entry stored in dbm for [ENSG00000255008.3] WARNING, no entry stored in dbm for [ENSG00000259448.3] WARNING, no entry stored in dbm for [ENSG00000260433.3] WARNING, no entry stored in dbm for [ENSG00000234928.1] WARNING, no entry stored in dbm for [ENSG00000227755.1] WARNING, no entry stored in dbm for [ENSG00000226917.6] WARNING, no entry stored in dbm for [ENSG00000227036.8] WARNING, no entry stored in dbm for [ENSG00000237854.3] WARNING, no entry stored in dbm for [ENSG00000230710.2] WARNING, no entry stored in dbm for [ENSG00000216817.1] WARNING, no entry stored in dbm for [ENSG00000215838.4] WARNING, no entry stored in dbm for [ENSG00000264177.1] WARNING, no entry stored in dbm for [ENSG00000203709.12] WARNING, no entry stored in dbm for [ENSG00000229976.2] WARNING, no entry stored in dbm for [ENSG00000264823.3] WARNING, no entry stored in dbm for [ENSG00000254034.2] WARNING, no entry stored in dbm for [ENSG00000244652.1] WARNING, no entry stored in dbm for [ENSG00000242337.5] WARNING, no entry stored in dbm for [ENSG00000261275.1] WARNING, no entry stored in dbm for [ENSG00000229979.1] WARNING, no entry stored in dbm for [ENSG00000227259.2] WARNING, no entry stored in dbm for [ENSG00000237380.7] WARNING, no entry stored in dbm for [ENSG00000266602.2] WARNING, no entry stored in dbm for [ENSG00000228223.3] WARNING, no entry stored in dbm for [ENSG00000198237.8] WARNING, no entry stored in dbm for [ENSG00000251451.1] WARNING, no entry stored in dbm for [ENSG00000229180.7] WARNING, no entry stored in dbm for [ENSG00000241838.3] WARNING, no entry stored in dbm for [ENSG00000281103.2] WARNING, no entry stored in dbm for [ENSG00000285763.1] WARNING, no entry stored in dbm for [ENSG00000245954.8] WARNING, no entry stored in dbm for [ENSG00000258535.1] WARNING, no entry stored in dbm for [ENSG00000280441.3] WARNING, no entry stored in dbm for [ENSG00000203801.8] WARNING, no entry stored in dbm for [ENSG00000215063.3] WARNING, no entry stored in dbm for [ENSG00000255052.5] WARNING, no entry stored in dbm for [ENSG00000254016.3] WARNING, no entry stored in dbm for [ENSG00000236438.7] WARNING, no entry stored in dbm for [ENSG00000277083.1] WARNING, no entry stored in dbm for [ENSG00000235338.1] WARNING, no entry stored in dbm for [ENSG00000235338.1] WARNING, no entry stored in dbm for [ENSG00000251584.2] WARNING, no entry stored in dbm for [ENSG00000284523.2] WARNING, no entry stored in dbm for [ENSG00000231672.8] WARNING, no entry stored in dbm for [ENSG00000187185.4] WARNING, no entry stored in dbm for [ENSG00000212282.1] WARNING, no entry stored in dbm for [ENSG00000264070.1] WARNING, no entry stored in dbm for [ENSG00000233871.2] WARNING, no entry stored in dbm for [ENSG00000225005.1] WARNING, no entry stored in dbm for [ENSG00000239944.1] WARNING, no entry stored in dbm for [ENSG00000204790.9] WARNING, no entry stored in dbm for [ENSG00000255438.2] WARNING, no entry stored in dbm for [ENSG00000234715.2] WARNING, no entry stored in dbm for [ENSG00000272888.7] WARNING, no entry stored in dbm for [ENSG00000163098.6] WARNING, no entry stored in dbm for [ENSG00000235501.6] WARNING, no entry stored in dbm for [ENSG00000228775.8] WARNING, no entry stored in dbm for [ENSG00000268601.1] WARNING, no entry stored in dbm for [ENSG00000167747.15] WARNING, no entry stored in dbm for [ENSG00000236105.1] WARNING, no entry stored in dbm for [ENSG00000258780.1] WARNING, no entry stored in dbm for [ENSG00000271138.1] WARNING, no entry stored in dbm for [ENSG00000158482.10] WARNING, no entry stored in dbm for [ENSG00000272692.2] WARNING, no entry stored in dbm for [ENSG00000273986.1] WARNING, no entry stored in dbm for [ENSG00000257252.6] WARNING, no entry stored in dbm for [ENSG00000238021.6] WARNING, no entry stored in dbm for [ENSG00000223602.2] WARNING, no entry stored in dbm for [ENSG00000204790.9] WARNING, no entry stored in dbm for [ENSG00000238045.9] WARNING, no entry stored in dbm for [ENSG00000239415.1] WARNING, no entry stored in dbm for [ENSG00000237187.9] WARNING, no entry stored in dbm for [ENSG00000261019.1] WARNING, no entry stored in dbm for [ENSG00000237037.9] WARNING, no entry stored in dbm for [ENSG00000224839.1] WARNING, no entry stored in dbm for [ENSG00000286974.1] WARNING, no entry stored in dbm for [ENSG00000279575.1] WARNING, no entry stored in dbm for [ENSG00000276888.1] WARNING, no entry stored in dbm for [ENSG00000228685.1] WARNING, no entry stored in dbm for [ENSG00000234851.4] WARNING, no entry stored in dbm for [ENSG00000237356.7] WARNING, no entry stored in dbm for [ENSG00000258731.1] WARNING, no entry stored in dbm for [ENSG00000235804.2] WARNING, no entry stored in dbm for [ENSG00000286439.1] WARNING, no entry stored in dbm for [ENSG00000286439.1] WARNING, no entry stored in dbm for [ENSG00000286439.1] WARNING, no entry stored in dbm for [ENSG00000228436.3] WARNING, no entry stored in dbm for [ENSG00000220685.3] WARNING, no entry stored in dbm for [ENSG00000278231.1] WARNING, no entry stored in dbm for [ENSG00000273619.1] WARNING, no entry stored in dbm for [ENSG00000287920.1] WARNING, no entry stored in dbm for [ENSG00000282740.1] WARNING, no entry stored in dbm for [ENSG00000230869.1] WARNING, no entry stored in dbm for [ENSG00000272140.2] WARNING, no entry stored in dbm for [ENSG00000258458.8] WARNING, no entry stored in dbm for [ENSG00000272734.1] WARNING, no entry stored in dbm for [ENSG00000281731.3] WARNING, no entry stored in dbm for [ENSG00000226755.2] WARNING, no entry stored in dbm for [ENSG00000224016.2] WARNING, no entry stored in dbm for [ENSG00000228223.3] WARNING, no entry stored in dbm for [ENSG00000242142.1] WARNING, no entry stored in dbm for [ENSG00000223804.5] WARNING, no entry stored in dbm for [ENSG00000230937.12] WARNING, no entry stored in dbm for [ENSG00000261499.2] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000232729.8] WARNING, no entry stored in dbm for [ENSG00000229930.1] WARNING, no entry stored in dbm for [ENSG00000266717.1] WARNING, no entry stored in dbm for [ENSG00000248752.3] WARNING, no entry stored in dbm for [ENSG00000188850.9] WARNING, no entry stored in dbm for [ENSG00000260037.5] WARNING, no entry stored in dbm for [ENSG00000247193.3] WARNING, no entry stored in dbm for [ENSG00000285788.1] WARNING, no entry stored in dbm for [ENSG00000271943.2] WARNING, no entry stored in dbm for [ENSG00000286596.1] WARNING, no entry stored in dbm for [ENSG00000287129.1] WARNING, no entry stored in dbm for [ENSG00000231646.6] WARNING, no entry stored in dbm for [ENSG00000282057.1] WARNING, no entry stored in dbm for [ENSG00000288620.1] WARNING, no entry stored in dbm for [ENSG00000288620.1] WARNING, no entry stored in dbm for [ENSG00000187953.10] WARNING, no entry stored in dbm for [ENSG00000257337.7] WARNING, no entry stored in dbm for [ENSG00000283674.3] WARNING, no entry stored in dbm for [ENSG00000283674.3] WARNING, no entry stored in dbm for [ENSG00000248618.1] WARNING, no entry stored in dbm for [ENSG00000254339.5] WARNING, no entry stored in dbm for [ENSG00000267648.1] WARNING, no entry stored in dbm for [ENSG00000267040.6] WARNING, no entry stored in dbm for [ENSG00000260693.1] WARNING, no entry stored in dbm for [ENSG00000287677.2] WARNING, no entry stored in dbm for [ENSG00000272140.2] WARNING, no entry stored in dbm for [ENSG00000242338.6] WARNING, no entry stored in dbm for [ENSG00000267075.1] WARNING, no entry stored in dbm for [ENSG00000269321.1] WARNING, no entry stored in dbm for [ENSG00000272622.2] WARNING, no entry stored in dbm for [ENSG00000250360.1] WARNING, no entry stored in dbm for [ENSG00000235583.2] WARNING, no entry stored in dbm for [ENSG00000255595.5] WARNING, no entry stored in dbm for [ENSG00000267623.3] WARNING, no entry stored in dbm for [ENSG00000205485.13] WARNING, no entry stored in dbm for [ENSG00000205485.13] WARNING, no entry stored in dbm for [ENSG00000254610.3] WARNING, no entry stored in dbm for [ENSG00000248498.4] WARNING, no entry stored in dbm for [ENSG00000231749.3] WARNING, no entry stored in dbm for [ENSG00000286063.1] * STAR-Fusion complete. See output: /tmp/nxf.DFis1kKwbz/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)