-ctat genome lib [/tmp/nxf.MQMkj64SAp/ctat_genome_lib_build_dir] validates. CMD: mkdir -p /tmp/nxf.MQMkj64SAp/./_starF_checkpoints CMD: mkdir -p /tmp/nxf.MQMkj64SAp/./star-fusion.preliminary -sample contains 150357717 rnaseq fragments * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.MQMkj64SAp/ctat_genome_lib_build_dir -J /tmp/nxf.MQMkj64SAp/659_Dl-T1-TRNA-1_B23WHTKLT4_1.Chimeric.out.junction -O /tmp/nxf.MQMkj64SAp/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 -parsing fusion evidence: /tmp/nxf.MQMkj64SAp/659_Dl-T1-TRNA-1_B23WHTKLT4_1.Chimeric.out.junction -building interval tree based on /tmp/nxf.MQMkj64SAp/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=60000.00/min [20000], rate=60000.00/min [30000], rate=62068.97/min [40000], rate=63157.89/min [50000], rate=63829.79/min [60000], rate=64285.71/min [70000], rate=64615.38/min [80000], rate=65753.42/min [90000], rate=67500.00/min [100000], rate=69767.44/min [110000], rate=71739.13/min [120000], rate=73469.39/min [130000], rate=75000.00/min [140000], rate=77064.22/min [150000], rate=79646.02/min [160000], rate=82051.28/min [170000], rate=84297.52/min [180000], rate=86400.00/min [190000], rate=85714.29/min [200000], rate=82191.78/min [210000], rate=78750.00/min [220000], rate=72928.18/min [230000], rate=66666.67/min [240000], rate=63716.81/min [250000], rate=62761.51/min [260000], rate=61904.76/min [270000], rate=61363.64/min [280000], rate=60869.57/min [290000], rate=60627.18/min [300000], rate=60606.06/min [310000], rate=60586.32/min [320000], rate=60188.09/min [330000], rate=59459.46/min [340000], rate=59302.33/min [350000], rate=59322.03/min [360000], rate=59504.13/min [370000], rate=59517.43/min [380000], rate=59220.78/min [390000], rate=59240.51/min [400000], rate=59113.30/min [410000], rate=59277.11/min [420000], rate=59294.12/min [430000], rate=59447.00/min [440000], rate=59593.68/min [450000], rate=59866.96/min [460000], rate=60130.72/min [470000], rate=60515.02/min [480000], rate=61016.95/min [490000], rate=61506.28/min [500000], rate=62111.80/min [510000], rate=62576.69/min [520000], rate=63157.89/min [530000], rate=63855.42/min [540000], rate=64413.52/min [550000], rate=64960.63/min [560000], rate=65242.72/min [570000], rate=65391.97/min [580000], rate=65784.50/min [590000], rate=66168.22/min [600000], rate=66543.44/min [610000], rate=66910.42/min [620000], rate=67391.30/min [630000], rate=67863.55/min [640000], rate=68327.40/min [650000], rate=68904.59/min [660000], rate=69352.01/min [670000], rate=70034.84/min [680000], rate=70710.57/min [690000], rate=71379.31/min [700000], rate=72041.17/min [710000], rate=72572.40/min [720000], rate=72972.97/min [730000], rate=73613.45/min [740000], rate=74123.54/min [750000], rate=74380.17/min [760000], rate=74876.85/min [770000], rate=75367.05/min [780000], rate=76097.56/min [790000], rate=76575.12/min [800000], rate=77294.69/min [810000], rate=77760.00/min [820000], rate=78343.95/min [830000], rate=78672.99/min [840000], rate=79245.28/min [850000], rate=80188.68/min [860000], rate=81004.71/min [870000], rate=81435.26/min [880000], rate=81607.42/min [890000], rate=81651.38/min [900000], rate=82191.78/min [910000], rate=82352.94/min [920000], rate=83007.52/min [930000], rate=83283.58/min [940000], rate=83803.86/min [950000], rate=84194.98/min [960000], rate=84705.88/min [970000], rate=84839.65/min [980000], rate=85094.07/min [990000], rate=85344.83/min [1000000], rate=85836.91/min [1010000], rate=86079.55/min [1020000], rate=86075.95/min [1030000], rate=86192.47/min [1040000], rate=86307.05/min [1050000], rate=86419.75/min [1060000], rate=86530.61/min [1070000], rate=86756.76/min [1080000], rate=86979.87/min [1090000], rate=87200.00/min [1100000], rate=87417.22/min [1110000], rate=87631.58/min [1120000], rate=87843.14/min [1130000], rate=88051.95/min [1140000], rate=88258.06/min [1150000], rate=88461.54/min [1160000], rate=88101.27/min [1170000], rate=87313.43/min [1180000], rate=86658.51/min [1190000], rate=86127.86/min [1200000], rate=85714.29/min [1210000], rate=85411.76/min [1220000], rate=84918.79/min [1230000], rate=84536.08/min [1240000], rate=84162.90/min [1250000], rate=83986.56/min [1260000], rate=83813.75/min [1270000], rate=83644.35/min [1280000], rate=83660.13/min [1290000], rate=83585.31/min [1300000], rate=83601.29/min [1310000], rate=83617.02/min [1320000], rate=83720.93/min [1330000], rate=83911.67/min [1340000], rate=84188.48/min [1350000], rate=84375.00/min -building interval tree based on /tmp/nxf.MQMkj64SAp/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.10 min). -mapping reads to genes [10000], rate=50000.00/min [20000], rate=54545.45/min [30000], rate=54545.45/min [40000], rate=57142.86/min [50000], rate=58823.53/min [60000], rate=61016.95/min [70000], rate=61764.71/min [80000], rate=63157.89/min [90000], rate=65060.24/min [100000], rate=67415.73/min [110000], rate=68041.24/min [120000], rate=66055.05/min [130000], rate=64462.81/min [140000], rate=62686.57/min [150000], rate=62068.97/min [160000], rate=61935.48/min [170000], rate=62195.12/min [180000], rate=62790.70/min [190000], rate=63687.15/min [200000], rate=64516.13/min [210000], rate=65625.00/min [220000], rate=66666.67/min [230000], rate=67980.30/min [240000], rate=69230.77/min [250000], rate=70754.72/min [260000], rate=72222.22/min [270000], rate=71365.64/min [280000], rate=70588.24/min [290000], rate=69879.52/min [300000], rate=69767.44/min [310000], rate=69402.99/min [320000], rate=69064.75/min [330000], rate=68989.55/min [340000], rate=68686.87/min [350000], rate=68627.45/min [360000], rate=68571.43/min [370000], rate=68730.65/min [380000], rate=68882.18/min [390000], rate=69026.55/min [400000], rate=69565.22/min [410000], rate=69886.36/min [420000], rate=70391.06/min [430000], rate=71468.14/min [440000], rate=71934.60/min [450000], rate=72386.06/min [460000], rate=72823.22/min [470000], rate=73437.50/min [480000], rate=74035.99/min [490000], rate=73316.71/min [500000], rate=72639.23/min [510000], rate=72000.00/min [520000], rate=71559.63/min [530000], rate=70982.14/min [540000], rate=70588.24/min [550000], rate=70512.82/min [560000], rate=70292.89/min [570000], rate=70225.87/min [580000], rate=70161.29/min [590000], rate=70238.10/min [600000], rate=70175.44/min [610000], rate=70114.94/min [620000], rate=70188.68/min [630000], rate=70260.22/min [640000], rate=70201.10/min [650000], rate=70143.88/min [660000], rate=70212.77/min [670000], rate=70526.32/min [680000], rate=70833.33/min [690000], rate=71134.02/min [700000], rate=71550.26/min [710000], rate=71717.17/min [720000], rate=71880.20/min [730000], rate=72277.23/min [740000], rate=72667.76/min [750000], rate=72933.55/min [760000], rate=73548.39/min [770000], rate=73920.00/min [780000], rate=74403.82/min [790000], rate=74881.52/min [800000], rate=74650.08/min [810000], rate=74425.73/min [820000], rate=74208.14/min [830000], rate=74107.14/min [840000], rate=74008.81/min [850000], rate=74127.91/min [860000], rate=74137.93/min [870000], rate=74253.20/min [880000], rate=74471.09/min [890000], rate=74685.31/min [900000], rate=75000.00/min [910000], rate=75310.34/min [920000], rate=75616.44/min [930000], rate=76021.80/min [940000], rate=76630.43/min [950000], rate=77235.77/min [960000], rate=77837.84/min [970000], rate=78436.66/min [980000], rate=78926.17/min [990000], rate=79518.07/min [1000000], rate=80106.81/min [1010000], rate=80371.35/min [1020000], rate=80632.41/min [1030000], rate=80890.05/min [1040000], rate=80620.16/min [1050000], rate=80357.14/min [1060000], rate=80100.76/min [1070000], rate=80049.88/min [1080000], rate=79901.36/min [1090000], rate=79853.48/min [1100000], rate=79806.53/min [1110000], rate=79951.98/min [1120000], rate=80000.00/min [1130000], rate=80141.84/min [1140000], rate=80281.69/min [1150000], rate=80513.42/min [1160000], rate=81118.88/min [1170000], rate=81344.15/min [1180000], rate=81660.90/min [1190000], rate=81880.73/min [1200000], rate=81911.26/min [1210000], rate=81848.93/min [1220000], rate=81787.71/min [1230000], rate=81818.18/min [1240000], rate=81758.24/min [1250000], rate=81877.73/min [1260000], rate=81906.83/min [1270000], rate=81935.48/min [1280000], rate=82051.28/min [1290000], rate=82252.92/min [1300000], rate=82452.43/min [1310000], rate=82649.84/min [1320000], rate=83018.87/min [1330000], rate=83298.54/min [1340000], rate=83575.88/min [1350000], rate=83764.22/min -building interval tree based on /tmp/nxf.MQMkj64SAp/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.08 min). -mapping reads to genes [10000], rate=150000.00/min [20000], rate=150000.00/min [30000], rate=163636.36/min [40000], rate=150000.00/min [50000], rate=166666.67/min [60000], rate=171428.57/min [70000], rate=175000.00/min [80000], rate=200000.00/min [90000], rate=225000.00/min [100000], rate=230769.23/min [110000], rate=227586.21/min [120000], rate=211764.71/min [130000], rate=210810.81/min [140000], rate=204878.05/min [150000], rate=209302.33/min [160000], rate=208695.65/min [170000], rate=208163.27/min [180000], rate=220408.16/min [190000], rate=228000.00/min [200000], rate=226415.09/min [210000], rate=229090.91/min [220000], rate=227586.21/min [230000], rate=219047.62/min [240000], rate=218181.82/min [250000], rate=220588.24/min [260000], rate=219718.31/min [270000], rate=218918.92/min [280000], rate=224000.00/min [290000], rate=223076.92/min [300000], rate=225000.00/min [310000], rate=218823.53/min [320000], rate=218181.82/min [330000], rate=215217.39/min [340000], rate=219354.84/min [350000], rate=216494.85/min [360000], rate=220408.16/min [370000], rate=201818.18/min [380000], rate=165217.39/min [390000], rate=146250.00/min [400000], rate=135593.22/min [410000], rate=127461.14/min [420000], rate=120000.00/min [430000], rate=115178.57/min [440000], rate=110000.00/min [450000], rate=105468.75/min [460000], rate=102602.23/min [470000], rate=99295.77/min [480000], rate=96644.30/min [490000], rate=94230.77/min [500000], rate=92024.54/min [510000], rate=89736.07/min [520000], rate=88385.27/min [530000], rate=86648.50/min [540000], rate=85039.37/min [550000], rate=83333.33/min [560000], rate=81553.40/min [570000], rate=80470.59/min [580000], rate=79633.87/min [590000], rate=78841.87/min [600000], rate=78260.87/min [610000], rate=77707.01/min [620000], rate=77178.42/min [630000], rate=76829.27/min [640000], rate=76341.95/min [650000], rate=75875.49/min [660000], rate=75428.57/min [670000], rate=75000.00/min [680000], rate=74862.39/min [690000], rate=74594.59/min [700000], rate=74336.28/min [710000], rate=74216.03/min [720000], rate=74099.49/min [730000], rate=73861.72/min [740000], rate=73754.15/min [750000], rate=73770.49/min [760000], rate=73786.41/min [770000], rate=73920.00/min [780000], rate=74050.63/min [790000], rate=74178.40/min [800000], rate=74418.60/min [810000], rate=74654.38/min [820000], rate=75000.00/min [830000], rate=75340.39/min [840000], rate=75675.68/min [850000], rate=76005.96/min [860000], rate=76331.36/min [870000], rate=76315.79/min [880000], rate=76190.48/min [890000], rate=76176.89/min [900000], rate=76271.19/min [910000], rate=76363.64/min [920000], rate=76454.29/min [930000], rate=76648.35/min [940000], rate=76734.69/min [950000], rate=76819.41/min [960000], rate=76800.00/min [970000], rate=76882.43/min [980000], rate=76963.35/min [990000], rate=77042.80/min [1000000], rate=77220.08/min [1010000], rate=77295.92/min [1020000], rate=77566.54/min [1030000], rate=77735.85/min [1040000], rate=78000.00/min [1050000], rate=78163.77/min [1060000], rate=78421.70/min [1070000], rate=78773.01/min [1080000], rate=79120.88/min [1090000], rate=78511.40/min [1100000], rate=78014.18/min [1110000], rate=77622.38/min [1120000], rate=77330.26/min [1130000], rate=77133.11/min [1140000], rate=76853.93/min [1150000], rate=76496.67/min [1160000], rate=76065.57/min [1170000], rate=75728.16/min [1180000], rate=75479.74/min [1190000], rate=75237.09/min [1200000], rate=75078.21/min [1210000], rate=74922.60/min [1220000], rate=74846.63/min [1230000], rate=74847.87/min [1240000], rate=74849.09/min [1250000], rate=74775.67/min [1260000], rate=74703.56/min [1270000], rate=74705.88/min [1280000], rate=74780.92/min [1290000], rate=74854.93/min [1300000], rate=74856.05/min [1310000], rate=75000.00/min [1320000], rate=75213.68/min [1330000], rate=75425.33/min [1340000], rate=75706.21/min [1350000], rate=75913.78/min -building interval tree based on /tmp/nxf.MQMkj64SAp/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=50000.00/min [20000], rate=48000.00/min [30000], rate=51428.57/min [40000], rate=52173.91/min [50000], rate=53571.43/min [60000], rate=55384.62/min [70000], rate=56756.76/min [80000], rate=57831.33/min [90000], rate=58695.65/min [100000], rate=59405.94/min [110000], rate=61111.11/min [120000], rate=62068.97/min [130000], rate=63934.43/min [140000], rate=65625.00/min [150000], rate=67669.17/min [160000], rate=69565.22/min [170000], rate=71328.67/min [180000], rate=73972.60/min [190000], rate=76000.00/min [200000], rate=77419.35/min [210000], rate=78260.87/min [220000], rate=79518.07/min [230000], rate=80701.75/min [240000], rate=81818.18/min [250000], rate=81967.21/min [260000], rate=81675.39/min [270000], rate=79802.96/min [280000], rate=76712.33/min [290000], rate=76315.79/min [300000], rate=76271.19/min [310000], rate=76229.51/min [320000], rate=76494.02/min [330000], rate=77042.80/min [340000], rate=77566.54/min [350000], rate=78358.21/min [360000], rate=79411.76/min [370000], rate=81021.90/min [380000], rate=82310.47/min [390000], rate=83571.43/min [400000], rate=85106.38/min [410000], rate=86315.79/min [420000], rate=86896.55/min [430000], rate=86287.63/min [440000], rate=85714.29/min [450000], rate=85173.50/min [460000], rate=84403.67/min [470000], rate=84179.10/min [480000], rate=83965.01/min [490000], rate=84000.00/min [500000], rate=84033.61/min [510000], rate=84530.39/min [520000], rate=84782.61/min [530000], rate=85254.69/min [540000], rate=85039.37/min [550000], rate=82914.57/min [560000], rate=81355.93/min [570000], rate=80281.69/min [580000], rate=80000.00/min [590000], rate=79017.86/min [600000], rate=78431.37/min [610000], rate=78205.13/min [620000], rate=77987.42/min [630000], rate=77777.78/min [640000], rate=77575.76/min [650000], rate=77075.10/min [660000], rate=76893.20/min [670000], rate=76717.56/min [680000], rate=76547.84/min [690000], rate=75963.30/min [700000], rate=75949.37/min [710000], rate=75935.83/min [720000], rate=75922.67/min [730000], rate=75909.88/min [740000], rate=75767.92/min [750000], rate=75630.25/min [760000], rate=75621.89/min [770000], rate=75613.75/min [780000], rate=75483.87/min [790000], rate=75477.71/min [800000], rate=75471.70/min [810000], rate=75583.20/min [820000], rate=75576.04/min [830000], rate=75569.04/min [840000], rate=75562.22/min [850000], rate=75667.66/min [860000], rate=75659.82/min [870000], rate=75761.97/min [880000], rate=75862.07/min [890000], rate=75960.17/min [900000], rate=76271.19/min [910000], rate=76577.84/min [920000], rate=76880.22/min [930000], rate=77178.42/min [940000], rate=76630.43/min [950000], rate=75898.80/min [960000], rate=75491.48/min [970000], rate=75096.77/min [980000], rate=74809.16/min [990000], rate=74436.09/min [1000000], rate=74074.07/min [1010000], rate=73722.63/min [1020000], rate=73469.39/min [1030000], rate=73309.61/min [1040000], rate=73067.92/min [1050000], rate=73001.16/min [1060000], rate=72935.78/min [1070000], rate=72954.55/min [1080000], rate=72972.97/min [1090000], rate=73072.63/min [1100000], rate=73170.73/min [1110000], rate=73026.32/min [1120000], rate=73043.48/min [1130000], rate=72903.23/min [1140000], rate=72998.93/min [1150000], rate=73093.22/min [1160000], rate=73263.16/min [1170000], rate=73430.96/min [1180000], rate=73596.67/min [1190000], rate=73836.61/min [1200000], rate=74074.07/min [1210000], rate=74233.13/min [1220000], rate=74541.75/min [1230000], rate=74847.87/min [1240000], rate=75075.68/min [1250000], rate=75301.20/min [1260000], rate=75223.88/min [1270000], rate=74852.65/min [1280000], rate=74563.11/min [1290000], rate=74209.01/min [1300000], rate=73863.64/min [1310000], rate=73595.51/min [1320000], rate=73333.33/min [1330000], rate=73278.24/min [1340000], rate=73090.91/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.MQMkj64SAp/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.MQMkj64SAp/ctat_genome_lib_build_dir --filt_file /tmp/nxf.MQMkj64SAp/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.MQMkj64SAp/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -parsing /tmp/nxf.MQMkj64SAp/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info. 0.00 reads per min processed... 12000000.00 reads per min processed... 18000000.00 reads per min processed... 12000000.00 reads per min processed... 7500000.00 reads per min processed... 7200000.00 reads per min processed... 7000000.00 reads per min processed... 6000000.00 reads per min processed... 5400000.00 reads per min processed... 5454545.45 reads per min processed... 5076923.08 reads per min processed... 5142857.14 reads per min processed... 4875000.00 reads per min processed... 4941176.47 reads per min processed... 5000000.00 reads per min processed... 4800000.00 reads per min processed... 4857142.86 reads per min processed... 4695652.17 reads per min processed... 4560000.00 reads per min processed... 4615384.62 reads per min processed... 4666666.67 reads per min processed... 4551724.14 reads per min processed... 4600000.00 reads per min processed... 4645161.29 reads per min processed... 4687500.00 reads per min processed... 4727272.73 reads per min processed... 4628571.43 reads per min processed... 4666666.67 reads per min processed... 4702702.70 reads per min processed... 4864864.86 reads per min processed... 4894736.84 reads per min processed... 4923076.92 reads per min processed... 4950000.00 reads per min processed... 4975609.76 reads per min processed... 5000000.00 reads per min processed... 5023255.81 reads per min processed... 4933333.33 reads per min processed... 4956521.74 reads per min processed... 4978723.40 reads per min processed... 5000000.00 reads per min processed... 4920000.00 reads per min processed... 4941176.47 reads per min processed... 4961538.46 reads per min processed... 4981132.08 reads per min processed... 5000000.00 reads per min processed... 4928571.43 reads per min processed... done. * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.MQMkj64SAp/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.MQMkj64SAp/./star-fusion.preliminary/star-fusion -parsing fusion evidence: /tmp/nxf.MQMkj64SAp/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -outputting fusion candidates to file: /tmp/nxf.MQMkj64SAp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.MQMkj64SAp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.MQMkj64SAp/659_Dl-T1-TRNA-1_B23WHTKLT4_1.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.MQMkj64SAp/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.MQMkj64SAp/./star-fusion.preliminary/star-fusion CMD: mkdir -p /tmp/nxf.MQMkj64SAp/./star-fusion.preliminary/star-fusion.filter.intermediates_dir EM: Starting log likelihood: -96885.500865 EM: Round [1] log likelihood: -96816.480396 EM: Round [2] log likelihood: -96790.106646 EM: Round [3] log likelihood: -96777.244412 EM: Round [4] log likelihood: -96770.421501 EM: Round [5] log likelihood: -96766.665305 EM: Round [6] log likelihood: -96764.531721 EM: Round [7] log likelihood: -96763.274139 EM: Round [8] log likelihood: -96762.499841 EM: Round [9] log likelihood: -96761.999766 EM: Round [10] log likelihood: -96761.660698 EM: Round [11] log likelihood: -96761.419901 EM: Round [12] log likelihood: -96761.241636 EM: Round [13] log likelihood: -96761.104895 EM: Round [14] log likelihood: -96760.996892 EM: Round [15] log likelihood: -96760.909557 EM: Round [16] log likelihood: -96760.837598 EM: Round [17] log likelihood: -96760.777419 EM: Round [18] log likelihood: -96760.726484 EM: Round [19] log likelihood: -96760.682949 EM: Round [20] log likelihood: -96760.645436 EM: Round [21] log likelihood: -96760.612886 EM: Round [22] log likelihood: -96760.584471 EM: Round [23] log likelihood: -96760.559533 EM: Round [24] log likelihood: -96760.537538 EM: Round [25] log likelihood: -96760.518052 EM: Round [26] log likelihood: -96760.500717 EM: Round [27] log likelihood: -96760.485232 EM: Round [28] log likelihood: -96760.471347 EM: Round [29] log likelihood: -96760.458852 EM: Round [30] log likelihood: -96760.447568 EM: Round [31] log likelihood: -96760.437342 EM: Round [32] log likelihood: -96760.428045 EM: Round [33] log likelihood: -96760.419564 EM: Round [34] log likelihood: -96760.411805 EM: Round [35] log likelihood: -96760.404683 EM: Round [36] log likelihood: -96760.398128 EM: Round [37] log likelihood: -96760.392077 EM: Round [38] log likelihood: -96760.386476 EM: Round [39] log likelihood: -96760.381277 EM: Round [40] log likelihood: -96760.376440 EM: Round [41] log likelihood: -96760.371927 EM: Round [42] log likelihood: -96760.367707 EM: Round [43] log likelihood: -96760.363753 EM: Round [44] log likelihood: -96760.360039 EM: Round [45] log likelihood: -96760.356543 EM: Round [46] log likelihood: -96760.353246 EM: Round [47] log likelihood: -96760.350131 EM: Round [48] log likelihood: -96760.347182 EM: Round [49] log likelihood: -96760.344385 EM: Round [50] log likelihood: -96760.341730 EM: Round [51] log likelihood: -96760.339203 EM: Round [52] log likelihood: -96760.336796 EM: Round [53] log likelihood: -96760.334500 EM: Round [54] log likelihood: -96760.332307 EM: Round [55] log likelihood: -96760.330209 EM: Round [56] log likelihood: -96760.328200 EM: Round [57] log likelihood: -96760.326275 EM: Round [58] log likelihood: -96760.324427 EM: Round [59] log likelihood: -96760.322653 EM: Round [60] log likelihood: -96760.320947 EM: Round [61] log likelihood: -96760.319306 EM: Round [62] log likelihood: -96760.317726 EM: Round [63] log likelihood: -96760.316203 EM: Round [64] log likelihood: -96760.314734 EM: Round [65] log likelihood: -96760.313317 EM: Round [66] log likelihood: -96760.311949 EM: Round [67] log likelihood: -96760.310628 EM: Round [68] log likelihood: -96760.309350 EM: Round [69] log likelihood: -96760.308115 EM: Round [70] log likelihood: -96760.306920 EM: Round [71] log likelihood: -96760.305763 EM: Round [72] log likelihood: -96760.304643 EM: Round [73] log likelihood: -96760.303559 EM: Round [74] log likelihood: -96760.302508 EM: Round [75] log likelihood: -96760.301489 EM: Round [76] log likelihood: -96760.300501 EM: Round [77] log likelihood: -96760.299544 EM: Round [78] log likelihood: -96760.298614 EM: Round [79] log likelihood: -96760.297713 EM: Round [80] log likelihood: -96760.296838 EM: Round [81] log likelihood: -96760.295989 EM: Round [82] log likelihood: -96760.295164 EM: Round [83] log likelihood: -96760.294364 EM: Round [84] log likelihood: -96760.293586 EM: Round [85] log likelihood: -96760.292831 EM: Round [86] log likelihood: -96760.292097 EM: Round [87] log likelihood: -96760.291385 EM: Round [88] log likelihood: -96760.290692 EM: Round [89] log likelihood: -96760.290019 EM: Round [90] log likelihood: -96760.289365 EM: Round [91] log likelihood: -96760.288729 EM: Round [92] log likelihood: -96760.288111 EM: Round [93] log likelihood: -96760.287510 EM: Round [94] log likelihood: -96760.286926 EM: Round [95] log likelihood: -96760.286358 EM: Round [96] log likelihood: -96760.285806 EM: Round [97] log likelihood: -96760.285269 EM: Round [98] log likelihood: -96760.284747 EM: Round [99] log likelihood: -96760.284239 EM: Round [100] log likelihood: -96760.283746 EM: Round [101] log likelihood: -96760.283266 EM: Round [102] log likelihood: -96760.282799 EM: Round [103] log likelihood: -96760.282344 EM: Round [104] log likelihood: -96760.281903 EM: Round [105] log likelihood: -96760.281473 EM: Round [106] log likelihood: -96760.281055 EM: Round [107] log likelihood: -96760.280648 EM: Round [108] log likelihood: -96760.280253 EM: Round [109] log likelihood: -96760.279868 EM: Round [110] log likelihood: -96760.279494 EM: Round [111] log likelihood: -96760.279130 EM: Round [112] log likelihood: -96760.278776 EM: Round [113] log likelihood: -96760.278431 EM: Round [114] log likelihood: -96760.278096 EM: Round [115] log likelihood: -96760.277770 EM: Round [116] log likelihood: -96760.277453 EM: Round [117] log likelihood: -96760.277145 EM: Round [118] log likelihood: -96760.276844 EM: Round [119] log likelihood: -96760.276552 EM: Round [120] log likelihood: -96760.276268 EM: Round [121] log likelihood: -96760.275992 EM: Round [122] log likelihood: -96760.275723 EM: Round [123] log likelihood: -96760.275462 EM: Round [124] log likelihood: -96760.275207 EM: Round [125] log likelihood: -96760.274960 EM: Round [126] log likelihood: -96760.274719 EM: Round [127] log likelihood: -96760.274484 EM: Round [128] log likelihood: -96760.274256 EM: Round [129] log likelihood: -96760.274035 EM: Round [130] log likelihood: -96760.273819 EM: Round [131] log likelihood: -96760.273609 EM: Round [132] log likelihood: -96760.273405 EM: Round [133] log likelihood: -96760.273206 EM: Round [134] log likelihood: -96760.273013 EM: Round [135] log likelihood: -96760.272825 EM: Round [136] log likelihood: -96760.272642 EM: Round [137] log likelihood: -96760.272464 EM: Round [138] log likelihood: -96760.272291 EM: Round [139] log likelihood: -96760.272122 EM: Round [140] log likelihood: -96760.271958 EM: Round [141] log likelihood: -96760.271799 EM: Round [142] log likelihood: -96760.271643 EM: Round [143] log likelihood: -96760.271492 EM: Round [144] log likelihood: -96760.271345 EM: Round [145] log likelihood: -96760.271203 EM: Round [146] log likelihood: -96760.271063 EM: Round [147] log likelihood: -96760.270928 EM: Round [148] log likelihood: -96760.270796 EM: Round [149] log likelihood: -96760.270668 EM: Round [150] log likelihood: -96760.270544 EM: Round [151] log likelihood: -96760.270422 EM: Round [152] log likelihood: -96760.270304 EM: Round [153] log likelihood: -96760.270190 EM: Round [154] log likelihood: -96760.270078 EM: Round [155] log likelihood: -96760.269969 EM: Round [156] log likelihood: -96760.269863 EM: Round [157] log likelihood: -96760.269760 EM: Round [158] log likelihood: -96760.269660 EM: Round [159] log likelihood: -96760.269563 EM: Stopping iterations at round 159 due to insufficient improvement in likelihood. EM: Starting log likelihood: -96795.772761 EM: Round [1] log likelihood: -96737.933943 EM: Round [2] log likelihood: -96715.706792 EM: Round [3] log likelihood: -96704.987490 EM: Round [4] log likelihood: -96699.360109 EM: Round [5] log likelihood: -96696.284616 EM: Round [6] log likelihood: -96694.545579 EM: Round [7] log likelihood: -96693.523126 EM: Round [8] log likelihood: -96692.894080 EM: Round [9] log likelihood: -96692.487301 EM: Round [10] log likelihood: -96692.210462 EM: Round [11] log likelihood: -96692.012614 EM: Round [12] log likelihood: -96691.864880 EM: Round [13] log likelihood: -96691.750389 EM: Round [14] log likelihood: -96691.658940 EM: Round [15] log likelihood: -96691.584131 EM: Round [16] log likelihood: -96691.521788 EM: Round [17] log likelihood: -96691.469075 EM: Round [18] log likelihood: -96691.423996 EM: Round [19] log likelihood: -96691.385092 EM: Round [20] log likelihood: -96691.351268 EM: Round [21] log likelihood: -96691.321674 EM: Round [22] log likelihood: -96691.295642 EM: Round [23] log likelihood: -96691.272633 EM: Round [24] log likelihood: -96691.252207 EM: Round [25] log likelihood: -96691.234003 EM: Round [26] log likelihood: -96691.217717 EM: Round [27] log likelihood: -96691.203095 EM: Round [28] log likelihood: -96691.189923 EM: Round [29] log likelihood: -96691.178017 EM: Round [30] log likelihood: -96691.167222 EM: Round [31] log likelihood: -96691.157403 EM: Round [32] log likelihood: -96691.148445 EM: Round [33] log likelihood: -96691.140249 EM: Round [34] log likelihood: -96691.132728 EM: Round [35] log likelihood: -96691.125808 EM: Round [36] log likelihood: -96691.119422 EM: Round [37] log likelihood: -96691.113514 EM: Round [38] log likelihood: -96691.108034 EM: Round [39] log likelihood: -96691.102939 EM: Round [40] log likelihood: -96691.098190 EM: Round [41] log likelihood: -96691.093753 EM: Round [42] log likelihood: -96691.089599 EM: Round [43] log likelihood: -96691.085700 EM: Round [44] log likelihood: -96691.082034 EM: Round [45] log likelihood: -96691.078580 EM: Round [46] log likelihood: -96691.075320 EM: Round [47] log likelihood: -96691.072236 EM: Round [48] log likelihood: -96691.069315 EM: Round [49] log likelihood: -96691.066543 EM: Round [50] log likelihood: -96691.063908 EM: Round [51] log likelihood: -96691.061400 EM: Round [52] log likelihood: -96691.059010 EM: Round [53] log likelihood: -96691.056729 EM: Round [54] log likelihood: -96691.054549 EM: Round [55] log likelihood: -96691.052462 EM: Round [56] log likelihood: -96691.050464 EM: Round [57] log likelihood: -96691.048548 EM: Round [58] log likelihood: -96691.046709 EM: Round [59] log likelihood: -96691.044942 EM: Round [60] log likelihood: -96691.043243 EM: Round [61] log likelihood: -96691.041608 EM: Round [62] log likelihood: -96691.040034 EM: Round [63] log likelihood: -96691.038516 EM: Round [64] log likelihood: -96691.037052 EM: Round [65] log likelihood: -96691.035639 EM: Round [66] log likelihood: -96691.034275 EM: Round [67] log likelihood: -96691.032957 EM: Round [68] log likelihood: -96691.031683 EM: Round [69] log likelihood: -96691.030451 EM: Round [70] log likelihood: -96691.029258 EM: Round [71] log likelihood: -96691.028104 EM: Round [72] log likelihood: -96691.026987 EM: Round [73] log likelihood: -96691.025904 EM: Round [74] log likelihood: -96691.024855 EM: Round [75] log likelihood: -96691.023838 EM: Round [76] log likelihood: -96691.022852 EM: Round [77] log likelihood: -96691.021896 EM: Round [78] log likelihood: -96691.020968 EM: Round [79] log likelihood: -96691.020068 EM: Round [80] log likelihood: -96691.019194 EM: Round [81] log likelihood: -96691.018346 EM: Round [82] log likelihood: -96691.017523 EM: Round [83] log likelihood: -96691.016723 EM: Round [84] log likelihood: -96691.015947 EM: Round [85] log likelihood: -96691.015192 EM: Round [86] log likelihood: -96691.014460 EM: Round [87] log likelihood: -96691.013748 EM: Round [88] log likelihood: -96691.013056 EM: Round [89] log likelihood: -96691.012383 EM: Round [90] log likelihood: -96691.011730 EM: Round [91] log likelihood: -96691.011095 EM: Round [92] log likelihood: -96691.010477 EM: Round [93] log likelihood: -96691.009877 EM: Round [94] log likelihood: -96691.009293 EM: Round [95] log likelihood: -96691.008726 EM: Round [96] log likelihood: -96691.008174 EM: Round [97] log likelihood: -96691.007637 EM: Round [98] log likelihood: -96691.007116 EM: Round [99] log likelihood: -96691.006608 EM: Round [100] log likelihood: -96691.006115 EM: Round [101] log likelihood: -96691.005635 EM: Round [102] log likelihood: -96691.005168 EM: Round [103] log likelihood: -96691.004714 EM: Round [104] log likelihood: -96691.004273 EM: Round [105] log likelihood: -96691.003843 EM: Round [106] log likelihood: -96691.003426 EM: Round [107] log likelihood: -96691.003019 EM: Round [108] log likelihood: -96691.002624 EM: Round [109] log likelihood: -96691.002239 EM: Round [110] log likelihood: -96691.001865 EM: Round [111] log likelihood: -96691.001502 EM: Round [112] log likelihood: -96691.001148 EM: Round [113] log likelihood: -96691.000803 EM: Round [114] log likelihood: -96691.000468 EM: Round [115] log likelihood: -96691.000143 EM: Round [116] log likelihood: -96690.999826 EM: Round [117] log likelihood: -96690.999517 EM: Round [118] log likelihood: -96690.999217 EM: Round [119] log likelihood: -96690.998925 EM: Round [120] log likelihood: -96690.998641 EM: Round [121] log likelihood: -96690.998365 EM: Round [122] log likelihood: -96690.998096 EM: Round [123] log likelihood: -96690.997835 EM: Round [124] log likelihood: -96690.997580 EM: Round [125] log likelihood: -96690.997333 EM: Round [126] log likelihood: -96690.997092 EM: Round [127] log likelihood: -96690.996858 EM: Round [128] log likelihood: -96690.996630 EM: Round [129] log likelihood: -96690.996408 EM: Round [130] log likelihood: -96690.996193 EM: Round [131] log likelihood: -96690.995983 EM: Round [132] log likelihood: -96690.995779 EM: Round [133] log likelihood: -96690.995580 EM: Round [134] log likelihood: -96690.995387 EM: Round [135] log likelihood: -96690.995199 EM: Round [136] log likelihood: -96690.995016 EM: Round [137] log likelihood: -96690.994838 EM: Round [138] log likelihood: -96690.994665 EM: Round [139] log likelihood: -96690.994496 EM: Round [140] log likelihood: -96690.994332 EM: Round [141] log likelihood: -96690.994173 EM: Round [142] log likelihood: -96690.994018 EM: Round [143] log likelihood: -96690.993867 EM: Round [144] log likelihood: -96690.993720 EM: Round [145] log likelihood: -96690.993577 EM: Round [146] log likelihood: -96690.993438 EM: Round [147] log likelihood: -96690.993303 EM: Round [148] log likelihood: -96690.993171 EM: Round [149] log likelihood: -96690.993043 EM: Round [150] log likelihood: -96690.992918 EM: Round [151] log likelihood: -96690.992797 EM: Round [152] log likelihood: -96690.992679 EM: Round [153] log likelihood: -96690.992564 EM: Round [154] log likelihood: -96690.992453 EM: Round [155] log likelihood: -96690.992344 EM: Round [156] log likelihood: -96690.992238 EM: Round [157] log likelihood: -96690.992135 EM: Round [158] log likelihood: -96690.992035 EM: Round [159] log likelihood: -96690.991938 EM: Stopping iterations at round 159 due to insufficient improvement in likelihood. CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.MQMkj64SAp/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.MQMkj64SAp/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.MQMkj64SAp/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.MQMkj64SAp/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.MQMkj64SAp/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.MQMkj64SAp/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.MQMkj64SAp/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20 CMD: cp /tmp/nxf.MQMkj64SAp/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.MQMkj64SAp/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.MQMkj64SAp/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.MQMkj64SAp/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged CMD: ln -sf /tmp/nxf.MQMkj64SAp/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.MQMkj64SAp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered * Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.MQMkj64SAp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 150357717 > /tmp/nxf.MQMkj64SAp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM * Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.MQMkj64SAp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.MQMkj64SAp/ctat_genome_lib_build_dir > /tmp/nxf.MQMkj64SAp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.MQMkj64SAp/ctat_genome_lib_build_dir --annotate /tmp/nxf.MQMkj64SAp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.MQMkj64SAp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot * Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.MQMkj64SAp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.MQMkj64SAp/ctat_genome_lib_build_dir -done, see /tmp/nxf.MQMkj64SAp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass * Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.MQMkj64SAp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.MQMkj64SAp/ctat_genome_lib_build_dir -filter_likely_RT_artifacts: (pass: 1016, filtered: 6827) * Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.MQMkj64SAp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001 * Running CMD: cp /tmp/nxf.MQMkj64SAp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv * Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.MQMkj64SAp/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000215478.8] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000274602.5] WARNING, no entry stored in dbm for [ENSG00000259098.1] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000237296.9] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000286103.1] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000286592.1] WARNING, no entry stored in dbm for [ENSG00000280136.2] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000232894.1] WARNING, no entry stored in dbm for [ENSG00000226049.3] WARNING, no entry stored in dbm for [ENSG00000260404.3] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000225255.6] WARNING, no entry stored in dbm for [ENSG00000234420.7] WARNING, no entry stored in dbm for [ENSG00000226026.6] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [ENSG00000207205.1] WARNING, no entry stored in dbm for [ENSG00000224271.7] WARNING, no entry stored in dbm for [ENSG00000283345.1] WARNING, no entry stored in dbm for [ENSG00000215302.8] WARNING, no entry stored in dbm for [ENSG00000261558.2] WARNING, no entry stored in dbm for [ENSG00000251680.6] WARNING, no entry stored in dbm for [ENSG00000288035.1] WARNING, no entry stored in dbm for [ENSG00000128438.10] WARNING, no entry stored in dbm for [ENSG00000158482.10] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000287411.1] WARNING, no entry stored in dbm for [ENSG00000219747.1] WARNING, no entry stored in dbm for [ENSG00000224796.1] WARNING, no entry stored in dbm for [ENSG00000272655.2] WARNING, no entry stored in dbm for [ENSG00000181577.16] WARNING, no entry stored in dbm for [ENSG00000283774.1] WARNING, no entry stored in dbm for [ENSG00000234312.1] WARNING, no entry stored in dbm for [ENSG00000254101.7] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000224086.6] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000224086.6] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000234945.8] WARNING, no entry stored in dbm for [ENSG00000225465.10] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000238105.7] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000250500.1] WARNING, no entry stored in dbm for [ENSG00000230239.1] WARNING, no entry stored in dbm for [ENSG00000228566.2] WARNING, no entry stored in dbm for [ENSG00000257612.2] WARNING, no entry stored in dbm for [ENSG00000228414.7] WARNING, no entry stored in dbm for [ENSG00000283541.1] WARNING, no entry stored in dbm for [ENSG00000248538.8] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000237373.1] WARNING, no entry stored in dbm for [ENSG00000205534.6] WARNING, no entry stored in dbm for [ENSG00000250519.7] WARNING, no entry stored in dbm for [ENSG00000273149.1] WARNING, no entry stored in dbm for [ENSG00000283283.2] WARNING, no entry stored in dbm for [ENSG00000230912.1] WARNING, no entry stored in dbm for [ENSG00000251378.1] WARNING, no entry stored in dbm for [ENSG00000276538.1] WARNING, no entry stored in dbm for [ENSG00000240669.1] WARNING, no entry stored in dbm for [ENSG00000267707.2] WARNING, no entry stored in dbm for [ENSG00000287381.1] WARNING, no entry stored in dbm for [ENSG00000224721.1] WARNING, no entry stored in dbm for [ENSG00000230305.2] WARNING, no entry stored in dbm for [ENSG00000286480.1] WARNING, no entry stored in dbm for [ENSG00000225594.1] WARNING, no entry stored in dbm for [ENSG00000264920.2] WARNING, no entry stored in dbm for [ENSG00000237232.9] WARNING, no entry stored in dbm for [ENSG00000198454.2] WARNING, no entry stored in dbm for [ENSG00000231559.1] WARNING, no entry stored in dbm for [ENSG00000279217.1] WARNING, no entry stored in dbm for [ENSG00000200788.1] WARNING, no entry stored in dbm for [ENSG00000227121.2] WARNING, no entry stored in dbm for [ENSG00000282458.1] WARNING, no entry stored in dbm for [ENSG00000225292.2] WARNING, no entry stored in dbm for [ENSG00000235643.2] WARNING, no entry stored in dbm for [ENSG00000279478.1] WARNING, no entry stored in dbm for [ENSG00000187953.10] WARNING, no entry stored in dbm for [ENSG00000230305.2] WARNING, no entry stored in dbm for [ENSG00000277741.4] WARNING, no entry stored in dbm for [ENSG00000230092.7] WARNING, no entry stored in dbm for [ENSG00000258271.1] WARNING, no entry stored in dbm for [ENSG00000243023.2] WARNING, no entry stored in dbm for [ENSG00000243498.2] WARNING, no entry stored in dbm for [ENSG00000237298.10] WARNING, no entry stored in dbm for [ENSG00000288049.1] WARNING, no entry stored in dbm for [ENSG00000235824.5] WARNING, no entry stored in dbm for [ENSG00000235211.4] WARNING, no entry stored in dbm for [ENSG00000232719.1] WARNING, no entry stored in dbm for [ENSG00000213293.4] WARNING, no entry stored in dbm for [ENSG00000285756.2] WARNING, no entry stored in dbm for [ENSG00000285756.2] WARNING, no entry stored in dbm for [ENSG00000211459.2] WARNING, no entry stored in dbm for [ENSG00000128438.10] WARNING, no entry stored in dbm for [ENSG00000249690.1] WARNING, no entry stored in dbm for [ENSG00000083622.8] WARNING, no entry stored in dbm for [ENSG00000228872.2] WARNING, no entry stored in dbm for [ENSG00000272084.1] WARNING, no entry stored in dbm for [ENSG00000279155.1] WARNING, no entry stored in dbm for [ENSG00000233896.2] WARNING, no entry stored in dbm for [ENSG00000253508.1] WARNING, no entry stored in dbm for [ENSG00000232077.2] WARNING, no entry stored in dbm for [ENSG00000232871.8] WARNING, no entry stored in dbm for [ENSG00000272870.3] WARNING, no entry stored in dbm for [ENSG00000227681.5] WARNING, no entry stored in dbm for [ENSG00000243141.2] WARNING, no entry stored in dbm for [ENSG00000234851.4] WARNING, no entry stored in dbm for [ENSG00000223508.5] WARNING, no entry stored in dbm for [ENSG00000239315.4] WARNING, no entry stored in dbm for [ENSG00000218227.3] WARNING, no entry stored in dbm for [ENSG00000242941.1] WARNING, no entry stored in dbm for [ENSG00000243007.1] WARNING, no entry stored in dbm for [ENSG00000279613.1] WARNING, no entry stored in dbm for [ENSG00000200728.1] WARNING, no entry stored in dbm for [ENSG00000197308.9] WARNING, no entry stored in dbm for [ENSG00000265735.2] WARNING, no entry stored in dbm for [ENSG00000263740.2] WARNING, no entry stored in dbm for [ENSG00000204745.4] WARNING, no entry stored in dbm for [ENSG00000285564.2] WARNING, no entry stored in dbm for [ENSG00000211459.2] WARNING, no entry stored in dbm for [ENSG00000256393.1] WARNING, no entry stored in dbm for [ENSG00000232491.1] WARNING, no entry stored in dbm for [ENSG00000254422.1] WARNING, no entry stored in dbm for [ENSG00000243323.7] WARNING, no entry stored in dbm for [ENSG00000205622.11] WARNING, no entry stored in dbm for [ENSG00000285601.1] WARNING, no entry stored in dbm for [ENSG00000267313.7] WARNING, no entry stored in dbm for [ENSG00000285907.1] WARNING, no entry stored in dbm for [ENSG00000231344.1] WARNING, no entry stored in dbm for [ENSG00000280334.1] WARNING, no entry stored in dbm for [ENSG00000204177.10] WARNING, no entry stored in dbm for [ENSG00000106610.15] WARNING, no entry stored in dbm for [ENSG00000275131.3] WARNING, no entry stored in dbm for [ENSG00000254539.1] WARNING, no entry stored in dbm for [ENSG00000205534.6] WARNING, no entry stored in dbm for [ENSG00000255146.1] WARNING, no entry stored in dbm for [ENSG00000249633.1] WARNING, no entry stored in dbm for [ENSG00000281896.1] WARNING, no entry stored in dbm for [ENSG00000223482.8] WARNING, no entry stored in dbm for [ENSG00000232728.1] WARNING, no entry stored in dbm for [ENSG00000213025.2] WARNING, no entry stored in dbm for [ENSG00000224596.8] WARNING, no entry stored in dbm for [ENSG00000288663.1] WARNING, no entry stored in dbm for [ENSG00000286167.1] WARNING, no entry stored in dbm for [ENSG00000237296.9] WARNING, no entry stored in dbm for [ENSG00000270524.1] WARNING, no entry stored in dbm for [ENSG00000267014.6] WARNING, no entry stored in dbm for [ENSG00000253868.4] WARNING, no entry stored in dbm for [ENSG00000272894.5] WARNING, no entry stored in dbm for [ENSG00000239213.6] WARNING, no entry stored in dbm for [ENSG00000197866.3] WARNING, no entry stored in dbm for [ENSG00000286045.1] WARNING, no entry stored in dbm for [ENSG00000251562.8] WARNING, no entry stored in dbm for [ENSG00000248323.7] WARNING, no entry stored in dbm for [ENSG00000266605.1] WARNING, no entry stored in dbm for [ENSG00000255008.3] WARNING, no entry stored in dbm for [ENSG00000260423.2] WARNING, no entry stored in dbm for [ENSG00000214826.5] WARNING, no entry stored in dbm for [ENSG00000234634.2] WARNING, no entry stored in dbm for [ENSG00000267530.3] WARNING, no entry stored in dbm for [ENSG00000267530.3] WARNING, no entry stored in dbm for [ENSG00000224655.7] WARNING, no entry stored in dbm for [ENSG00000180869.4] WARNING, no entry stored in dbm for [ENSG00000282508.2] WARNING, no entry stored in dbm for [ENSG00000281332.1] WARNING, no entry stored in dbm for [ENSG00000215483.11] WARNING, no entry stored in dbm for [ENSG00000260910.2] WARNING, no entry stored in dbm for [ENSG00000165121.11] WARNING, no entry stored in dbm for [ENSG00000224699.9] WARNING, no entry stored in dbm for [ENSG00000224699.9] WARNING, no entry stored in dbm for [ENSG00000249149.2] WARNING, no entry stored in dbm for [ENSG00000257943.2] WARNING, no entry stored in dbm for [ENSG00000213468.7] WARNING, no entry stored in dbm for [ENSG00000279159.1] WARNING, no entry stored in dbm for [ENSG00000244627.5] WARNING, no entry stored in dbm for [ENSG00000223544.1] WARNING, no entry stored in dbm for [ENSG00000233387.1] WARNING, no entry stored in dbm for [ENSG00000223745.8] WARNING, no entry stored in dbm for [ENSG00000259722.2] WARNING, no entry stored in dbm for [ENSG00000231470.1] WARNING, no entry stored in dbm for [ENSG00000203489.3] WARNING, no entry stored in dbm for [ENSG00000225851.1] WARNING, no entry stored in dbm for [ENSG00000206341.7] WARNING, no entry stored in dbm for [ENSG00000225851.1] WARNING, no entry stored in dbm for [ENSG00000227963.1] WARNING, no entry stored in dbm for [ENSG00000068781.21] WARNING, no entry stored in dbm for [ENSG00000232354.8] WARNING, no entry stored in dbm for [ENSG00000278986.1] WARNING, no entry stored in dbm for [ENSG00000176605.9] WARNING, no entry stored in dbm for [ENSG00000239533.6] WARNING, no entry stored in dbm for [ENSG00000281103.2] WARNING, no entry stored in dbm for [ENSG00000166104.15] WARNING, no entry stored in dbm for [ENSG00000166104.15] WARNING, no entry stored in dbm for [ENSG00000211459.2] WARNING, no entry stored in dbm for [ENSG00000215458.8] WARNING, no entry stored in dbm for [ENSG00000234267.3] WARNING, no entry stored in dbm for [ENSG00000275340.1] WARNING, no entry stored in dbm for [ENSG00000228327.3] WARNING, no entry stored in dbm for [ENSG00000260840.2] WARNING, no entry stored in dbm for [ENSG00000230630.5] WARNING, no entry stored in dbm for [ENSG00000256508.2] WARNING, no entry stored in dbm for [ENSG00000205861.13] WARNING, no entry stored in dbm for [ENSG00000281159.1] WARNING, no entry stored in dbm for [ENSG00000177337.8] WARNING, no entry stored in dbm for [ENSG00000204790.9] WARNING, no entry stored in dbm for [ENSG00000237737.6] WARNING, no entry stored in dbm for [ENSG00000271474.1] WARNING, no entry stored in dbm for [ENSG00000232633.4] WARNING, no entry stored in dbm for [ENSG00000278932.4] WARNING, no entry stored in dbm for [ENSG00000286406.1] WARNING, no entry stored in dbm for [ENSG00000234062.8] WARNING, no entry stored in dbm for [ENSG00000260498.6] WARNING, no entry stored in dbm for [ENSG00000251339.6] WARNING, no entry stored in dbm for [ENSG00000286878.1] WARNING, no entry stored in dbm for [ENSG00000275374.1] WARNING, no entry stored in dbm for [ENSG00000227047.1] WARNING, no entry stored in dbm for [ENSG00000227617.9] WARNING, no entry stored in dbm for [ENSG00000237296.9] WARNING, no entry stored in dbm for [ENSG00000227617.9] WARNING, no entry stored in dbm for [ENSG00000237638.2] WARNING, no entry stored in dbm for [ENSG00000258735.1] WARNING, no entry stored in dbm for [ENSG00000172965.17] WARNING, no entry stored in dbm for [ENSG00000234497.5] WARNING, no entry stored in dbm for [ENSG00000215117.6] WARNING, no entry stored in dbm for [ENSG00000227954.7] WARNING, no entry stored in dbm for [ENSG00000200156.1] WARNING, no entry stored in dbm for [ENSG00000199568.1] WARNING, no entry stored in dbm for [ENSG00000178722.13] WARNING, no entry stored in dbm for [ENSG00000178722.13] WARNING, no entry stored in dbm for [ENSG00000258140.2] WARNING, no entry stored in dbm for [ENSG00000240240.9] WARNING, no entry stored in dbm for [ENSG00000283541.1] WARNING, no entry stored in dbm for [ENSG00000258774.1] WARNING, no entry stored in dbm for [ENSG00000238825.1] WARNING, no entry stored in dbm for [ENSG00000229807.12] WARNING, no entry stored in dbm for [ENSG00000204177.10] WARNING, no entry stored in dbm for [ENSG00000187172.15] WARNING, no entry stored in dbm for [ENSG00000226051.8] WARNING, no entry stored in dbm for [ENSG00000232684.1] WARNING, no entry stored in dbm for [ENSG00000227485.1] WARNING, no entry stored in dbm for [ENSG00000247774.7] WARNING, no entry stored in dbm for [ENSG00000179818.14] WARNING, no entry stored in dbm for [ENSG00000214293.9] WARNING, no entry stored in dbm for [ENSG00000198886.2] WARNING, no entry stored in dbm for [ENSG00000284639.1] WARNING, no entry stored in dbm for [ENSG00000249188.1] WARNING, no entry stored in dbm for [ENSG00000254905.1] WARNING, no entry stored in dbm for [ENSG00000226658.1] WARNING, no entry stored in dbm for [ENSG00000284233.1] WARNING, no entry stored in dbm for [ENSG00000251600.8] WARNING, no entry stored in dbm for [ENSG00000250441.1] WARNING, no entry stored in dbm for [ENSG00000237037.9] WARNING, no entry stored in dbm for [ENSG00000230006.7] WARNING, no entry stored in dbm for [ENSG00000237461.2] WARNING, no entry stored in dbm for [ENSG00000258561.2] WARNING, no entry stored in dbm for [ENSG00000286340.1] WARNING, no entry stored in dbm for [ENSG00000246203.2] WARNING, no entry stored in dbm for [ENSG00000261573.1] WARNING, no entry stored in dbm for [ENSG00000273149.1] WARNING, no entry stored in dbm for [ENSG00000272009.1] WARNING, no entry stored in dbm for [ENSG00000284747.1] WARNING, no entry stored in dbm for [ENSG00000272277.1] WARNING, no entry stored in dbm for [ENSG00000280011.1] WARNING, no entry stored in dbm for [ENSG00000228408.6] WARNING, no entry stored in dbm for [ENSG00000215022.7] WARNING, no entry stored in dbm for [ENSG00000213107.2] WARNING, no entry stored in dbm for [ENSG00000265018.6] WARNING, no entry stored in dbm for [ENSG00000230869.1] WARNING, no entry stored in dbm for [ENSG00000273225.4] WARNING, no entry stored in dbm for [ENSG00000225778.5] WARNING, no entry stored in dbm for [ENSG00000218052.5] WARNING, no entry stored in dbm for [ENSG00000286912.1] WARNING, no entry stored in dbm for [ENSG00000280211.1] WARNING, no entry stored in dbm for [ENSG00000276216.1] WARNING, no entry stored in dbm for [ENSG00000276216.1] WARNING, no entry stored in dbm for [ENSG00000284964.1] WARNING, no entry stored in dbm for [ENSG00000281741.2] WARNING, no entry stored in dbm for [ENSG00000203825.4] WARNING, no entry stored in dbm for [ENSG00000282572.2] WARNING, no entry stored in dbm for [ENSG00000228327.3] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000286830.1] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000286830.1] WARNING, no entry stored in dbm for [ENSG00000246596.7] WARNING, no entry stored in dbm for [ENSG00000233296.2] WARNING, no entry stored in dbm for [ENSG00000261273.1] WARNING, no entry stored in dbm for [ENSG00000260413.1] WARNING, no entry stored in dbm for [ENSG00000215302.8] WARNING, no entry stored in dbm for [ENSG00000205534.6] WARNING, no entry stored in dbm for [ENSG00000215302.8] WARNING, no entry stored in dbm for [ENSG00000280351.2] WARNING, no entry stored in dbm for [ENSG00000257526.2] WARNING, no entry stored in dbm for [ENSG00000238015.2] WARNING, no entry stored in dbm for [ENSG00000250969.1] WARNING, no entry stored in dbm for [ENSG00000286152.1] WARNING, no entry stored in dbm for [ENSG00000249125.2] WARNING, no entry stored in dbm for [ENSG00000249022.2] WARNING, no entry stored in dbm for [ENSG00000276538.1] WARNING, no entry stored in dbm for [ENSG00000239969.5] WARNING, no entry stored in dbm for [ENSG00000266918.1] WARNING, no entry stored in dbm for [ENSG00000272134.1] WARNING, no entry stored in dbm for [ENSG00000259418.1] WARNING, no entry stored in dbm for [ENSG00000255197.6] WARNING, no entry stored in dbm for [ENSG00000264151.6] WARNING, no entry stored in dbm for [ENSG00000236377.1] WARNING, no entry stored in dbm for [ENSG00000287022.1] WARNING, no entry stored in dbm for [ENSG00000253988.1] WARNING, no entry stored in dbm for [ENSG00000288663.1] WARNING, no entry stored in dbm for [ENSG00000275223.1] WARNING, no entry stored in dbm for [ENSG00000226087.2] WARNING, no entry stored in dbm for [ENSG00000267287.1] WARNING, no entry stored in dbm for [ENSG00000279421.1] WARNING, no entry stored in dbm for [ENSG00000267002.4] WARNING, no entry stored in dbm for [ENSG00000276101.1] WARNING, no entry stored in dbm for [ENSG00000257817.2] WARNING, no entry stored in dbm for [ENSG00000256802.2] WARNING, no entry stored in dbm for [ENSG00000285106.2] WARNING, no entry stored in dbm for [ENSG00000269032.1] WARNING, no entry stored in dbm for [ENSG00000236679.2] WARNING, no entry stored in dbm for [ENSG00000259203.2] WARNING, no entry stored in dbm for [ENSG00000236890.2] WARNING, no entry stored in dbm for [ENSG00000230979.3] WARNING, no entry stored in dbm for [ENSG00000186148.13] WARNING, no entry stored in dbm for [ENSG00000228835.1] WARNING, no entry stored in dbm for [ENSG00000228835.1] WARNING, no entry stored in dbm for [ENSG00000267723.1] WARNING, no entry stored in dbm for [ENSG00000229738.1] WARNING, no entry stored in dbm for [ENSG00000253133.2] WARNING, no entry stored in dbm for [ENSG00000260198.1] WARNING, no entry stored in dbm for [ENSG00000278912.1] WARNING, no entry stored in dbm for [ENSG00000253155.1] WARNING, no entry stored in dbm for [ENSG00000283041.1] WARNING, no entry stored in dbm for [ENSG00000283041.1] WARNING, no entry stored in dbm for [ENSG00000280392.1] WARNING, no entry stored in dbm for [ENSG00000280392.1] WARNING, no entry stored in dbm for [ENSG00000204929.13] WARNING, no entry stored in dbm for [ENSG00000278156.2] WARNING, no entry stored in dbm for [ENSG00000258587.1] WARNING, no entry stored in dbm for [ENSG00000269968.1] WARNING, no entry stored in dbm for [ENSG00000226824.7] WARNING, no entry stored in dbm for [ENSG00000230305.2] WARNING, no entry stored in dbm for [ENSG00000286480.1] WARNING, no entry stored in dbm for [ENSG00000243554.1] WARNING, no entry stored in dbm for [ENSG00000258423.1] WARNING, no entry stored in dbm for [ENSG00000230137.1] WARNING, no entry stored in dbm for [ENSG00000263272.1] WARNING, no entry stored in dbm for [ENSG00000281376.1] WARNING, no entry stored in dbm for [ENSG00000281376.1] WARNING, no entry stored in dbm for [ENSG00000237296.9] * STAR-Fusion complete. See output: /tmp/nxf.MQMkj64SAp/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)