AIH curated blacklist: matched 6 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 232
Pass (FILTER=PASS): 20 (8.6%)
Fail (FILTER=FAIL): 212 (91.4%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 6
All 6 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 64
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 21
confidence_below_min(low<high): 20
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 18
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 13
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 12
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 12
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 8
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 7
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 7
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 6
confidence_below_min(medium<high);aih_curated_blacklist: 3
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 3
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 2
Breakdown by confidence:
high: 20 pass, 2 fail (total: 22)
low: 0 pass, 101 fail (total: 101)
medium: 0 pass, 109 fail (total: 109)
Arriba filter: 232 rows -> 20 PASS; wrote tih_rna_sample_00150_B23WHTKLT4_2.arriba.fusions.filtered.tsv and tih_rna_sample_00150_B23WHTKLT4_2.arriba.fusions.filtered_pass_only.tsv
Summary written to: tih_rna_sample_00150_B23WHTKLT4_2.arriba.fusions.filter_summary.txt