Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/34/08c1e98a99f08a3036b780182f478c/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/34/08c1e98a99f08a3036b780182f478c/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/24/3f4bd0d282cd5ae49157523877f48f/659_ciZ-T1-TRNA-1_B23WHTKLT4_1.features.csv
==> STAGING COMPLETE (3 inputs)

Predicting contamination for 1 sample(s)...
Detection threshold: VAF_p90 < 0.9999
Level estimation: contamination_pct = -215.87 * vaf_p90 + 215.65

  659_ciZ-T1-TRNA-1_B23WHTKLT4_1: vaf_p90=1.000000 -> CLEAN

Output saved to: 659_ciZ-T1-TRNA-1_B23WHTKLT4_1.predictions.csv
Summary: 0/1 samples flagged as contaminated