File Info

Filename
fi_workdir/Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/19/967eb981d6c2609fba9dcadeb37c3f/fi_workdir/Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 08 10:01:50
                             Started mapping on |	Jun 08 10:08:18
                                    Finished on |	Jun 08 11:09:33
       Mapping speed, Million of reads per hour |	290.11

                          Number of input reads |	296153839
                      Average input read length |	261
                                    UNIQUE READS:
                   Uniquely mapped reads number |	286371940
                        Uniquely mapped reads % |	96.70%
                          Average mapped length |	260.43
                       Number of splices: Total |	326106725
            Number of splices: Annotated (sjdb) |	321103626
                       Number of splices: GT/AG |	322302083
                       Number of splices: GC/AG |	2031109
                       Number of splices: AT/AC |	223409
               Number of splices: Non-canonical |	1550124
                      Mismatch rate per base, % |	0.24%
                         Deletion rate per base |	0.03%
                        Deletion average length |	2.11
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.77
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	7160810
             % of reads mapped to multiple loci |	2.42%
        Number of reads mapped to too many loci |	307052
             % of reads mapped to too many loci |	0.10%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	0
       % of reads unmapped: too many mismatches |	0.00%
            Number of reads unmapped: too short |	2027763
                 % of reads unmapped: too short |	0.68%
                Number of reads unmapped: other |	286274
                     % of reads unmapped: other |	0.10%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%