AIH curated blacklist: matched 9 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 181
Pass (FILTER=PASS): 11 (6.1%)
Fail (FILTER=FAIL): 170 (93.9%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 9
All 9 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 64
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 15
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 14
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 13
confidence_below_min(low<high): 12
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 12
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 9
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 9
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 4
confidence_below_min(medium<high);aih_curated_blacklist: 4
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 4
confidence_below_min(low<high);total_reads_below_min(3.0<8.0);aih_curated_blacklist: 2
total_reads_below_min(7.0<8.0): 1
total_reads_below_min(3.0<8.0): 1
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0);aih_curated_blacklist: 1
Breakdown by confidence:
high: 11 pass, 2 fail (total: 13)
low: 0 pass, 62 fail (total: 62)
medium: 0 pass, 106 fail (total: 106)
Arriba filter: 181 rows -> 11 PASS; wrote tih_rna_sample_00467_B23WHTKLT4_2.arriba.fusions.filtered.tsv and tih_rna_sample_00467_B23WHTKLT4_2.arriba.fusions.filtered_pass_only.tsv
Summary written to: tih_rna_sample_00467_B23WHTKLT4_2.arriba.fusions.filter_summary.txt