File Info

Filename
fi_workdir/Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c2/559fc9f0468fc72a2f676af4ca8933/fi_workdir/Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 08 10:12:27
                             Started mapping on |	Jun 08 10:18:48
                                    Finished on |	Jun 08 11:15:28
       Mapping speed, Million of reads per hour |	310.11

                          Number of input reads |	292881117
                      Average input read length |	260
                                    UNIQUE READS:
                   Uniquely mapped reads number |	280525787
                        Uniquely mapped reads % |	95.78%
                          Average mapped length |	259.79
                       Number of splices: Total |	310259335
            Number of splices: Annotated (sjdb) |	303904746
                       Number of splices: GT/AG |	306548615
                       Number of splices: GC/AG |	1970410
                       Number of splices: AT/AC |	186886
               Number of splices: Non-canonical |	1553424
                      Mismatch rate per base, % |	0.19%
                         Deletion rate per base |	0.02%
                        Deletion average length |	2.24
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.91
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	8609265
             % of reads mapped to multiple loci |	2.94%
        Number of reads mapped to too many loci |	771772
             % of reads mapped to too many loci |	0.26%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	0
       % of reads unmapped: too many mismatches |	0.00%
            Number of reads unmapped: too short |	2511142
                 % of reads unmapped: too short |	0.86%
                Number of reads unmapped: other |	463151
                     % of reads unmapped: other |	0.16%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%