Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b7/1534f5bab2e97a7fef2ca7755ce5cd/tih_rna_sample_00166_B23WHTKLT4_2.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/27/e37f010ed7b8c98418319abded27cc/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/27/e37f010ed7b8c98418319abded27cc/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory