AIH curated blacklist: matched 11 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 210
Pass (FILTER=PASS): 30 (14.3%)
Fail (FILTER=FAIL): 180 (85.7%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 11
All 11 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 74
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 14
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 14
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 14
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 13
confidence_below_min(low<high): 11
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 8
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 8
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 5
confidence_below_min(low<high);aih_curated_blacklist: 3
confidence_below_min(medium<high);aih_curated_blacklist: 3
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 2
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 2
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 2
total_reads_below_min(6.0<8.0);aih_curated_blacklist: 1
Breakdown by confidence:
high: 30 pass, 3 fail (total: 33)
low: 0 pass, 90 fail (total: 90)
medium: 0 pass, 87 fail (total: 87)
Arriba filter: 210 rows -> 30 PASS; wrote tih_rna_sample_00434_B23WHTKLT4_2.arriba.fusions.filtered.tsv and tih_rna_sample_00434_B23WHTKLT4_2.arriba.fusions.filtered_pass_only.tsv
Summary written to: tih_rna_sample_00434_B23WHTKLT4_2.arriba.fusions.filter_summary.txt