File Info

Filename
.command.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4a/dc3408f3268ffc1d86ffc00d76be19/.command.out
Size
1.2 KB
Attempt
  AIH curated blacklist: matched 0 fusion rows (breakpoint_ID in qualified set)

================================================================================
ARRIBA FILTERING SUMMARY
================================================================================

Total fusions: 19
  Pass (FILTER=PASS): 8 (42.1%)
  Fail (FILTER=FAIL): 11 (57.9%)

Failure reasons (top 15):
  confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 4
  confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 2
  total_reads_below_min(3.0<8.0): 1
  confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 1
  confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 1
  confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 1
  confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 1

Breakdown by confidence:
  high: 8 pass, 1 fail (total: 9)
  low: 0 pass, 6 fail (total: 6)
  medium: 0 pass, 4 fail (total: 4)
Arriba filter: 19 rows -> 8 PASS; wrote 659_bCu-T1-TRNA-1_B23WHTKLT4_1.arriba.fusions.filtered.tsv and 659_bCu-T1-TRNA-1_B23WHTKLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: 659_bCu-T1-TRNA-1_B23WHTKLT4_1.arriba.fusions.filter_summary.txt