Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/34/007ba06bbd404caac7340240fb313c/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/da/5913336b52ad035c7da56b0c83119e/659_bNS-T1-TRNA-1_B23WHTKLT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/34/007ba06bbd404caac7340240fb313c/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory