.command.err - Workdir - NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (659_cfy-T1-TRNA-1_B23WHTKLT4_1)

File Info

Filename: .command.err
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ef/b353133e9968c4fb647f7d5e20aacd/.command.err
Size: 545 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (659_cfy-T1-TRNA-1_B23WHTKLT4_1)
Attempt

Content

Processing Kallisto file: 659_cfy-T1-TRNA-1_B23WHTKLT4_1/abundance.h5
Successfully converted 659_cfy-T1-TRNA-1_B23WHTKLT4_1/abundance.h5 to 659_cfy-T1-TRNA-1_B23WHTKLT4_1_kallisto_mqc.tsv
  Sample: 659_cfy-T1-TRNA-1_B23WHTKLT4_1
  Mean Fragment Length: 152.5 bp
  Median Fragment Length: 139.0 bp
  pct_mito_est_counts: 0.011%
  pct_ribo_est_counts: 1.014%
  pct_hk_est_counts: 0.647%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.021%
  pct_ribo_tpm: 3.08%
  pct_hk_tpm: 0.939%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 0.008%