AIH curated blacklist: matched 9 fusion rows (breakpoint_ID in qualified set)
================================================================================
ARRIBA FILTERING SUMMARY
================================================================================
Total fusions: 285
Pass (FILTER=PASS): 28 (9.8%)
Fail (FILTER=FAIL): 257 (90.2%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 9
All 9 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 54
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 38
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 31
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 22
confidence_below_min(low<high): 20
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 16
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 13
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 12
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 11
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 7
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 4
confidence_below_min(medium<high);aih_curated_blacklist: 4
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 4
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 4
Breakdown by confidence:
high: 28 pass, 6 fail (total: 34)
low: 0 pass, 157 fail (total: 157)
medium: 0 pass, 94 fail (total: 94)
Arriba filter: 285 rows -> 28 PASS; wrote tih_rna_sample_00087_B23WHTKLT4_1.arriba.fusions.filtered.tsv and tih_rna_sample_00087_B23WHTKLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: tih_rna_sample_00087_B23WHTKLT4_1.arriba.fusions.filter_summary.txt