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- 659_ciJ-T1-TRNA-1_B23WHTKLT4_1.fusions.csv
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- s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ec/153cd543bc0f4a0d56998e89f18ae3/659_ciJ-T1-TRNA-1_B23WHTKLT4_1.fusions.csv
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- 3.2 KB
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Content
View in new tab| Fusion | Databases | Score | Explained score | arriba | starfusion |
| CCDC6--RET | COSMIC,Mitelman,FusionGDB2 | 0.625 | 0.5 * (0.125 + 0.125) + 0.5 * (0.500 + 0.500 + 0.000) | position: chr10:59906122#chr10:43116584,reading-frame: in-frame,type: inversion,split_reads1: 120,split_reads2: 102,discordant_mates: 8,coverage1: 12008,coverage2: 3027,confidence: high | position: chr10:59906122:-#chr10:43116584:+,junction_reads: 254,spanning_reads: 10,ffmp: 0.925 |
| RAI1--MYO15A | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr17:17803849:+#chr17:18124483:+,junction_reads: 38,spanning_reads: 3,ffmp: 0.1391 | ||
| TLK2--AC240565.1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr17:62560126:+#chr17:106864:-,junction_reads: 18,spanning_reads: 0,ffmp: 0.0299 | ||
| TLK2P1--AC110079.1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr17:34039043:-#chr4:118595912:+,junction_reads: 11,spanning_reads: 0,ffmp: 0.034 | ||
| EIF2S3--KLHL15 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chrX:24055678#chrX:24006307,reading-frame: out-of-frame,type: duplication/5'-5',split_reads1: 65,split_reads2: 21,discordant_mates: 0,coverage1: 4878,coverage2: 680,confidence: high | ||
| STX16--NPEPL1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr20:58673711#chr20:58691724,reading-frame: out-of-frame,type: deletion/read-through,split_reads1: 38,split_reads2: 27,discordant_mates: 2,coverage1: 2581,coverage2: 474,confidence: high | ||
| EIF3H--SLC30A8 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr8:116726016#chr8:117015482,reading-frame: out-of-frame,type: duplication/5'-5',split_reads1: 27,split_reads2: 14,discordant_mates: 1,coverage1: 3138,coverage2: 20,confidence: high | ||
| STOM--AL359644.1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr9:121348015#chr9:121403769,reading-frame: out-of-frame,type: duplication/5'-5',split_reads1: 31,split_reads2: 7,discordant_mates: 0,coverage1: 7319,coverage2: 8,confidence: high | ||
| TVP23C--CDRT4 | FusionGDB2 | 0.062 | 0.5 * (0.125) + 0.5 * (0.000) | position: chr17:15503098#chr17:15440285,reading-frame: out-of-frame,type: deletion/read-through,split_reads1: 24,split_reads2: 9,discordant_mates: 0,coverage1: 950,coverage2: 317,confidence: high | |
| MIPEP--CYCSP33 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr13:23805950#chr13:24402028,reading-frame: out-of-frame,type: duplication,split_reads1: 21,split_reads2: 9,discordant_mates: 0,coverage1: 539,coverage2: 21,confidence: high | ||
| MIPEP--TPTE2P6 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr13:23805950#chr13:24402028,reading-frame: out-of-frame,type: duplication,split_reads1: 21,split_reads2: 9,discordant_mates: 0,coverage1: 539,coverage2: 21,confidence: high | ||
| VPS8--AC099560.1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr3:184855818#chr3:40828048,reading-frame: out-of-frame,type: duplication,split_reads1: 16,split_reads2: 1,discordant_mates: 1,coverage1: 947,coverage2: 4,confidence: high | ||
| DNAJC1--SPAG6 | FusionGDB2 | 0.062 | 0.5 * (0.125) + 0.5 * (0.000) | position: chr10:21882282#chr10:22371605,reading-frame: out-of-frame,type: duplication/5'-5',split_reads1: 13,split_reads2: 1,discordant_mates: 0,coverage1: 659,coverage2: 2,confidence: high | |
| DNAJC1--AL513128.1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr10:21882282#chr10:22371605,reading-frame: out-of-frame,type: duplication/5'-5',split_reads1: 13,split_reads2: 1,discordant_mates: 0,coverage1: 659,coverage2: 2,confidence: high |
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