Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4f/0cbc1c8b98eac4944fabe5a6e00ffa/tih_rna_sample_00457_B23WHTKLT4_2.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9f/c036de1d295744ca7fab73f2dc5f92/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9f/c036de1d295744ca7fab73f2dc5f92/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory