Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/70/d24ff6626699d15295e922fa65d375/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/70/d24ff6626699d15295e922fa65d375/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d7/1774f10e0db4842dc6a194816869b6/659_cIX-T1-TRNA-1_B23WHTKLT4_1_R1.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d7/1774f10e0db4842dc6a194816869b6/659_cIX-T1-TRNA-1_B23WHTKLT4_1_R2.fastq.gz
==> STAGING COMPLETE (4 inputs)

ls: *.fail.fastq.gz: No such file or directory
ls: *.merged.fastq.gz: No such file or directory