AIH curated blacklist: matched 8 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 188
Pass (FILTER=PASS): 20 (10.6%)
Fail (FILTER=FAIL): 168 (89.4%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 8
All 8 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 34
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 20
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 17
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 16
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 15
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 15
confidence_below_min(low<high): 10
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 9
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 7
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 4
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 2
total_reads_below_min(6.0<8.0): 2
total_reads_below_min(5.0<8.0): 2
confidence_below_min(medium<high);aih_curated_blacklist: 2
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 2
Breakdown by confidence:
high: 20 pass, 9 fail (total: 29)
low: 0 pass, 78 fail (total: 78)
medium: 0 pass, 81 fail (total: 81)
Arriba filter: 188 rows -> 20 PASS; wrote tih_rna_sample_00089_B23WHTKLT4_1.arriba.fusions.filtered.tsv and tih_rna_sample_00089_B23WHTKLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: tih_rna_sample_00089_B23WHTKLT4_1.arriba.fusions.filter_summary.txt