.command.log - Workdir - NFCORE_RNAFUSION:RNAFUSION:RNA_CONTAMINATION_DETECTION_WORKFLOW:EXTRACT_VAF_FEATURES (tih_rna_sample_00149_B23WHTKLT4_2)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/02/ed823eb91b3c22a9cdf7cb236815ee/.command.log
Size: 576 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:RNA_CONTAMINATION_DETECTION_WORKFLOW:EXTRACT_VAF_FEATURES (tih_rna_sample_00149_B23WHTKLT4_2)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/02/ed823eb91b3c22a9cdf7cb236815ee/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/58/dd3d9f695ff7bb43f477578b598529/tih_rna_sample_00149_B23WHTKLT4_2.vcf
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/02/ed823eb91b3c22a9cdf7cb236815ee/.command.run
==> STAGING COMPLETE (3 inputs)

Processing 1 VCF file(s)...
  tih_rna_sample_00149_B23WHTKLT4_2: n_snps=13191, vaf_p90=1.000000

Output saved to: tih_rna_sample_00149_B23WHTKLT4_2.features.csv
Processed 1 sample(s)