AIH curated blacklist: matched 4 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 76
Pass (FILTER=PASS): 2 (2.6%)
Fail (FILTER=FAIL): 74 (97.4%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 4
All 4 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 14
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 11
confidence_below_min(medium<high): 8
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 8
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 6
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 5
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 4
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 4
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 2
confidence_below_min(medium<high);aih_curated_blacklist: 2
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 2
confidence_below_min(low<high): 2
total_reads_below_min(7.0<8.0);aih_curated_blacklist: 1
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 1
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 1
Breakdown by confidence:
high: 2 pass, 1 fail (total: 3)
low: 0 pass, 31 fail (total: 31)
medium: 0 pass, 42 fail (total: 42)
Arriba filter: 76 rows -> 2 PASS; wrote tih_rna_sample_00158_B23WHTKLT4_1.arriba.fusions.filtered.tsv and tih_rna_sample_00158_B23WHTKLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: tih_rna_sample_00158_B23WHTKLT4_1.arriba.fusions.filter_summary.txt