Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/10/fddf9e4a5c6846f224daf70c6e0b04/tih_rna_sample_00163_B23WHTKLT4_1.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/71/ddb925e3bbedc70f29a74678d788d6/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/71/ddb925e3bbedc70f29a74678d788d6/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory