Started job on | Jun 08 10:01:59
Started mapping on | Jun 08 10:08:34
Finished on | Jun 08 11:37:25
Mapping speed, Million of reads per hour | 199.82
Number of input reads | 295903958
Average input read length | 271
UNIQUE READS:
Uniquely mapped reads number | 286665389
Uniquely mapped reads % | 96.88%
Average mapped length | 270.56
Number of splices: Total | 349576525
Number of splices: Annotated (sjdb) | 344306862
Number of splices: GT/AG | 345261355
Number of splices: GC/AG | 2294319
Number of splices: AT/AC | 239207
Number of splices: Non-canonical | 1781644
Mismatch rate per base, % | 0.18%
Deletion rate per base | 0.02%
Deletion average length | 2.22
Insertion rate per base | 0.00%
Insertion average length | 1.74
MULTI-MAPPING READS:
Number of reads mapped to multiple loci | 6317380
% of reads mapped to multiple loci | 2.13%
Number of reads mapped to too many loci | 454903
% of reads mapped to too many loci | 0.15%
UNMAPPED READS:
Number of reads unmapped: too many mismatches | 0
% of reads unmapped: too many mismatches | 0.00%
Number of reads unmapped: too short | 2217309
% of reads unmapped: too short | 0.75%
Number of reads unmapped: other | 248977
% of reads unmapped: other | 0.08%
CHIMERIC READS:
Number of chimeric reads | 0
% of chimeric reads | 0.00%