File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/49/1f092c2e8e54e87998e337cb2b7ac4/.command.log
Size
717 bytes
Attempt
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7a/e645bee07f0f875b32d9f12147cd7b/659_cAd-T1-TRNA-1_B23WHTKLT4_1.features.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/49/1f092c2e8e54e87998e337cb2b7ac4/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/49/1f092c2e8e54e87998e337cb2b7ac4/.command.run
==> STAGING COMPLETE (3 inputs)

Predicting contamination for 1 sample(s)...
Detection threshold: VAF_p90 < 0.9999
Level estimation: contamination_pct = -215.87 * vaf_p90 + 215.65

  659_cAd-T1-TRNA-1_B23WHTKLT4_1: vaf_p90=1.000000 -> CLEAN

Output saved to: 659_cAd-T1-TRNA-1_B23WHTKLT4_1.predictions.csv
Summary: 0/1 samples flagged as contaminated