Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f8/91ecee9819a42919d8f5d545c447a5/659_buD-T1-TRNA-1_B23WHTKLT4_1.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5e/2fa8863b4848e0b755d04cf5c6ff24/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5e/2fa8863b4848e0b755d04cf5c6ff24/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory