.command.log - Workdir - NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (659_epP-T1-TRNA-1_B23WHTKLT4_1)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/02/8b68a1d089fb02871ba17a96023c72/.command.log
Size: 704 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (659_epP-T1-TRNA-1_B23WHTKLT4_1)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f0/99250f97771a616ea234ad2e0ad53a/659_epP-T1-TRNA-1_B23WHTKLT4_1.md.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/02/8b68a1d089fb02871ba17a96023c72/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/02/8b68a1d089fb02871ba17a96023c72/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f0/99250f97771a616ea234ad2e0ad53a/659_epP-T1-TRNA-1_B23WHTKLT4_1.md.bai
==> STAGING COMPLETE (4 inputs)

+ seqtool saturation -region chr20 659_epP-T1-TRNA-1_B23WHTKLT4_1.md.bam
[W::hts_idx_load3] The index file is older than the data file: 659_epP-T1-TRNA-1_B23WHTKLT4_1.md.bai