Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fe/3debe71416f0e42e0138d0d7abadef/tih_rna_sample_00089_B23WHTKLT4_1_2.fastp.fastq.gz
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/27/672d6dc86f023ca0d980411f481d1d/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/27/672d6dc86f023ca0d980411f481d1d/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fe/3debe71416f0e42e0138d0d7abadef/tih_rna_sample_00089_B23WHTKLT4_1_1.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f2/40f9967b343aa3bf76f99db2fe3657/tih_rna_sample_00089_B23WHTKLT4_1.Chimeric.out.junction
==> STAGING COMPLETE (6 inputs)

-ctat genome lib [/tmp/nxf.NflU6CvWC2/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.NflU6CvWC2/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.NflU6CvWC2/./star-fusion.preliminary
-sample contains 184812266 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.NflU6CvWC2/ctat_genome_lib_build_dir  -J /tmp/nxf.NflU6CvWC2/tih_rna_sample_00089_B23WHTKLT4_1.Chimeric.out.junction  -O /tmp/nxf.NflU6CvWC2/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.NflU6CvWC2/tih_rna_sample_00089_B23WHTKLT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.NflU6CvWC2/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

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[1370000], rate=58588.74/min -building interval tree based on /tmp/nxf.NflU6CvWC2/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

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[1370000], rate=50000.00/min -building interval tree based on /tmp/nxf.NflU6CvWC2/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

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[1370000], rate=36960.43/min -building interval tree based on /tmp/nxf.NflU6CvWC2/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

[10000], rate=75000.00/min 
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[1000000], rate=35252.64/min 
[1010000], rate=35273.57/min 
[1020000], rate=35294.12/min 
[1030000], rate=35374.93/min 
[1040000], rate=35454.55/min 
[1050000], rate=35532.99/min 
[1060000], rate=35630.25/min 
[1070000], rate=35746.10/min 
[1080000], rate=35880.40/min 
[1090000], rate=36033.06/min 
[1100000], rate=36026.20/min 
[1110000], rate=36058.47/min 
[1120000], rate=35955.06/min 
[1130000], rate=35721.81/min 
[1140000], rate=35550.94/min 
[1150000], rate=35366.48/min 
[1160000], rate=35169.28/min 
[1170000], rate=34735.28/min 
[1180000], rate=34435.80/min 
[1190000], rate=34261.04/min 
[1200000], rate=33866.42/min 
[1210000], rate=33767.44/min 
[1220000], rate=33439.93/min 
[1230000], rate=33153.64/min 
[1240000], rate=33184.66/min 
[1250000], rate=32967.03/min 
[1260000], rate=33041.96/min 
[1270000], rate=33058.57/min 
[1280000], rate=33103.45/min 
[1290000], rate=33147.75/min 
[1300000], rate=33262.26/min 
[1310000], rate=33375.80/min 
[1320000], rate=33516.72/min 
[1330000], rate=33656.68/min 
[1340000], rate=33809.92/min 
[1350000], rate=33990.77/min 
[1360000], rate=34127.98/min 
[1370000], rate=34278.57/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.NflU6CvWC2/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.NflU6CvWC2/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.NflU6CvWC2/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.NflU6CvWC2/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.NflU6CvWC2/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 0.00 reads per min processed...  
 12000000.00 reads per min processed...  
 4500000.00 reads per min processed...  
 4000000.00 reads per min processed...  
 3750000.00 reads per min processed...  
 3600000.00 reads per min processed...  
 3500000.00 reads per min processed...  
 3428571.43 reads per min processed...  
 3375000.00 reads per min processed...  
 3333333.33 reads per min processed...  
 3300000.00 reads per min processed...  
 3428571.43 reads per min processed...  
 3391304.35 reads per min processed...  
 3360000.00 reads per min processed...  
 3214285.71 reads per min processed...  
 3200000.00 reads per min processed...  
 3187500.00 reads per min processed...  
 3176470.59 reads per min processed...  
 3166666.67 reads per min processed...  
 3157894.74 reads per min processed...  
 3150000.00 reads per min processed...  
 3142857.14 reads per min processed...  
 3136363.64 reads per min processed...  
 3130434.78 reads per min processed...  
 3125000.00 reads per min processed...  
 3250000.00 reads per min processed...  
 3240000.00 reads per min processed...  
 3294117.65 reads per min processed...  
 3283018.87 reads per min processed...  
 3272727.27 reads per min processed...  
 3263157.89 reads per min processed...  
 3254237.29 reads per min processed...  
 3245901.64 reads per min processed...  
 3238095.24 reads per min processed...  
 3230769.23 reads per min processed...  
 3223880.60 reads per min processed...  
 3217391.30 reads per min processed...  
 3211267.61 reads per min processed...  
 3205479.45 reads per min processed...  
 3200000.00 reads per min processed...  
 3194805.19 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.NflU6CvWC2/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.NflU6CvWC2/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.NflU6CvWC2/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.NflU6CvWC2/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.NflU6CvWC2/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.NflU6CvWC2/tih_rna_sample_00089_B23WHTKLT4_1.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.NflU6CvWC2/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.NflU6CvWC2/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.NflU6CvWC2/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -319854.601347
EM: Round [1] log likelihood: -319677.750018
EM: Round [2] log likelihood: -319612.518052
EM: Round [3] log likelihood: -319581.572782
EM: Round [4] log likelihood: -319565.125907
EM: Round [5] log likelihood: -319555.759807
EM: Round [6] log likelihood: -319550.126836
EM: Round [7] log likelihood: -319546.562134
EM: Round [8] log likelihood: -319544.192627
EM: Round [9] log likelihood: -319542.543767
EM: Round [10] log likelihood: -319541.348798
EM: Round [11] log likelihood: -319540.452171
EM: Round [12] log likelihood: -319539.759575
EM: Round [13] log likelihood: -319539.211529
EM: Round [14] log likelihood: -319538.769083
EM: Round [15] log likelihood: -319538.405835
EM: Round [16] log likelihood: -319538.103328
EM: Round [17] log likelihood: -319537.848310
EM: Round [18] log likelihood: -319537.631042
EM: Round [19] log likelihood: -319537.444216
EM: Round [20] log likelihood: -319537.282255
EM: Round [21] log likelihood: -319537.140834
EM: Round [22] log likelihood: -319537.016549
EM: Round [23] log likelihood: -319536.906690
EM: Round [24] log likelihood: -319536.809075
EM: Round [25] log likelihood: -319536.721925
EM: Round [26] log likelihood: -319536.643780
EM: Round [27] log likelihood: -319536.573427
EM: Round [28] log likelihood: -319536.509854
EM: Round [29] log likelihood: -319536.452208
EM: Round [30] log likelihood: -319536.399768
EM: Round [31] log likelihood: -319536.351917
EM: Round [32] log likelihood: -319536.308129
EM: Round [33] log likelihood: -319536.267947
EM: Round [34] log likelihood: -319536.230979
EM: Round [35] log likelihood: -319536.196884
EM: Round [36] log likelihood: -319536.165364
EM: Round [37] log likelihood: -319536.136157
EM: Round [38] log likelihood: -319536.109035
EM: Round [39] log likelihood: -319536.083796
EM: Round [40] log likelihood: -319536.060262
EM: Round [41] log likelihood: -319536.038275
EM: Round [42] log likelihood: -319536.017696
EM: Round [43] log likelihood: -319535.998399
EM: Round [44] log likelihood: -319535.980274
EM: Round [45] log likelihood: -319535.963221
EM: Round [46] log likelihood: -319535.947151
EM: Round [47] log likelihood: -319535.931984
EM: Round [48] log likelihood: -319535.917647
EM: Round [49] log likelihood: -319535.904077
EM: Round [50] log likelihood: -319535.891214
EM: Round [51] log likelihood: -319535.879004
EM: Round [52] log likelihood: -319535.867401
EM: Round [53] log likelihood: -319535.856359
EM: Round [54] log likelihood: -319535.845840
EM: Round [55] log likelihood: -319535.835807
EM: Round [56] log likelihood: -319535.826227
EM: Round [57] log likelihood: -319535.817069
EM: Round [58] log likelihood: -319535.808305
EM: Round [59] log likelihood: -319535.799911
EM: Round [60] log likelihood: -319535.791862
EM: Round [61] log likelihood: -319535.784137
EM: Round [62] log likelihood: -319535.776717
EM: Round [63] log likelihood: -319535.769582
EM: Round [64] log likelihood: -319535.762717
EM: Round [65] log likelihood: -319535.756104
EM: Round [66] log likelihood: -319535.749731
EM: Round [67] log likelihood: -319535.743582
EM: Round [68] log likelihood: -319535.737646
EM: Round [69] log likelihood: -319535.731911
EM: Round [70] log likelihood: -319535.726367
EM: Round [71] log likelihood: -319535.721002
EM: Round [72] log likelihood: -319535.715809
EM: Round [73] log likelihood: -319535.710777
EM: Round [74] log likelihood: -319535.705899
EM: Round [75] log likelihood: -319535.701167
EM: Round [76] log likelihood: -319535.696574
EM: Round [77] log likelihood: -319535.692114
EM: Round [78] log likelihood: -319535.687779
EM: Round [79] log likelihood: -319535.683564
EM: Round [80] log likelihood: -319535.679463
EM: Round [81] log likelihood: -319535.675472
EM: Round [82] log likelihood: -319535.671585
EM: Round [83] log likelihood: -319535.667798
EM: Round [84] log likelihood: -319535.664106
EM: Round [85] log likelihood: -319535.660505
EM: Round [86] log likelihood: -319535.656992
EM: Round [87] log likelihood: -319535.653562
EM: Round [88] log likelihood: -319535.650213
EM: Round [89] log likelihood: -319535.646941
EM: Round [90] log likelihood: -319535.643743
EM: Round [91] log likelihood: -319535.640616
EM: Round [92] log likelihood: -319535.637557
EM: Round [93] log likelihood: -319535.634564
EM: Round [94] log likelihood: -319535.631635
EM: Round [95] log likelihood: -319535.628766
EM: Round [96] log likelihood: -319535.625956
EM: Round [97] log likelihood: -319535.623203
EM: Round [98] log likelihood: -319535.620504
EM: Round [99] log likelihood: -319535.617859
EM: Round [100] log likelihood: -319535.615264
EM: Round [101] log likelihood: -319535.612718
EM: Round [102] log likelihood: -319535.610221
EM: Round [103] log likelihood: -319535.607769
EM: Round [104] log likelihood: -319535.605362
EM: Round [105] log likelihood: -319535.602998
EM: Round [106] log likelihood: -319535.600677
EM: Round [107] log likelihood: -319535.598396
EM: Round [108] log likelihood: -319535.596154
EM: Round [109] log likelihood: -319535.593951
EM: Round [110] log likelihood: -319535.591784
EM: Round [111] log likelihood: -319535.589654
EM: Round [112] log likelihood: -319535.587559
EM: Round [113] log likelihood: -319535.585499
EM: Round [114] log likelihood: -319535.583471
EM: Round [115] log likelihood: -319535.581476
EM: Round [116] log likelihood: -319535.579512
EM: Round [117] log likelihood: -319535.577579
EM: Round [118] log likelihood: -319535.575676
EM: Round [119] log likelihood: -319535.573802
EM: Round [120] log likelihood: -319535.571957
EM: Round [121] log likelihood: -319535.570139
EM: Round [122] log likelihood: -319535.568349
EM: Round [123] log likelihood: -319535.566585
EM: Round [124] log likelihood: -319535.564847
EM: Round [125] log likelihood: -319535.563134
EM: Round [126] log likelihood: -319535.561446
EM: Round [127] log likelihood: -319535.559782
EM: Round [128] log likelihood: -319535.558142
EM: Round [129] log likelihood: -319535.556524
EM: Round [130] log likelihood: -319535.554930
EM: Round [131] log likelihood: -319535.553358
EM: Round [132] log likelihood: -319535.551807
EM: Round [133] log likelihood: -319535.550278
EM: Round [134] log likelihood: -319535.548769
EM: Round [135] log likelihood: -319535.547282
EM: Round [136] log likelihood: -319535.545814
EM: Round [137] log likelihood: -319535.544366
EM: Round [138] log likelihood: -319535.542937
EM: Round [139] log likelihood: -319535.541527
EM: Round [140] log likelihood: -319535.540136
EM: Round [141] log likelihood: -319535.538763
EM: Round [142] log likelihood: -319535.537408
EM: Round [143] log likelihood: -319535.536070
EM: Round [144] log likelihood: -319535.534750
EM: Round [145] log likelihood: -319535.533447
EM: Round [146] log likelihood: -319535.532161
EM: Round [147] log likelihood: -319535.530891
EM: Round [148] log likelihood: -319535.529637
EM: Round [149] log likelihood: -319535.528399
EM: Round [150] log likelihood: -319535.527177
EM: Round [151] log likelihood: -319535.525970
EM: Round [152] log likelihood: -319535.524778
EM: Round [153] log likelihood: -319535.523601
EM: Round [154] log likelihood: -319535.522439
EM: Round [155] log likelihood: -319535.521291
EM: Round [156] log likelihood: -319535.520158
EM: Round [157] log likelihood: -319535.519038
EM: Round [158] log likelihood: -319535.517932
EM: Round [159] log likelihood: -319535.516840
EM: Round [160] log likelihood: -319535.515761
EM: Round [161] log likelihood: -319535.514696
EM: Round [162] log likelihood: -319535.513643
EM: Round [163] log likelihood: -319535.512603
EM: Round [164] log likelihood: -319535.511575
EM: Round [165] log likelihood: -319535.510560
EM: Round [166] log likelihood: -319535.509557
EM: Round [167] log likelihood: -319535.508566
EM: Round [168] log likelihood: -319535.507587
EM: Round [169] log likelihood: -319535.506620
EM: Round [170] log likelihood: -319535.505665
EM: Round [171] log likelihood: -319535.504720
EM: Round [172] log likelihood: -319535.503787
EM: Round [173] log likelihood: -319535.502865
EM: Round [174] log likelihood: -319535.501954
EM: Round [175] log likelihood: -319535.501054
EM: Round [176] log likelihood: -319535.500164
EM: Round [177] log likelihood: -319535.499285
EM: Round [178] log likelihood: -319535.498416
EM: Round [179] log likelihood: -319535.497557
EM: Round [180] log likelihood: -319535.496708
EM: Round [181] log likelihood: -319535.495870
EM: Round [182] log likelihood: -319535.495041
EM: Round [183] log likelihood: -319535.494221
EM: Round [184] log likelihood: -319535.493412
EM: Round [185] log likelihood: -319535.492611
EM: Round [186] log likelihood: -319535.491820
EM: Round [187] log likelihood: -319535.491038
EM: Round [188] log likelihood: -319535.490265
EM: Round [189] log likelihood: -319535.489502
EM: Round [190] log likelihood: -319535.488747
EM: Round [191] log likelihood: -319535.488000
EM: Round [192] log likelihood: -319535.487262
EM: Round [193] log likelihood: -319535.486533
EM: Round [194] log likelihood: -319535.485812
EM: Round [195] log likelihood: -319535.485100
EM: Round [196] log likelihood: -319535.484395
EM: Round [197] log likelihood: -319535.483699
EM: Round [198] log likelihood: -319535.483010
EM: Round [199] log likelihood: -319535.482330
EM: Round [200] log likelihood: -319535.481657
EM: Round [201] log likelihood: -319535.480992
EM: Round [202] log likelihood: -319535.480334
EM: Round [203] log likelihood: -319535.479684
EM: Round [204] log likelihood: -319535.479042
EM: Round [205] log likelihood: -319535.478406
EM: Round [206] log likelihood: -319535.477778
EM: Round [207] log likelihood: -319535.477157
EM: Round [208] log likelihood: -319535.476543
EM: Round [209] log likelihood: -319535.475936
EM: Round [210] log likelihood: -319535.475336
EM: Round [211] log likelihood: -319535.474743
EM: Round [212] log likelihood: -319535.474156
EM: Round [213] log likelihood: -319535.473576
EM: Round [214] log likelihood: -319535.473003
EM: Round [215] log likelihood: -319535.472436
EM: Round [216] log likelihood: -319535.471875
EM: Round [217] log likelihood: -319535.471321
EM: Round [218] log likelihood: -319535.470773
EM: Round [219] log likelihood: -319535.470231
EM: Round [220] log likelihood: -319535.469695
EM: Round [221] log likelihood: -319535.469165
EM: Round [222] log likelihood: -319535.468641
EM: Round [223] log likelihood: -319535.468123
EM: Round [224] log likelihood: -319535.467611
EM: Round [225] log likelihood: -319535.467105
EM: Round [226] log likelihood: -319535.466604
EM: Round [227] log likelihood: -319535.466109
EM: Round [228] log likelihood: -319535.465619
EM: Round [229] log likelihood: -319535.465135
EM: Round [230] log likelihood: -319535.464656
EM: Round [231] log likelihood: -319535.464183
EM: Round [232] log likelihood: -319535.463714
EM: Round [233] log likelihood: -319535.463251
EM: Round [234] log likelihood: -319535.462794
EM: Round [235] log likelihood: -319535.462341
EM: Round [236] log likelihood: -319535.461893
EM: Round [237] log likelihood: -319535.461451
EM: Round [238] log likelihood: -319535.461013
EM: Round [239] log likelihood: -319535.460580
EM: Round [240] log likelihood: -319535.460152
EM: Round [241] log likelihood: -319535.459728
EM: Round [242] log likelihood: -319535.459310
EM: Round [243] log likelihood: -319535.458896
EM: Round [244] log likelihood: -319535.458486
EM: Round [245] log likelihood: -319535.458081
EM: Round [246] log likelihood: -319535.457681
EM: Round [247] log likelihood: -319535.457285
EM: Round [248] log likelihood: -319535.456893
EM: Round [249] log likelihood: -319535.456506
EM: Round [250] log likelihood: -319535.456123
EM: Round [251] log likelihood: -319535.455744
EM: Round [252] log likelihood: -319535.455370
EM: Round [253] log likelihood: -319535.454999
EM: Round [254] log likelihood: -319535.454633
EM: Round [255] log likelihood: -319535.454270
EM: Round [256] log likelihood: -319535.453912
EM: Round [257] log likelihood: -319535.453558
EM: Round [258] log likelihood: -319535.453207
EM: Round [259] log likelihood: -319535.452861
EM: Round [260] log likelihood: -319535.452518
EM: Round [261] log likelihood: -319535.452179
EM: Round [262] log likelihood: -319535.451843
EM: Round [263] log likelihood: -319535.451512
EM: Round [264] log likelihood: -319535.451184
EM: Round [265] log likelihood: -319535.450859
EM: Round [266] log likelihood: -319535.450539
EM: Round [267] log likelihood: -319535.450221
EM: Round [268] log likelihood: -319535.449907
EM: Round [269] log likelihood: -319535.449597
EM: Round [270] log likelihood: -319535.449290
EM: Round [271] log likelihood: -319535.448986
EM: Round [272] log likelihood: -319535.448686
EM: Round [273] log likelihood: -319535.448389
EM: Round [274] log likelihood: -319535.448095
EM: Round [275] log likelihood: -319535.447805
EM: Round [276] log likelihood: -319535.447518
EM: Round [277] log likelihood: -319535.447233
EM: Round [278] log likelihood: -319535.446952
EM: Round [279] log likelihood: -319535.446674
EM: Round [280] log likelihood: -319535.446399
EM: Round [281] log likelihood: -319535.446127
EM: Round [282] log likelihood: -319535.445858
EM: Round [283] log likelihood: -319535.445592
EM: Round [284] log likelihood: -319535.445329
EM: Round [285] log likelihood: -319535.445069
EM: Round [286] log likelihood: -319535.444811
EM: Round [287] log likelihood: -319535.444557
EM: Round [288] log likelihood: -319535.444305
EM: Round [289] log likelihood: -319535.444056
EM: Round [290] log likelihood: -319535.443809
EM: Round [291] log likelihood: -319535.443566
EM: Round [292] log likelihood: -319535.443325
EM: Round [293] log likelihood: -319535.443086
EM: Round [294] log likelihood: -319535.442850
EM: Round [295] log likelihood: -319535.442617
EM: Round [296] log likelihood: -319535.442386
EM: Round [297] log likelihood: -319535.442158
EM: Round [298] log likelihood: -319535.441932
EM: Round [299] log likelihood: -319535.441709
EM: Round [300] log likelihood: -319535.441488
EM: Round [301] log likelihood: -319535.441270
EM: Round [302] log likelihood: -319535.441054
EM: Round [303] log likelihood: -319535.440840
EM: Round [304] log likelihood: -319535.440629
EM: Round [305] log likelihood: -319535.440420
EM: Round [306] log likelihood: -319535.440213
EM: Round [307] log likelihood: -319535.440008
EM: Round [308] log likelihood: -319535.439806
EM: Round [309] log likelihood: -319535.439606
EM: Round [310] log likelihood: -319535.439408
EM: Round [311] log likelihood: -319535.439212
EM: Round [312] log likelihood: -319535.439018
EM: Round [313] log likelihood: -319535.438826
EM: Round [314] log likelihood: -319535.438637
EM: Round [315] log likelihood: -319535.438449
EM: Round [316] log likelihood: -319535.438264
EM: Round [317] log likelihood: -319535.438080
EM: Round [318] log likelihood: -319535.437899
EM: Round [319] log likelihood: -319535.437719
EM: Round [320] log likelihood: -319535.437542
EM: Round [321] log likelihood: -319535.437366
EM: Round [322] log likelihood: -319535.437193
EM: Round [323] log likelihood: -319535.437021
EM: Round [324] log likelihood: -319535.436851
EM: Round [325] log likelihood: -319535.436683
EM: Round [326] log likelihood: -319535.436516
EM: Round [327] log likelihood: -319535.436352
EM: Round [328] log likelihood: -319535.436189
EM: Round [329] log likelihood: -319535.436028
EM: Round [330] log likelihood: -319535.435869
EM: Round [331] log likelihood: -319535.435711
EM: Round [332] log likelihood: -319535.435555
EM: Round [333] log likelihood: -319535.435401
EM: Round [334] log likelihood: -319535.435249
EM: Round [335] log likelihood: -319535.435098
EM: Round [336] log likelihood: -319535.434949
EM: Round [337] log likelihood: -319535.434801
EM: Round [338] log likelihood: -319535.434655
EM: Round [339] log likelihood: -319535.434511
EM: Round [340] log likelihood: -319535.434368
EM: Round [341] log likelihood: -319535.434226
EM: Round [342] log likelihood: -319535.434087
EM: Round [343] log likelihood: -319535.433948
EM: Round [344] log likelihood: -319535.433811
EM: Round [345] log likelihood: -319535.433676
EM: Round [346] log likelihood: -319535.433542
EM: Round [347] log likelihood: -319535.433410
EM: Round [348] log likelihood: -319535.433279
EM: Round [349] log likelihood: -319535.433149
EM: Round [350] log likelihood: -319535.433021
EM: Round [351] log likelihood: -319535.432894
EM: Round [352] log likelihood: -319535.432769
EM: Round [353] log likelihood: -319535.432645
EM: Round [354] log likelihood: -319535.432522
EM: Round [355] log likelihood: -319535.432401
EM: Round [356] log likelihood: -319535.432281
EM: Round [357] log likelihood: -319535.432162
EM: Round [358] log likelihood: -319535.432044
EM: Round [359] log likelihood: -319535.431928
EM: Round [360] log likelihood: -319535.431813
EM: Round [361] log likelihood: -319535.431699
EM: Round [362] log likelihood: -319535.431586
EM: Round [363] log likelihood: -319535.431475
EM: Round [364] log likelihood: -319535.431365
EM: Round [365] log likelihood: -319535.431256
EM: Round [366] log likelihood: -319535.431148
EM: Round [367] log likelihood: -319535.431042
EM: Round [368] log likelihood: -319535.430936
EM: Round [369] log likelihood: -319535.430832
EM: Round [370] log likelihood: -319535.430729
EM: Round [371] log likelihood: -319535.430626
EM: Round [372] log likelihood: -319535.430525
EM: Round [373] log likelihood: -319535.430425
EM: Stopping iterations at round 373 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -319218.881100
EM: Round [1] log likelihood: -319071.131370
EM: Round [2] log likelihood: -319016.382884
EM: Round [3] log likelihood: -318990.856648
EM: Round [4] log likelihood: -318977.493955
EM: Round [5] log likelihood: -318969.987739
EM: Round [6] log likelihood: -318965.520779
EM: Round [7] log likelihood: -318962.712962
EM: Round [8] log likelihood: -318960.854441
EM: Round [9] log likelihood: -318959.565818
EM: Round [10] log likelihood: -318958.636073
EM: Round [11] log likelihood: -318957.942727
EM: Round [12] log likelihood: -318957.411519
EM: Round [13] log likelihood: -318956.995470
EM: Round [14] log likelihood: -318956.663664
EM: Round [15] log likelihood: -318956.395018
EM: Round [16] log likelihood: -318956.174708
EM: Round [17] log likelihood: -318955.992034
EM: Round [18] log likelihood: -318955.839096
EM: Round [19] log likelihood: -318955.709951
EM: Round [20] log likelihood: -318955.600057
EM: Round [21] log likelihood: -318955.505891
EM: Round [22] log likelihood: -318955.424687
EM: Round [23] log likelihood: -318955.354248
EM: Round [24] log likelihood: -318955.292815
EM: Round [25] log likelihood: -318955.238962
EM: Round [26] log likelihood: -318955.191527
EM: Round [27] log likelihood: -318955.149554
EM: Round [28] log likelihood: -318955.112251
EM: Round [29] log likelihood: -318955.078960
EM: Round [30] log likelihood: -318955.049127
EM: Round [31] log likelihood: -318955.022288
EM: Round [32] log likelihood: -318954.998048
EM: Round [33] log likelihood: -318954.976072
EM: Round [34] log likelihood: -318954.956075
EM: Round [35] log likelihood: -318954.937812
EM: Round [36] log likelihood: -318954.921072
EM: Round [37] log likelihood: -318954.905674
EM: Round [38] log likelihood: -318954.891463
EM: Round [39] log likelihood: -318954.878300
EM: Round [40] log likelihood: -318954.866070
EM: Round [41] log likelihood: -318954.854669
EM: Round [42] log likelihood: -318954.844007
EM: Round [43] log likelihood: -318954.834007
EM: Round [44] log likelihood: -318954.824600
EM: Round [45] log likelihood: -318954.815725
EM: Round [46] log likelihood: -318954.807329
EM: Round [47] log likelihood: -318954.799367
EM: Round [48] log likelihood: -318954.791797
EM: Round [49] log likelihood: -318954.784582
EM: Round [50] log likelihood: -318954.777691
EM: Round [51] log likelihood: -318954.771095
EM: Round [52] log likelihood: -318954.764769
EM: Round [53] log likelihood: -318954.758691
EM: Round [54] log likelihood: -318954.752839
EM: Round [55] log likelihood: -318954.747197
EM: Round [56] log likelihood: -318954.741749
EM: Round [57] log likelihood: -318954.736479
EM: Round [58] log likelihood: -318954.731376
EM: Round [59] log likelihood: -318954.726428
EM: Round [60] log likelihood: -318954.721624
EM: Round [61] log likelihood: -318954.716954
EM: Round [62] log likelihood: -318954.712412
EM: Round [63] log likelihood: -318954.707988
EM: Round [64] log likelihood: -318954.703676
EM: Round [65] log likelihood: -318954.699470
EM: Round [66] log likelihood: -318954.695363
EM: Round [67] log likelihood: -318954.691351
EM: Round [68] log likelihood: -318954.687429
EM: Round [69] log likelihood: -318954.683592
EM: Round [70] log likelihood: -318954.679836
EM: Round [71] log likelihood: -318954.676158
EM: Round [72] log likelihood: -318954.672555
EM: Round [73] log likelihood: -318954.669022
EM: Round [74] log likelihood: -318954.665558
EM: Round [75] log likelihood: -318954.662159
EM: Round [76] log likelihood: -318954.658823
EM: Round [77] log likelihood: -318954.655547
EM: Round [78] log likelihood: -318954.652330
EM: Round [79] log likelihood: -318954.649170
EM: Round [80] log likelihood: -318954.646064
EM: Round [81] log likelihood: -318954.643011
EM: Round [82] log likelihood: -318954.640009
EM: Round [83] log likelihood: -318954.637057
EM: Round [84] log likelihood: -318954.634152
EM: Round [85] log likelihood: -318954.631295
EM: Round [86] log likelihood: -318954.628483
EM: Round [87] log likelihood: -318954.625714
EM: Round [88] log likelihood: -318954.622989
EM: Round [89] log likelihood: -318954.620306
EM: Round [90] log likelihood: -318954.617664
EM: Round [91] log likelihood: -318954.615061
EM: Round [92] log likelihood: -318954.612497
EM: Round [93] log likelihood: -318954.609971
EM: Round [94] log likelihood: -318954.607482
EM: Round [95] log likelihood: -318954.605029
EM: Round [96] log likelihood: -318954.602612
EM: Round [97] log likelihood: -318954.600229
EM: Round [98] log likelihood: -318954.597880
EM: Round [99] log likelihood: -318954.595565
EM: Round [100] log likelihood: -318954.593281
EM: Round [101] log likelihood: -318954.591030
EM: Round [102] log likelihood: -318954.588810
EM: Round [103] log likelihood: -318954.586620
EM: Round [104] log likelihood: -318954.584460
EM: Round [105] log likelihood: -318954.582330
EM: Round [106] log likelihood: -318954.580229
EM: Round [107] log likelihood: -318954.578156
EM: Round [108] log likelihood: -318954.576110
EM: Round [109] log likelihood: -318954.574092
EM: Round [110] log likelihood: -318954.572101
EM: Round [111] log likelihood: -318954.570136
EM: Round [112] log likelihood: -318954.568198
EM: Round [113] log likelihood: -318954.566284
EM: Round [114] log likelihood: -318954.564396
EM: Round [115] log likelihood: -318954.562532
EM: Round [116] log likelihood: -318954.560692
EM: Round [117] log likelihood: -318954.558876
EM: Round [118] log likelihood: -318954.557084
EM: Round [119] log likelihood: -318954.555315
EM: Round [120] log likelihood: -318954.553568
EM: Round [121] log likelihood: -318954.551843
EM: Round [122] log likelihood: -318954.550141
EM: Round [123] log likelihood: -318954.548460
EM: Round [124] log likelihood: -318954.546800
EM: Round [125] log likelihood: -318954.545161
EM: Round [126] log likelihood: -318954.543543
EM: Round [127] log likelihood: -318954.541945
EM: Round [128] log likelihood: -318954.540368
EM: Round [129] log likelihood: -318954.538809
EM: Round [130] log likelihood: -318954.537271
EM: Round [131] log likelihood: -318954.535751
EM: Round [132] log likelihood: -318954.534250
EM: Round [133] log likelihood: -318954.532768
EM: Round [134] log likelihood: -318954.531304
EM: Round [135] log likelihood: -318954.529858
EM: Round [136] log likelihood: -318954.528430
EM: Round [137] log likelihood: -318954.527019
EM: Round [138] log likelihood: -318954.525626
EM: Round [139] log likelihood: -318954.524249
EM: Round [140] log likelihood: -318954.522890
EM: Round [141] log likelihood: -318954.521547
EM: Round [142] log likelihood: -318954.520220
EM: Round [143] log likelihood: -318954.518909
EM: Round [144] log likelihood: -318954.517614
EM: Round [145] log likelihood: -318954.516335
EM: Round [146] log likelihood: -318954.515071
EM: Round [147] log likelihood: -318954.513822
EM: Round [148] log likelihood: -318954.512589
EM: Round [149] log likelihood: -318954.511370
EM: Round [150] log likelihood: -318954.510166
EM: Round [151] log likelihood: -318954.508976
EM: Round [152] log likelihood: -318954.507800
EM: Round [153] log likelihood: -318954.506639
EM: Round [154] log likelihood: -318954.505491
EM: Round [155] log likelihood: -318954.504357
EM: Round [156] log likelihood: -318954.503236
EM: Round [157] log likelihood: -318954.502129
EM: Round [158] log likelihood: -318954.501035
EM: Round [159] log likelihood: -318954.499953
EM: Round [160] log likelihood: -318954.498885
EM: Round [161] log likelihood: -318954.497829
EM: Round [162] log likelihood: -318954.496785
EM: Round [163] log likelihood: -318954.495754
EM: Round [164] log likelihood: -318954.494735
EM: Round [165] log likelihood: -318954.493728
EM: Round [166] log likelihood: -318954.492733
EM: Round [167] log likelihood: -318954.491749
EM: Round [168] log likelihood: -318954.490777
EM: Round [169] log likelihood: -318954.489816
EM: Round [170] log likelihood: -318954.488866
EM: Round [171] log likelihood: -318954.487928
EM: Round [172] log likelihood: -318954.487000
EM: Round [173] log likelihood: -318954.486083
EM: Round [174] log likelihood: -318954.485177
EM: Round [175] log likelihood: -318954.484281
EM: Round [176] log likelihood: -318954.483396
EM: Round [177] log likelihood: -318954.482521
EM: Round [178] log likelihood: -318954.481656
EM: Round [179] log likelihood: -318954.480801
EM: Round [180] log likelihood: -318954.479956
EM: Round [181] log likelihood: -318954.479120
EM: Round [182] log likelihood: -318954.478295
EM: Round [183] log likelihood: -318954.477478
EM: Round [184] log likelihood: -318954.476671
EM: Round [185] log likelihood: -318954.475874
EM: Round [186] log likelihood: -318954.475086
EM: Round [187] log likelihood: -318954.474306
EM: Round [188] log likelihood: -318954.473536
EM: Round [189] log likelihood: -318954.472774
EM: Round [190] log likelihood: -318954.472021
EM: Round [191] log likelihood: -318954.471277
EM: Round [192] log likelihood: -318954.470541
EM: Round [193] log likelihood: -318954.469814
EM: Round [194] log likelihood: -318954.469095
EM: Round [195] log likelihood: -318954.468384
EM: Round [196] log likelihood: -318954.467681
EM: Round [197] log likelihood: -318954.466986
EM: Round [198] log likelihood: -318954.466299
EM: Round [199] log likelihood: -318954.465620
EM: Round [200] log likelihood: -318954.464949
EM: Round [201] log likelihood: -318954.464285
EM: Round [202] log likelihood: -318954.463629
EM: Round [203] log likelihood: -318954.462980
EM: Round [204] log likelihood: -318954.462338
EM: Round [205] log likelihood: -318954.461704
EM: Round [206] log likelihood: -318954.461077
EM: Round [207] log likelihood: -318954.460457
EM: Round [208] log likelihood: -318954.459844
EM: Round [209] log likelihood: -318954.459238
EM: Round [210] log likelihood: -318954.458639
EM: Round [211] log likelihood: -318954.458046
EM: Round [212] log likelihood: -318954.457461
EM: Round [213] log likelihood: -318954.456881
EM: Round [214] log likelihood: -318954.456309
EM: Round [215] log likelihood: -318954.455742
EM: Round [216] log likelihood: -318954.455183
EM: Round [217] log likelihood: -318954.454629
EM: Round [218] log likelihood: -318954.454082
EM: Round [219] log likelihood: -318954.453540
EM: Round [220] log likelihood: -318954.453005
EM: Round [221] log likelihood: -318954.452476
EM: Round [222] log likelihood: -318954.451952
EM: Round [223] log likelihood: -318954.451435
EM: Round [224] log likelihood: -318954.450923
EM: Round [225] log likelihood: -318954.450417
EM: Round [226] log likelihood: -318954.449917
EM: Round [227] log likelihood: -318954.449422
EM: Round [228] log likelihood: -318954.448933
EM: Round [229] log likelihood: -318954.448450
EM: Round [230] log likelihood: -318954.447971
EM: Round [231] log likelihood: -318954.447498
EM: Round [232] log likelihood: -318954.447030
EM: Round [233] log likelihood: -318954.446568
EM: Round [234] log likelihood: -318954.446110
EM: Round [235] log likelihood: -318954.445658
EM: Round [236] log likelihood: -318954.445211
EM: Round [237] log likelihood: -318954.444768
EM: Round [238] log likelihood: -318954.444331
EM: Round [239] log likelihood: -318954.443898
EM: Round [240] log likelihood: -318954.443471
EM: Round [241] log likelihood: -318954.443048
EM: Round [242] log likelihood: -318954.442629
EM: Round [243] log likelihood: -318954.442216
EM: Round [244] log likelihood: -318954.441807
EM: Round [245] log likelihood: -318954.441402
EM: Round [246] log likelihood: -318954.441002
EM: Round [247] log likelihood: -318954.440606
EM: Round [248] log likelihood: -318954.440215
EM: Round [249] log likelihood: -318954.439828
EM: Round [250] log likelihood: -318954.439445
EM: Round [251] log likelihood: -318954.439066
EM: Round [252] log likelihood: -318954.438692
EM: Round [253] log likelihood: -318954.438322
EM: Round [254] log likelihood: -318954.437956
EM: Round [255] log likelihood: -318954.437594
EM: Round [256] log likelihood: -318954.437236
EM: Round [257] log likelihood: -318954.436881
EM: Round [258] log likelihood: -318954.436531
EM: Round [259] log likelihood: -318954.436185
EM: Round [260] log likelihood: -318954.435842
EM: Round [261] log likelihood: -318954.435503
EM: Round [262] log likelihood: -318954.435168
EM: Round [263] log likelihood: -318954.434837
EM: Round [264] log likelihood: -318954.434509
EM: Round [265] log likelihood: -318954.434185
EM: Round [266] log likelihood: -318954.433864
EM: Round [267] log likelihood: -318954.433547
EM: Round [268] log likelihood: -318954.433234
EM: Round [269] log likelihood: -318954.432923
EM: Round [270] log likelihood: -318954.432617
EM: Round [271] log likelihood: -318954.432313
EM: Round [272] log likelihood: -318954.432013
EM: Round [273] log likelihood: -318954.431716
EM: Round [274] log likelihood: -318954.431423
EM: Round [275] log likelihood: -318954.431132
EM: Round [276] log likelihood: -318954.430845
EM: Round [277] log likelihood: -318954.430561
EM: Round [278] log likelihood: -318954.430280
EM: Round [279] log likelihood: -318954.430002
EM: Round [280] log likelihood: -318954.429728
EM: Round [281] log likelihood: -318954.429456
EM: Round [282] log likelihood: -318954.429187
EM: Round [283] log likelihood: -318954.428921
EM: Round [284] log likelihood: -318954.428658
EM: Round [285] log likelihood: -318954.428398
EM: Round [286] log likelihood: -318954.428141
EM: Round [287] log likelihood: -318954.427886
EM: Round [288] log likelihood: -318954.427634
EM: Round [289] log likelihood: -318954.427385
EM: Round [290] log likelihood: -318954.427139
EM: Round [291] log likelihood: -318954.426896
EM: Round [292] log likelihood: -318954.426655
EM: Round [293] log likelihood: -318954.426416
EM: Round [294] log likelihood: -318954.426181
EM: Round [295] log likelihood: -318954.425948
EM: Round [296] log likelihood: -318954.425717
EM: Round [297] log likelihood: -318954.425489
EM: Round [298] log likelihood: -318954.425263
EM: Round [299] log likelihood: -318954.425040
EM: Round [300] log likelihood: -318954.424819
EM: Round [301] log likelihood: -318954.424601
EM: Round [302] log likelihood: -318954.424385
EM: Round [303] log likelihood: -318954.424172
EM: Round [304] log likelihood: -318954.423960
EM: Round [305] log likelihood: -318954.423751
EM: Round [306] log likelihood: -318954.423545
EM: Round [307] log likelihood: -318954.423340
EM: Round [308] log likelihood: -318954.423138
EM: Round [309] log likelihood: -318954.422938
EM: Round [310] log likelihood: -318954.422740
EM: Round [311] log likelihood: -318954.422544
EM: Round [312] log likelihood: -318954.422351
EM: Round [313] log likelihood: -318954.422159
EM: Round [314] log likelihood: -318954.421970
EM: Round [315] log likelihood: -318954.421782
EM: Round [316] log likelihood: -318954.421597
EM: Round [317] log likelihood: -318954.421414
EM: Round [318] log likelihood: -318954.421232
EM: Round [319] log likelihood: -318954.421053
EM: Round [320] log likelihood: -318954.420875
EM: Round [321] log likelihood: -318954.420700
EM: Round [322] log likelihood: -318954.420526
EM: Round [323] log likelihood: -318954.420354
EM: Round [324] log likelihood: -318954.420184
EM: Round [325] log likelihood: -318954.420016
EM: Round [326] log likelihood: -318954.419850
EM: Round [327] log likelihood: -318954.419686
EM: Round [328] log likelihood: -318954.419523
EM: Round [329] log likelihood: -318954.419362
EM: Round [330] log likelihood: -318954.419203
EM: Round [331] log likelihood: -318954.419046
EM: Round [332] log likelihood: -318954.418890
EM: Round [333] log likelihood: -318954.418736
EM: Round [334] log likelihood: -318954.418583
EM: Round [335] log likelihood: -318954.418433
EM: Round [336] log likelihood: -318954.418283
EM: Round [337] log likelihood: -318954.418136
EM: Round [338] log likelihood: -318954.417990
EM: Round [339] log likelihood: -318954.417846
EM: Round [340] log likelihood: -318954.417703
EM: Round [341] log likelihood: -318954.417562
EM: Round [342] log likelihood: -318954.417422
EM: Round [343] log likelihood: -318954.417284
EM: Round [344] log likelihood: -318954.417147
EM: Round [345] log likelihood: -318954.417012
EM: Round [346] log likelihood: -318954.416878
EM: Round [347] log likelihood: -318954.416746
EM: Round [348] log likelihood: -318954.416615
EM: Round [349] log likelihood: -318954.416485
EM: Round [350] log likelihood: -318954.416357
EM: Round [351] log likelihood: -318954.416230
EM: Round [352] log likelihood: -318954.416105
EM: Round [353] log likelihood: -318954.415981
EM: Round [354] log likelihood: -318954.415858
EM: Round [355] log likelihood: -318954.415737
EM: Round [356] log likelihood: -318954.415617
EM: Round [357] log likelihood: -318954.415498
EM: Round [358] log likelihood: -318954.415381
EM: Round [359] log likelihood: -318954.415264
EM: Round [360] log likelihood: -318954.415149
EM: Round [361] log likelihood: -318954.415036
EM: Round [362] log likelihood: -318954.414923
EM: Round [363] log likelihood: -318954.414812
EM: Round [364] log likelihood: -318954.414702
EM: Round [365] log likelihood: -318954.414593
EM: Round [366] log likelihood: -318954.414485
EM: Round [367] log likelihood: -318954.414379
EM: Round [368] log likelihood: -318954.414273
EM: Round [369] log likelihood: -318954.414169
EM: Round [370] log likelihood: -318954.414066
EM: Round [371] log likelihood: -318954.413964
EM: Round [372] log likelihood: -318954.413863
EM: Round [373] log likelihood: -318954.413763
EM: Stopping iterations at round 373 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.NflU6CvWC2/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.NflU6CvWC2/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.NflU6CvWC2/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.NflU6CvWC2/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.NflU6CvWC2/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.NflU6CvWC2/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.NflU6CvWC2/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.NflU6CvWC2/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.NflU6CvWC2/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.NflU6CvWC2/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.NflU6CvWC2/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.NflU6CvWC2/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.NflU6CvWC2/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.NflU6CvWC2/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 184812266 > /tmp/nxf.NflU6CvWC2/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.NflU6CvWC2/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.NflU6CvWC2/ctat_genome_lib_build_dir > /tmp/nxf.NflU6CvWC2/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.NflU6CvWC2/ctat_genome_lib_build_dir --annotate /tmp/nxf.NflU6CvWC2/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.NflU6CvWC2/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.NflU6CvWC2/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.NflU6CvWC2/ctat_genome_lib_build_dir
-done, see /tmp/nxf.NflU6CvWC2/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.NflU6CvWC2/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.NflU6CvWC2/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 3054, filtered: 11974)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.NflU6CvWC2/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.NflU6CvWC2/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.NflU6CvWC2/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [IGH-.g@-ext]
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WARNING, no entry stored in dbm for [ENSG00000189223.15]
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WARNING, no entry stored in dbm for [ENSG00000223705.9]
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WARNING, no entry stored in dbm for [ENSG00000214433.4]
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WARNING, no entry stored in dbm for [ENSG00000230435.1]
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WARNING, no entry stored in dbm for [ENSG00000201491.1]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
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WARNING, no entry stored in dbm for [ENSG00000259039.3]
WARNING, no entry stored in dbm for [ENSG00000232855.7]
WARNING, no entry stored in dbm for [ENSG00000277592.1]
WARNING, no entry stored in dbm for [ENSG00000228118.3]
WARNING, no entry stored in dbm for [ENSG00000228118.3]
WARNING, no entry stored in dbm for [ENSG00000228118.3]
WARNING, no entry stored in dbm for [ENSG00000236051.7]
WARNING, no entry stored in dbm for [ENSG00000283426.1]
WARNING, no entry stored in dbm for [ENSG00000272849.1]
WARNING, no entry stored in dbm for [ENSG00000249267.7]
WARNING, no entry stored in dbm for [ENSG00000285646.2]
WARNING, no entry stored in dbm for [ENSG00000210144.1]
WARNING, no entry stored in dbm for [ENSG00000254719.1]
WARNING, no entry stored in dbm for [ENSG00000258725.2]
WARNING, no entry stored in dbm for [ENSG00000214955.5]
WARNING, no entry stored in dbm for [ENSG00000243406.6]
WARNING, no entry stored in dbm for [ENSG00000239335.4]
WARNING, no entry stored in dbm for [ENSG00000283696.1]
WARNING, no entry stored in dbm for [ENSG00000228414.7]
WARNING, no entry stored in dbm for [ENSG00000279020.1]
WARNING, no entry stored in dbm for [ENSG00000287864.1]
WARNING, no entry stored in dbm for [ENSG00000267686.2]
WARNING, no entry stored in dbm for [ENSG00000230323.6]
WARNING, no entry stored in dbm for [ENSG00000228340.6]
WARNING, no entry stored in dbm for [ENSG00000275708.1]
WARNING, no entry stored in dbm for [ENSG00000203709.12]
WARNING, no entry stored in dbm for [ENSG00000270069.1]
WARNING, no entry stored in dbm for [ENSG00000253557.6]
WARNING, no entry stored in dbm for [ENSG00000284747.1]
WARNING, no entry stored in dbm for [ENSG00000238133.6]
WARNING, no entry stored in dbm for [ENSG00000239921.6]
WARNING, no entry stored in dbm for [ENSG00000268649.5]
WARNING, no entry stored in dbm for [ENSG00000280441.3]
WARNING, no entry stored in dbm for [ENSG00000280441.3]
WARNING, no entry stored in dbm for [ENSG00000275716.1]
WARNING, no entry stored in dbm for [ENSG00000267519.6]
WARNING, no entry stored in dbm for [ENSG00000204173.11]
WARNING, no entry stored in dbm for [ENSG00000259375.1]
WARNING, no entry stored in dbm for [ENSG00000189238.6]
WARNING, no entry stored in dbm for [ENSG00000253741.2]
WARNING, no entry stored in dbm for [ENSG00000251323.3]
WARNING, no entry stored in dbm for [ENSG00000258913.2]
WARNING, no entry stored in dbm for [ENSG00000231566.2]
WARNING, no entry stored in dbm for [ENSG00000258018.2]
WARNING, no entry stored in dbm for [ENSG00000267023.5]
WARNING, no entry stored in dbm for [ENSG00000257556.2]
WARNING, no entry stored in dbm for [ENSG00000258819.2]
WARNING, no entry stored in dbm for [ENSG00000259719.6]
WARNING, no entry stored in dbm for [ENSG00000259485.2]
WARNING, no entry stored in dbm for [ENSG00000281903.2]
WARNING, no entry stored in dbm for [ENSG00000223544.1]
WARNING, no entry stored in dbm for [ENSG00000250198.3]
WARNING, no entry stored in dbm for [ENSG00000224655.7]
WARNING, no entry stored in dbm for [ENSG00000226476.6]
WARNING, no entry stored in dbm for [ENSG00000232679.2]
WARNING, no entry stored in dbm for [ENSG00000279579.3]
WARNING, no entry stored in dbm for [ENSG00000279579.3]
WARNING, no entry stored in dbm for [ENSG00000234928.1]
WARNING, no entry stored in dbm for [ENSG00000227755.1]
WARNING, no entry stored in dbm for [ENSG00000261008.7]
WARNING, no entry stored in dbm for [ENSG00000146521.10]
WARNING, no entry stored in dbm for [ENSG00000233901.6]
WARNING, no entry stored in dbm for [ENSG00000236204.6]
WARNING, no entry stored in dbm for [ENSG00000228262.10]
WARNING, no entry stored in dbm for [ENSG00000235437.8]
WARNING, no entry stored in dbm for [ENSG00000235437.8]
WARNING, no entry stored in dbm for [ENSG00000228980.4]
WARNING, no entry stored in dbm for [ENSG00000281404.2]
WARNING, no entry stored in dbm for [ENSG00000226673.2]
WARNING, no entry stored in dbm for [ENSG00000228393.4]
WARNING, no entry stored in dbm for [ENSG00000188825.14]
WARNING, no entry stored in dbm for [ENSG00000225316.3]
WARNING, no entry stored in dbm for [ENSG00000283945.1]
WARNING, no entry stored in dbm for [ENSG00000231721.7]
WARNING, no entry stored in dbm for [ENSG00000231721.7]
WARNING, no entry stored in dbm for [ENSG00000225328.2]
WARNING, no entry stored in dbm for [ENSG00000197880.9]
WARNING, no entry stored in dbm for [ENSG00000235448.3]
WARNING, no entry stored in dbm for [ENSG00000287929.1]
WARNING, no entry stored in dbm for [ENSG00000233930.4]
WARNING, no entry stored in dbm for [ENSG00000286948.1]
WARNING, no entry stored in dbm for [ENSG00000285668.1]
WARNING, no entry stored in dbm for [ENSG00000255553.2]
WARNING, no entry stored in dbm for [ENSG00000249036.1]
WARNING, no entry stored in dbm for [ENSG00000287960.1]
WARNING, no entry stored in dbm for [ENSG00000214629.3]
WARNING, no entry stored in dbm for [ENSG00000204277.1]
WARNING, no entry stored in dbm for [ENSG00000235437.8]
WARNING, no entry stored in dbm for [ENSG00000187172.15]
WARNING, no entry stored in dbm for [ENSG00000274461.2]
WARNING, no entry stored in dbm for [ENSG00000270760.1]
WARNING, no entry stored in dbm for [ENSG00000268621.6]
WARNING, no entry stored in dbm for [ENSG00000235092.6]
WARNING, no entry stored in dbm for [ENSG00000235864.1]
WARNING, no entry stored in dbm for [ENSG00000240990.10]
WARNING, no entry stored in dbm for [ENSG00000220412.1]
WARNING, no entry stored in dbm for [ENSG00000251557.2]
WARNING, no entry stored in dbm for [ENSG00000261620.1]
WARNING, no entry stored in dbm for [ENSG00000227259.2]
WARNING, no entry stored in dbm for [ENSG00000238249.2]
WARNING, no entry stored in dbm for [ENSG00000236086.4]
WARNING, no entry stored in dbm for [ENSG00000261729.2]
WARNING, no entry stored in dbm for [ENSG00000179818.14]
WARNING, no entry stored in dbm for [ENSG00000244198.7]
WARNING, no entry stored in dbm for [ENSG00000281566.3]
WARNING, no entry stored in dbm for [ENSG00000233299.1]
WARNING, no entry stored in dbm for [ENSG00000258092.1]
WARNING, no entry stored in dbm for [ENSG00000230590.11]
WARNING, no entry stored in dbm for [ENSG00000234724.1]
WARNING, no entry stored in dbm for [ENSG00000279198.1]
WARNING, no entry stored in dbm for [ENSG00000200156.1]
WARNING, no entry stored in dbm for [ENSG00000199568.1]
WARNING, no entry stored in dbm for [ENSG00000237125.11]
WARNING, no entry stored in dbm for [ENSG00000248205.1]
WARNING, no entry stored in dbm for [ENSG00000183666.17]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000230305.2]
WARNING, no entry stored in dbm for [ENSG00000251451.1]
WARNING, no entry stored in dbm for [ENSG00000230189.7]
WARNING, no entry stored in dbm for [ENSG00000230701.2]
WARNING, no entry stored in dbm for [ENSG00000173209.23]
WARNING, no entry stored in dbm for [ENSG00000243495.1]
WARNING, no entry stored in dbm for [ENSG00000283453.2]
WARNING, no entry stored in dbm for [ENSG00000255474.1]
WARNING, no entry stored in dbm for [ENSG00000266010.2]
WARNING, no entry stored in dbm for [ENSG00000233695.2]
WARNING, no entry stored in dbm for [ENSG00000234741.8]
WARNING, no entry stored in dbm for [ENSG00000196295.12]
WARNING, no entry stored in dbm for [ENSG00000236549.1]
WARNING, no entry stored in dbm for [ENSG00000170919.16]
WARNING, no entry stored in dbm for [ENSG00000283047.1]
WARNING, no entry stored in dbm for [ENSG00000149531.15]
WARNING, no entry stored in dbm for [ENSG00000241352.3]
WARNING, no entry stored in dbm for [ENSG00000234753.5]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000230590.11]
WARNING, no entry stored in dbm for [ENSG00000279457.4]
WARNING, no entry stored in dbm for [ENSG00000233064.2]
WARNING, no entry stored in dbm for [ENSG00000173295.8]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000272888.7]
WARNING, no entry stored in dbm for [ENSG00000205464.13]
WARNING, no entry stored in dbm for [ENSG00000251611.1]
WARNING, no entry stored in dbm for [ENSG00000236438.7]
WARNING, no entry stored in dbm for [ENSG00000285077.2]
WARNING, no entry stored in dbm for [ENSG00000271913.7]
WARNING, no entry stored in dbm for [ENSG00000232860.8]
WARNING, no entry stored in dbm for [ENSG00000260565.7]
WARNING, no entry stored in dbm for [ENSG00000241015.2]
WARNING, no entry stored in dbm for [ENSG00000227070.1]
WARNING, no entry stored in dbm for [ENSG00000224032.7]
WARNING, no entry stored in dbm for [ENSG00000198886.2]
WARNING, no entry stored in dbm for [ENSG00000230424.1]
WARNING, no entry stored in dbm for [ENSG00000179523.5]
WARNING, no entry stored in dbm for [ENSG00000234028.3]
WARNING, no entry stored in dbm for [ENSG00000243701.7]
WARNING, no entry stored in dbm for [ENSG00000255717.7]
WARNING, no entry stored in dbm for [ENSG00000231607.13]
WARNING, no entry stored in dbm for [ENSG00000176124.15]
WARNING, no entry stored in dbm for [ENSG00000260032.2]
WARNING, no entry stored in dbm for [ENSG00000280383.1]
WARNING, no entry stored in dbm for [ENSG00000205534.6]
WARNING, no entry stored in dbm for [ENSG00000249699.1]
WARNING, no entry stored in dbm for [ENSG00000245025.3]
WARNING, no entry stored in dbm for [ENSG00000231890.8]
WARNING, no entry stored in dbm for [ENSG00000226950.8]
WARNING, no entry stored in dbm for [ENSG00000226950.8]
WARNING, no entry stored in dbm for [ENSG00000203875.13]
WARNING, no entry stored in dbm for [ENSG00000222041.11]
WARNING, no entry stored in dbm for [ENSG00000222041.11]
WARNING, no entry stored in dbm for [ENSG00000234231.4]
WARNING, no entry stored in dbm for [ENSG00000270060.1]
WARNING, no entry stored in dbm for [ENSG00000230630.5]
WARNING, no entry stored in dbm for [ENSG00000233937.7]
WARNING, no entry stored in dbm for [ENSG00000247151.7]
WARNING, no entry stored in dbm for [ENSG00000271711.1]
WARNING, no entry stored in dbm for [ENSG00000242193.11]
WARNING, no entry stored in dbm for [ENSG00000232715.1]
WARNING, no entry stored in dbm for [ENSG00000235903.9]
WARNING, no entry stored in dbm for [ENSG00000168405.17]
WARNING, no entry stored in dbm for [ENSG00000279488.1]
WARNING, no entry stored in dbm for [ENSG00000285051.2]
WARNING, no entry stored in dbm for [ENSG00000259755.1]
WARNING, no entry stored in dbm for [ENSG00000214548.18]
WARNING, no entry stored in dbm for [ENSG00000227617.9]
WARNING, no entry stored in dbm for [ENSG00000242593.7]
WARNING, no entry stored in dbm for [ENSG00000278920.1]
WARNING, no entry stored in dbm for [ENSG00000186481.16]
WARNING, no entry stored in dbm for [ENSG00000175779.4]
WARNING, no entry stored in dbm for [ENSG00000237558.1]
WARNING, no entry stored in dbm for [ENSG00000233006.8]
WARNING, no entry stored in dbm for [ENSG00000227097.5]
WARNING, no entry stored in dbm for [ENSG00000263276.1]
WARNING, no entry stored in dbm for [ENSG00000279738.1]
WARNING, no entry stored in dbm for [ENSG00000197149.5]
WARNING, no entry stored in dbm for [ENSG00000229867.2]
WARNING, no entry stored in dbm for [ENSG00000254838.5]
WARNING, no entry stored in dbm for [ENSG00000235510.1]
WARNING, no entry stored in dbm for [ENSG00000285417.1]
WARNING, no entry stored in dbm for [ENSG00000232499.2]
WARNING, no entry stored in dbm for [ENSG00000283408.2]
WARNING, no entry stored in dbm for [ENSG00000270025.2]
WARNING, no entry stored in dbm for [ENSG00000243289.1]
WARNING, no entry stored in dbm for [ENSG00000204177.10]
WARNING, no entry stored in dbm for [ENSG00000204177.10]
WARNING, no entry stored in dbm for [ENSG00000236801.1]
WARNING, no entry stored in dbm for [ENSG00000282851.2]
WARNING, no entry stored in dbm for [ENSG00000218048.2]
WARNING, no entry stored in dbm for [ENSG00000197180.2]
WARNING, no entry stored in dbm for [ENSG00000255240.6]
WARNING, no entry stored in dbm for [ENSG00000270702.1]
WARNING, no entry stored in dbm for [ENSG00000253362.1]
WARNING, no entry stored in dbm for [ENSG00000213981.8]
WARNING, no entry stored in dbm for [ENSG00000197558.13]
WARNING, no entry stored in dbm for [ENSG00000117507.6]
WARNING, no entry stored in dbm for [ENSG00000257252.6]
WARNING, no entry stored in dbm for [ENSG00000261541.1]
WARNING, no entry stored in dbm for [ENSG00000198763.3]
WARNING, no entry stored in dbm for [ENSG00000249310.2]
WARNING, no entry stored in dbm for [ENSG00000224404.2]
WARNING, no entry stored in dbm for [ENSG00000228697.4]
WARNING, no entry stored in dbm for [ENSG00000284639.1]
WARNING, no entry stored in dbm for [ENSG00000239959.1]
WARNING, no entry stored in dbm for [ENSG00000255191.1]
WARNING, no entry stored in dbm for [ENSG00000254459.1]
WARNING, no entry stored in dbm for [ENSG00000164669.13]
WARNING, no entry stored in dbm for [ENSG00000285696.1]
WARNING, no entry stored in dbm for [ENSG00000225569.1]
WARNING, no entry stored in dbm for [ENSG00000280367.1]
WARNING, no entry stored in dbm for [ENSG00000224905.7]
WARNING, no entry stored in dbm for [ENSG00000224905.7]
WARNING, no entry stored in dbm for [ENSG00000215559.8]
WARNING, no entry stored in dbm for [ENSG00000224905.7]
WARNING, no entry stored in dbm for [ENSG00000215559.8]
WARNING, no entry stored in dbm for [ENSG00000279342.2]
WARNING, no entry stored in dbm for [ENSG00000246889.2]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000241860.7]
WARNING, no entry stored in dbm for [ENSG00000248616.1]
WARNING, no entry stored in dbm for [ENSG00000224309.7]
WARNING, no entry stored in dbm for [ENSG00000235550.1]
WARNING, no entry stored in dbm for [ENSG00000240639.3]
WARNING, no entry stored in dbm for [ENSG00000215067.10]
WARNING, no entry stored in dbm for [ENSG00000284999.1]
WARNING, no entry stored in dbm for [ENSG00000224848.2]
WARNING, no entry stored in dbm for [ENSG00000279659.1]
WARNING, no entry stored in dbm for [ENSG00000225096.3]
WARNING, no entry stored in dbm for [ENSG00000285424.1]
WARNING, no entry stored in dbm for [ENSG00000259133.5]
WARNING, no entry stored in dbm for [ENSG00000285077.2]
WARNING, no entry stored in dbm for [ENSG00000234026.1]
WARNING, no entry stored in dbm for [ENSG00000272449.2]
WARNING, no entry stored in dbm for [ENSG00000233064.2]
WARNING, no entry stored in dbm for [ENSG00000273618.1]
WARNING, no entry stored in dbm for [ENSG00000233426.3]
WARNING, no entry stored in dbm for [ENSG00000233415.1]
WARNING, no entry stored in dbm for [ENSG00000286587.1]
WARNING, no entry stored in dbm for [ENSG00000257285.6]
WARNING, no entry stored in dbm for [ENSG00000226812.2]
WARNING, no entry stored in dbm for [ENSG00000277287.1]
WARNING, no entry stored in dbm for [ENSG00000271857.1]
WARNING, no entry stored in dbm for [ENSG00000286546.1]
WARNING, no entry stored in dbm for [ENSG00000287569.1]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000274760.1]
WARNING, no entry stored in dbm for [ENSG00000288543.1]
WARNING, no entry stored in dbm for [ENSG00000288543.1]
WARNING, no entry stored in dbm for [ENSG00000227681.5]
WARNING, no entry stored in dbm for [ENSG00000226310.1]
WARNING, no entry stored in dbm for [ENSG00000287920.1]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000133624.13]
WARNING, no entry stored in dbm for [ENSG00000239523.6]
WARNING, no entry stored in dbm for [ENSG00000231713.2]
WARNING, no entry stored in dbm for [ENSG00000255397.1]
WARNING, no entry stored in dbm for [ENSG00000235437.8]
WARNING, no entry stored in dbm for [ENSG00000240197.1]
WARNING, no entry stored in dbm for [ENSG00000223804.5]
WARNING, no entry stored in dbm for [ENSG00000237550.5]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000274423.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000254701.3]
WARNING, no entry stored in dbm for [ENSG00000238035.8]
WARNING, no entry stored in dbm for [ENSG00000250842.1]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000287882.1]
WARNING, no entry stored in dbm for [ENSG00000278908.1]
WARNING, no entry stored in dbm for [ENSG00000260261.2]
WARNING, no entry stored in dbm for [ENSG00000279613.1]
WARNING, no entry stored in dbm for [ENSG00000278791.1]
WARNING, no entry stored in dbm for [ENSG00000206356.5]
WARNING, no entry stored in dbm for [ENSG00000206356.5]
WARNING, no entry stored in dbm for [ENSG00000206356.5]
WARNING, no entry stored in dbm for [ENSG00000287382.1]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000250829.2]
WARNING, no entry stored in dbm for [ENSG00000270265.1]
WARNING, no entry stored in dbm for [ENSG00000254035.1]
WARNING, no entry stored in dbm for [ENSG00000253557.6]
WARNING, no entry stored in dbm for [ENSG00000282375.1]
WARNING, no entry stored in dbm for [ENSG00000287703.1]
WARNING, no entry stored in dbm for [ENSG00000260430.2]
WARNING, no entry stored in dbm for [ENSG00000287129.1]
WARNING, no entry stored in dbm for [ENSG00000284648.1]
WARNING, no entry stored in dbm for [ENSG00000284648.1]
WARNING, no entry stored in dbm for [ENSG00000248725.3]
WARNING, no entry stored in dbm for [ENSG00000287676.1]
WARNING, no entry stored in dbm for [ENSG00000228303.1]
WARNING, no entry stored in dbm for [ENSG00000249001.5]
WARNING, no entry stored in dbm for [ENSG00000232533.1]
WARNING, no entry stored in dbm for [ENSG00000284624.1]
WARNING, no entry stored in dbm for [ENSG00000231992.1]
WARNING, no entry stored in dbm for [ENSG00000256625.1]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000286912.1]
WARNING, no entry stored in dbm for [ENSG00000266931.2]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [ENSG00000268362.6]
WARNING, no entry stored in dbm for [ENSG00000268362.6]
WARNING, no entry stored in dbm for [ENSG00000248126.1]
WARNING, no entry stored in dbm for [ENSG00000239969.5]
WARNING, no entry stored in dbm for [ENSG00000259418.1]
WARNING, no entry stored in dbm for [ENSG00000285035.1]
WARNING, no entry stored in dbm for [ENSG00000285077.2]
WARNING, no entry stored in dbm for [ENSG00000265936.1]
WARNING, no entry stored in dbm for [ENSG00000214259.3]
WARNING, no entry stored in dbm for [ENSG00000250869.2]
WARNING, no entry stored in dbm for [ENSG00000267801.1]
WARNING, no entry stored in dbm for [ENSG00000279852.1]
WARNING, no entry stored in dbm for [ENSG00000254554.1]
WARNING, no entry stored in dbm for [ENSG00000241889.1]
WARNING, no entry stored in dbm for [ENSG00000268620.1]
WARNING, no entry stored in dbm for [ENSG00000284636.1]
WARNING, no entry stored in dbm for [ENSG00000271986.2]
WARNING, no entry stored in dbm for [ENSG00000239985.2]
WARNING, no entry stored in dbm for [ENSG00000257337.7]
WARNING, no entry stored in dbm for [ENSG00000268652.1]
WARNING, no entry stored in dbm for [ENSG00000268595.1]
WARNING, no entry stored in dbm for [ENSG00000235070.3]
WARNING, no entry stored in dbm for [ENSG00000259433.2]
WARNING, no entry stored in dbm for [ENSG00000229212.8]
WARNING, no entry stored in dbm for [ENSG00000286622.1]
WARNING, no entry stored in dbm for [ENSG00000250001.1]
WARNING, no entry stored in dbm for [ENSG00000244076.1]
WARNING, no entry stored in dbm for [ENSG00000258053.1]
WARNING, no entry stored in dbm for [ENSG00000250764.1]
WARNING, no entry stored in dbm for [ENSG00000271870.1]
WARNING, no entry stored in dbm for [ENSG00000285600.1]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000242338.6]
WARNING, no entry stored in dbm for [ENSG00000266988.6]
WARNING, no entry stored in dbm for [ENSG00000249735.1]
WARNING, no entry stored in dbm for [ENSG00000240418.1]
WARNING, no entry stored in dbm for [ENSG00000240418.1]
WARNING, no entry stored in dbm for [ENSG00000284430.1]
WARNING, no entry stored in dbm for [ENSG00000285106.2]
WARNING, no entry stored in dbm for [ENSG00000285106.2]
WARNING, no entry stored in dbm for [ENSG00000226380.9]
WARNING, no entry stored in dbm for [ENSG00000287306.1]
WARNING, no entry stored in dbm for [ENSG00000273302.1]
WARNING, no entry stored in dbm for [ENSG00000269032.1]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000270964.1]
WARNING, no entry stored in dbm for [ENSG00000288604.1]
WARNING, no entry stored in dbm for [ENSG00000186148.13]
WARNING, no entry stored in dbm for [ENSG00000274499.1]
WARNING, no entry stored in dbm for [ENSG00000286037.1]
WARNING, no entry stored in dbm for [ENSG00000249839.1]
WARNING, no entry stored in dbm for [ENSG00000249839.1]
WARNING, no entry stored in dbm for [ENSG00000251426.1]
WARNING, no entry stored in dbm for [ENSG00000286797.1]
WARNING, no entry stored in dbm for [ENSG00000238045.9]
WARNING, no entry stored in dbm for [ENSG00000238045.9]
WARNING, no entry stored in dbm for [ENSG00000280152.1]
WARNING, no entry stored in dbm for [ENSG00000287263.1]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000249526.1]
WARNING, no entry stored in dbm for [ENSG00000257261.6]
WARNING, no entry stored in dbm for [ENSG00000233565.1]
WARNING, no entry stored in dbm for [ENSG00000257074.3]
WARNING, no entry stored in dbm for [ENSG00000279190.1]
WARNING, no entry stored in dbm for [ENSG00000260850.2]
WARNING, no entry stored in dbm for [ENSG00000231609.7]
WARNING, no entry stored in dbm for [ENSG00000225855.7]
WARNING, no entry stored in dbm for [ENSG00000234210.1]
WARNING, no entry stored in dbm for [ENSG00000267191.2]
WARNING, no entry stored in dbm for [ENSG00000229180.7]
WARNING, no entry stored in dbm for [ENSG00000279009.1]
WARNING, no entry stored in dbm for [ENSG00000267436.1]
WARNING, no entry stored in dbm for [ENSG00000274712.2]
WARNING, no entry stored in dbm for [ENSG00000274712.2]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000241057.2]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000254610.3]
WARNING, no entry stored in dbm for [ENSG00000228204.2]
WARNING, no entry stored in dbm for [ENSG00000240499.7]
WARNING, no entry stored in dbm for [ENSG00000263272.1]
WARNING, no entry stored in dbm for [ENSG00000267698.1]
WARNING, no entry stored in dbm for [ENSG00000251595.7]
WARNING, no entry stored in dbm for [ENSG00000272848.2]
WARNING, no entry stored in dbm for [ENSG00000223508.5]
WARNING, no entry stored in dbm for [ENSG00000227486.2]


	* STAR-Fusion complete.  See output: /tmp/nxf.NflU6CvWC2/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)