AIH curated blacklist: matched 7 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 206
Pass (FILTER=PASS): 26 (12.6%)
Fail (FILTER=FAIL): 180 (87.4%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 7
All 7 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 26
confidence_below_min(medium<high): 25
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 19
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 14
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 14
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 12
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 11
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 11
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 10
confidence_below_min(low<high): 9
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 6
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 5
confidence_below_min(medium<high);aih_curated_blacklist: 4
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 4
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 3
Breakdown by confidence:
high: 26 pass, 2 fail (total: 28)
low: 0 pass, 81 fail (total: 81)
medium: 0 pass, 97 fail (total: 97)
Arriba filter: 206 rows -> 26 PASS; wrote tih_rna_sample_00096_B23WHTKLT4_1.arriba.fusions.filtered.tsv and tih_rna_sample_00096_B23WHTKLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: tih_rna_sample_00096_B23WHTKLT4_1.arriba.fusions.filter_summary.txt