File Info

Filename
fi_workdir/Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/94/ee0c88a81fc8ee93414623d8ddc2c2/fi_workdir/Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 08 10:15:16
                             Started mapping on |	Jun 08 10:22:01
                                    Finished on |	Jun 08 11:36:03
       Mapping speed, Million of reads per hour |	239.83

                          Number of input reads |	295918378
                      Average input read length |	269
                                    UNIQUE READS:
                   Uniquely mapped reads number |	281769117
                        Uniquely mapped reads % |	95.22%
                          Average mapped length |	269.28
                       Number of splices: Total |	330234419
            Number of splices: Annotated (sjdb) |	321959079
                       Number of splices: GT/AG |	326474676
                       Number of splices: GC/AG |	2266791
                       Number of splices: AT/AC |	309443
               Number of splices: Non-canonical |	1183509
                      Mismatch rate per base, % |	0.18%
                         Deletion rate per base |	0.01%
                        Deletion average length |	1.76
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.82
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	11341196
             % of reads mapped to multiple loci |	3.83%
        Number of reads mapped to too many loci |	259214
             % of reads mapped to too many loci |	0.09%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	0
       % of reads unmapped: too many mismatches |	0.00%
            Number of reads unmapped: too short |	2300837
                 % of reads unmapped: too short |	0.78%
                Number of reads unmapped: other |	248014
                     % of reads unmapped: other |	0.08%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%