Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/61/8f45fd2eb51d82dd397ffdc1de7cdc/659_bGc-T1-TRNA-1_B23WHTKLT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9b/e640dac831905516eb931426ebee99/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9b/e640dac831905516eb931426ebee99/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory