Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/48/945ad11b362ea32c7b53a1d02bbc4e/.command.sh Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/48/945ad11b362ea32c7b53a1d02bbc4e/.command.run Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1d/5d86c571d8d65606cf6effcf4c5a87/659_bCu-T1-TRNA-1_B23WHTKLT4_1.Aligned.sortedByCoord.out.bam.bai Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4b/905f81b694194f2e4c2cae1840a5a2/659_bCu-T1-TRNA-1_B23WHTKLT4_1.Aligned.sortedByCoord.out.bam ==> STAGING COMPLETE (4 inputs) [W::hts_idx_load3] The index file is older than the data file: 659_bCu-T1-TRNA-1_B23WHTKLT4_1.Aligned.sortedByCoord.out.bam.bai Load BAM file ... Done