Sample sheet being processed by common lib? Yes
SampleSheet Settings:
FastqCompressionFormat = gzip
NoLaneSplitting = FALSE
OverrideCycles = Y151;I10;I10;Y151
SoftwareVersion = 4.3.6
Index Read 2 (i5): The barcode and UMI outputs will be processed and output in Reverse Complement of Sample Sheet inputs. OverrideCycles bases for this read will be interpreted in reverse.
shared-thread-linux-native-asio output is disabled
bcl-convert Version 4.4.6
Copyright (c) 2014-2025 Illumina, Inc.
Command Line: --tiles s_4 --output-directory output --bcl-input-directory rundir --sample-sheet rundir/SampleSheet.csv
Conversion Begins.
Input BCL Information:
Read Structure: Y151;I10;I10;Y151
RunInfo.xml file lists: 8 lanes, 6272 tiles
BCL file format: cbcl
Positions file format: slocs
Filter file format: filter
Conversion Information:
Tile filtering: converting 784/6272 tiles
Sample Count for Lane 1: 96
Lane 1 will be skipped because there are no tiles to convert (not listed in RunInfo.xml tile list?)
Sample Count for Lane 2: 96
Lane 2 will be skipped because there are no tiles to convert (not listed in RunInfo.xml tile list?)
Sample Count for Lane 3: 96
Lane 3 will be skipped because there are no tiles to convert (not listed in RunInfo.xml tile list?)
Sample Count for Lane 4: 96
Sample Count for Lane 5: 96
Lane 5 will be skipped because there are no tiles to convert (not listed in RunInfo.xml tile list?)
Sample Count for Lane 6: 96
Lane 6 will be skipped because there are no tiles to convert (not listed in RunInfo.xml tile list?)
Sample Count for Lane 7: 96
Lane 7 will be skipped because there are no tiles to convert (not listed in RunInfo.xml tile list?)
Sample Count for Lane 8: 96
Lane 8 will be skipped because there are no tiles to convert (not listed in RunInfo.xml tile list?)
Expected number of sample FASTQ files to be created: 192
# CPU hw threads available: 64
Parallel Tiles: 4. Threads Per Tile: 16
SW compressors: 64
SW decompressors: 32
SW FASTQ compression level: 1
Lane 4 Post-run Information:
Total clusters: 3820642153
Total Genomic Reads: 7641284306
Total Genomic Input Gigabases 1153.83
Minimum reads for a sample: 206434
Maximum reads for a sample: 153371948
Average reads per sample: 74187213.00
Undetermined reads: 519311858
Conversion Complete.