.command.log - Workdir - NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (659_bhK-T1-TRNA-1_B23WHTKLT4_1)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/39/cc370d69238240eab5a8079d10635c/.command.log
Size: 704 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (659_bhK-T1-TRNA-1_B23WHTKLT4_1)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/39/cc370d69238240eab5a8079d10635c/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/66/5005a8f9b8eb652fec779f90fd6059/659_bhK-T1-TRNA-1_B23WHTKLT4_1.md.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/39/cc370d69238240eab5a8079d10635c/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/66/5005a8f9b8eb652fec779f90fd6059/659_bhK-T1-TRNA-1_B23WHTKLT4_1.md.bam
==> STAGING COMPLETE (4 inputs)

+ seqtool saturation -region chr20 659_bhK-T1-TRNA-1_B23WHTKLT4_1.md.bam
[W::hts_idx_load3] The index file is older than the data file: 659_bhK-T1-TRNA-1_B23WHTKLT4_1.md.bai