AIH curated blacklist: matched 5 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 391
Pass (FILTER=PASS): 70 (17.9%)
Fail (FILTER=FAIL): 321 (82.1%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 5
All 5 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 51
confidence_below_min(medium<high): 46
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 45
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 41
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 20
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 14
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 13
confidence_below_min(low<high): 12
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 11
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 9
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 9
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 9
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 6
total_reads_below_min(5.0<8.0): 6
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 6
Breakdown by confidence:
high: 70 pass, 18 fail (total: 88)
low: 0 pass, 152 fail (total: 152)
medium: 0 pass, 151 fail (total: 151)
Arriba filter: 391 rows -> 70 PASS; wrote tih_rna_sample_00461_B23WHTKLT4_2.arriba.fusions.filtered.tsv and tih_rna_sample_00461_B23WHTKLT4_2.arriba.fusions.filtered_pass_only.tsv
Summary written to: tih_rna_sample_00461_B23WHTKLT4_2.arriba.fusions.filter_summary.txt