.command.log - Workdir - NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (659_cRa-T1-TRNA-1_B23WHTKLT4_1)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f2/c6b04bdbcd5613083ddcf83ed90f5b/.command.log
Size: 704 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (659_cRa-T1-TRNA-1_B23WHTKLT4_1)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f2/c6b04bdbcd5613083ddcf83ed90f5b/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/80/f46b37d1366a8671cd44a4ca9c40aa/659_cRa-T1-TRNA-1_B23WHTKLT4_1.md.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f2/c6b04bdbcd5613083ddcf83ed90f5b/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/80/f46b37d1366a8671cd44a4ca9c40aa/659_cRa-T1-TRNA-1_B23WHTKLT4_1.md.bam
==> STAGING COMPLETE (4 inputs)

+ seqtool saturation -region chr20 659_cRa-T1-TRNA-1_B23WHTKLT4_1.md.bam
[W::hts_idx_load3] The index file is older than the data file: 659_cRa-T1-TRNA-1_B23WHTKLT4_1.md.bai