File Info
- Filename
- 659_bCu-T1-TRNA-1_B23WHTKLT4_1.fusions.csv
- Full Path
- s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/91/96747b9552e584db18925b4621e87d/659_bCu-T1-TRNA-1_B23WHTKLT4_1.fusions.csv
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- 2.2 KB
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Content
View in new tab| Fusion | Databases | Score | Explained score | arriba | starfusion |
| TNS1--ALK | Mitelman | 0.375 | 0.5 * (0.125 + 0.125) + 0.5 * (0.500) | position: chr2:217880898#chr2:29225565,reading-frame: in-frame,type: deletion,split_reads1: 89,split_reads2: 80,discordant_mates: 0,coverage1: 6488,coverage2: 18131,confidence: high | position: chr2:217880898:-#chr2:29225565:-,junction_reads: 203,spanning_reads: 0,ffmp: 3.0089 |
| NAV2--NELL1 | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr11:20114795#chr11:20783680,reading-frame: out-of-frame,type: deletion,split_reads1: 15,split_reads2: 14,discordant_mates: 0,coverage1: 3732,coverage2: 485,confidence: high | position: chr11:20114795:+#chr11:20783680:+,junction_reads: 42,spanning_reads: 0,ffmp: 0.6225 | |
| TRPC2--WEE1 | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr11:3636236#chr11:9575888,reading-frame: .,type: deletion,split_reads1: 4,split_reads2: 12,discordant_mates: 0,coverage1: 31,coverage2: 536,confidence: high | position: chr11:3636236:+#chr11:9575888:+,junction_reads: 17,spanning_reads: 0,ffmp: 0.252 | |
| ADAM23--HDAC4 | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr2:206550160#chr2:239176563,reading-frame: in-frame,type: inversion,split_reads1: 2,split_reads2: 10,discordant_mates: 0,coverage1: 124,coverage2: 835,confidence: high | position: chr2:206550160:+#chr2:239176563:-,junction_reads: 16,spanning_reads: 0,ffmp: 0.2372 | |
| PPFIBP2--PARVA | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr11:7639870#chr11:12473745,reading-frame: in-frame,type: deletion,split_reads1: 4,split_reads2: 5,discordant_mates: 0,coverage1: 180,coverage2: 4390,confidence: high | position: chr11:7639870:+#chr11:12473745:+,junction_reads: 10,spanning_reads: 0,ffmp: 0.1482 | |
| IRAG1--ZNF143 | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr11:10652025#chr11:9527530,reading-frame: in-frame,type: inversion,split_reads1: 4,split_reads2: 4,discordant_mates: 0,coverage1: 916,coverage2: 340,confidence: high | position: chr11:10652025:-#chr11:9527530:+,junction_reads: 9,spanning_reads: 0,ffmp: 0.1334 | |
| NELL1--INSC | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr11:20960560#chr11:15246009,reading-frame: out-of-frame,type: inversion/3'-3',split_reads1: 6,split_reads2: 17,discordant_mates: 0,coverage1: 152,coverage2: 692,confidence: high |
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