Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/16/a95cc55c20a7f3441350eb10deaeee/tih_rna_sample_00087_B23WHTKLT4_1.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d2/4cf1543015fa906b7516907c27e008/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d2/4cf1543015fa906b7516907c27e008/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory