Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2d/d6bf34913b44b744eac77afa5b666d/tih_rna_sample_00124_B23WHTKLT4_2.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7a/76202f519ca31284511019294faf21/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7a/76202f519ca31284511019294faf21/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory