Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/43/2ca22f4aedc31498b4a2d8156b8cf6/tih_rna_sample_00461_B23WHTKLT4_1_1.fastp.fastq.gz Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3b/d17bc05865827a25d72394a5105ebd/.command.sh Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3b/d17bc05865827a25d72394a5105ebd/.command.run Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e2/86cc106171759ea7c04547512ced58/tih_rna_sample_00461_B23WHTKLT4_1.Chimeric.out.junction Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/43/2ca22f4aedc31498b4a2d8156b8cf6/tih_rna_sample_00461_B23WHTKLT4_1_2.fastp.fastq.gz ==> STAGING COMPLETE (6 inputs) -ctat genome lib [/tmp/nxf.eWo85vVB5x/ctat_genome_lib_build_dir] validates. CMD: mkdir -p /tmp/nxf.eWo85vVB5x/./_starF_checkpoints CMD: mkdir -p /tmp/nxf.eWo85vVB5x/./star-fusion.preliminary -sample contains 50612085 rnaseq fragments * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.eWo85vVB5x/ctat_genome_lib_build_dir -J /tmp/nxf.eWo85vVB5x/tih_rna_sample_00461_B23WHTKLT4_1.Chimeric.out.junction -O /tmp/nxf.eWo85vVB5x/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 -parsing fusion evidence: /tmp/nxf.eWo85vVB5x/tih_rna_sample_00461_B23WHTKLT4_1.Chimeric.out.junction -building interval tree based on /tmp/nxf.eWo85vVB5x/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.08 min). -mapping reads to genes [10000], rate=46153.85/min [20000], rate=50000.00/min [30000], rate=58064.52/min [40000], rate=63157.89/min [50000], rate=63829.79/min [60000], rate=62068.97/min [70000], rate=61764.71/min [80000], rate=64864.86/min [90000], rate=68354.43/min [100000], rate=68965.52/min [110000], rate=67346.94/min [120000], rate=64864.86/min [130000], rate=63414.63/min [140000], rate=62686.57/min [150000], rate=62937.06/min [160000], rate=64429.53/min [170000], rate=63750.00/min [180000], rate=61363.64/min [190000], rate=60638.30/min [200000], rate=60301.51/min [210000], rate=60287.08/min [220000], rate=61395.35/min [230000], rate=62727.27/min [240000], rate=63436.12/min [250000], rate=62761.51/min [260000], rate=62400.00/min [270000], rate=62790.70/min [280000], rate=62453.53/min [290000], rate=63043.48/min [300000], rate=64056.94/min [310000], rate=64583.33/min [320000], rate=64000.00/min [330000], rate=63258.79/min [340000], rate=63354.04/min [350000], rate=63444.11/min [360000], rate=63905.33/min [370000], rate=63610.32/min [380000], rate=63157.89/min [390000], rate=62903.23/min [400000], rate=62827.23/min [410000], rate=63239.07/min [420000], rate=63797.47/min -building interval tree based on /tmp/nxf.eWo85vVB5x/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.10 min). -mapping reads to genes [10000], rate=42857.14/min [20000], rate=48000.00/min [30000], rate=50000.00/min [40000], rate=53333.33/min [50000], rate=56603.77/min [60000], rate=58064.52/min [70000], rate=60000.00/min [80000], rate=64000.00/min [90000], rate=64285.71/min [100000], rate=58252.43/min [110000], rate=55462.18/min [120000], rate=52941.18/min [130000], rate=51315.79/min [140000], rate=50299.40/min [150000], rate=50561.80/min [160000], rate=50526.32/min [170000], rate=51515.15/min [180000], rate=53201.97/min [190000], rate=53521.13/min [200000], rate=54298.64/min [210000], rate=55021.83/min [220000], rate=55932.20/min [230000], rate=57261.41/min [240000], rate=59016.39/min [250000], rate=60483.87/min [260000], rate=62151.39/min [270000], rate=63281.25/min [280000], rate=64615.38/min [290000], rate=65909.09/min [300000], rate=66914.50/min [310000], rate=67148.01/min [320000], rate=67132.87/min [330000], rate=67576.79/min [340000], rate=67774.09/min [350000], rate=66455.70/min [360000], rate=64670.66/min [370000], rate=62889.52/min [380000], rate=62125.34/min [390000], rate=62068.97/min [400000], rate=61855.67/min [410000], rate=62121.21/min [420000], rate=62376.24/min -building interval tree based on /tmp/nxf.eWo85vVB5x/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.10 min). -mapping reads to genes [10000], rate=85714.29/min [20000], rate=100000.00/min [30000], rate=94736.84/min [40000], rate=104347.83/min [50000], rate=93750.00/min [60000], rate=90000.00/min [70000], rate=91304.35/min [80000], rate=94117.65/min [90000], rate=88524.59/min [100000], rate=86956.52/min [110000], rate=86842.11/min [120000], rate=87804.88/min [130000], rate=81250.00/min [140000], rate=77064.22/min [150000], rate=73170.73/min [160000], rate=70588.24/min [170000], rate=68918.92/min [180000], rate=67500.00/min [190000], rate=66279.07/min [200000], rate=64864.86/min [210000], rate=63959.39/min [220000], rate=63461.54/min [230000], rate=63302.75/min [240000], rate=64285.71/min [250000], rate=65217.39/min [260000], rate=64197.53/min [270000], rate=62068.97/min [280000], rate=60649.82/min [290000], rate=59793.81/min [300000], rate=59210.53/min [310000], rate=58307.21/min [320000], rate=57831.33/min [330000], rate=57391.30/min [340000], rate=57142.86/min [350000], rate=57220.71/min [360000], rate=57754.01/min [370000], rate=58267.72/min [380000], rate=58611.83/min [390000], rate=59090.91/min [400000], rate=58823.53/min [410000], rate=57882.35/min [420000], rate=56884.88/min -building interval tree based on /tmp/nxf.eWo85vVB5x/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.10 min). -mapping reads to genes [10000], rate=150000.00/min [20000], rate=150000.00/min [30000], rate=163636.36/min [40000], rate=150000.00/min [50000], rate=157894.74/min [60000], rate=156521.74/min [70000], rate=120000.00/min [80000], rate=90566.04/min [90000], rate=73972.60/min [100000], rate=67415.73/min [110000], rate=61111.11/min [120000], rate=56250.00/min [130000], rate=53424.66/min [140000], rate=52173.91/min [150000], rate=52023.12/min [160000], rate=51891.89/min [170000], rate=51256.28/min [180000], rate=50943.40/min [190000], rate=50892.86/min [200000], rate=51502.15/min [210000], rate=52500.00/min [220000], rate=53225.81/min [230000], rate=53488.37/min [240000], rate=54135.34/min [250000], rate=54744.53/min [260000], rate=55516.01/min [270000], rate=56643.36/min [280000], rate=56000.00/min [290000], rate=55063.29/min [300000], rate=54380.66/min [310000], rate=54069.77/min [320000], rate=53781.51/min [330000], rate=53804.35/min [340000], rate=53968.25/min [350000], rate=54263.57/min [360000], rate=54683.54/min [370000], rate=53365.38/min [380000], rate=52777.78/min [390000], rate=52466.37/min [400000], rate=52173.91/min [410000], rate=52008.46/min [420000], rate=52282.16/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.eWo85vVB5x/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.eWo85vVB5x/ctat_genome_lib_build_dir --filt_file /tmp/nxf.eWo85vVB5x/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.eWo85vVB5x/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -parsing /tmp/nxf.eWo85vVB5x/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info. 6000000.00 reads per min processed... 3000000.00 reads per min processed... 3000000.00 reads per min processed... 3000000.00 reads per min processed... 2727272.73 reads per min processed... 2769230.77 reads per min processed... 2800000.00 reads per min processed... 2823529.41 reads per min processed... 2842105.26 reads per min processed... 2857142.86 reads per min processed... 2869565.22 reads per min processed... 2880000.00 reads per min processed... 2888888.89 reads per min processed... 2800000.00 reads per min processed... done. * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.eWo85vVB5x/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.eWo85vVB5x/./star-fusion.preliminary/star-fusion -parsing fusion evidence: /tmp/nxf.eWo85vVB5x/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -outputting fusion candidates to file: /tmp/nxf.eWo85vVB5x/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.eWo85vVB5x/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.eWo85vVB5x/tih_rna_sample_00461_B23WHTKLT4_1.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.eWo85vVB5x/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.eWo85vVB5x/./star-fusion.preliminary/star-fusion CMD: mkdir -p /tmp/nxf.eWo85vVB5x/./star-fusion.preliminary/star-fusion.filter.intermediates_dir EM: Starting log likelihood: -21112.976828 EM: Round [1] log likelihood: -21105.087398 EM: Round [2] log likelihood: -21101.210862 EM: Round [3] log likelihood: -21099.090534 EM: Round [4] log likelihood: -21097.879417 EM: Round [5] log likelihood: -21097.166869 EM: Round [6] log likelihood: -21096.733140 EM: Round [7] log likelihood: -21096.458498 EM: Round [8] log likelihood: -21096.277480 EM: Round [9] log likelihood: -21096.153717 EM: Round [10] log likelihood: -21096.066387 EM: Round [11] log likelihood: -21096.003116 EM: Round [12] log likelihood: -21095.956251 EM: Round [13] log likelihood: -21095.920883 EM: Round [14] log likelihood: -21095.893758 EM: Round [15] log likelihood: -21095.872659 EM: Round [16] log likelihood: -21095.856038 EM: Round [17] log likelihood: -21095.842794 EM: Round [18] log likelihood: -21095.832132 EM: Round [19] log likelihood: -21095.823468 EM: Round [20] log likelihood: -21095.816367 EM: Round [21] log likelihood: -21095.810503 EM: Round [22] log likelihood: -21095.805628 EM: Round [23] log likelihood: -21095.801549 EM: Round [24] log likelihood: -21095.798120 EM: Round [25] log likelihood: -21095.795222 EM: Round [26] log likelihood: -21095.792764 EM: Round [27] log likelihood: -21095.790672 EM: Round [28] log likelihood: -21095.788885 EM: Round [29] log likelihood: -21095.787356 EM: Round [30] log likelihood: -21095.786043 EM: Round [31] log likelihood: -21095.784915 EM: Round [32] log likelihood: -21095.783944 EM: Round [33] log likelihood: -21095.783106 EM: Round [34] log likelihood: -21095.782383 EM: Round [35] log likelihood: -21095.781758 EM: Round [36] log likelihood: -21095.781218 EM: Round [37] log likelihood: -21095.780750 EM: Round [38] log likelihood: -21095.780345 EM: Round [39] log likelihood: -21095.779994 EM: Round [40] log likelihood: -21095.779689 EM: Round [41] log likelihood: -21095.779425 EM: Round [42] log likelihood: -21095.779196 EM: Round [43] log likelihood: -21095.778997 EM: Round [44] log likelihood: -21095.778824 EM: Round [45] log likelihood: -21095.778674 EM: Round [46] log likelihood: -21095.778544 EM: Round [47] log likelihood: -21095.778431 EM: Round [48] log likelihood: -21095.778332 EM: Stopping iterations at round 48 due to insufficient improvement in likelihood. EM: Starting log likelihood: -21102.371396 EM: Round [1] log likelihood: -21095.250864 EM: Round [2] log likelihood: -21091.789651 EM: Round [3] log likelihood: -21089.901710 EM: Round [4] log likelihood: -21088.817833 EM: Round [5] log likelihood: -21088.173246 EM: Round [6] log likelihood: -21087.775496 EM: Round [7] log likelihood: -21087.520095 EM: Round [8] log likelihood: -21087.349634 EM: Round [9] log likelihood: -21087.231870 EM: Round [10] log likelihood: -21087.148086 EM: Round [11] log likelihood: -21087.086989 EM: Round [12] log likelihood: -21087.041503 EM: Round [13] log likelihood: -21087.007031 EM: Round [14] log likelihood: -21086.980499 EM: Round [15] log likelihood: -21086.959797 EM: Round [16] log likelihood: -21086.943443 EM: Round [17] log likelihood: -21086.930378 EM: Round [18] log likelihood: -21086.919834 EM: Round [19] log likelihood: -21086.911247 EM: Round [20] log likelihood: -21086.904194 EM: Round [21] log likelihood: -21086.898359 EM: Round [22] log likelihood: -21086.893499 EM: Round [23] log likelihood: -21086.889427 EM: Round [24] log likelihood: -21086.885998 EM: Round [25] log likelihood: -21086.883096 EM: Round [26] log likelihood: -21086.880633 EM: Round [27] log likelihood: -21086.878533 EM: Round [28] log likelihood: -21086.876738 EM: Round [29] log likelihood: -21086.875201 EM: Round [30] log likelihood: -21086.873881 EM: Round [31] log likelihood: -21086.872745 EM: Round [32] log likelihood: -21086.871767 EM: Round [33] log likelihood: -21086.870923 EM: Round [34] log likelihood: -21086.870194 EM: Round [35] log likelihood: -21086.869563 EM: Round [36] log likelihood: -21086.869018 EM: Round [37] log likelihood: -21086.868546 EM: Round [38] log likelihood: -21086.868136 EM: Round [39] log likelihood: -21086.867782 EM: Round [40] log likelihood: -21086.867474 EM: Round [41] log likelihood: -21086.867207 EM: Round [42] log likelihood: -21086.866975 EM: Round [43] log likelihood: -21086.866774 EM: Round [44] log likelihood: -21086.866599 EM: Round [45] log likelihood: -21086.866448 EM: Round [46] log likelihood: -21086.866316 EM: Round [47] log likelihood: -21086.866201 EM: Round [48] log likelihood: -21086.866101 EM: Stopping iterations at round 48 due to insufficient improvement in likelihood. CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.eWo85vVB5x/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.eWo85vVB5x/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.eWo85vVB5x/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.eWo85vVB5x/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.eWo85vVB5x/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.eWo85vVB5x/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.eWo85vVB5x/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20 CMD: cp /tmp/nxf.eWo85vVB5x/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.eWo85vVB5x/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.eWo85vVB5x/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.eWo85vVB5x/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged CMD: ln -sf /tmp/nxf.eWo85vVB5x/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.eWo85vVB5x/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered * Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.eWo85vVB5x/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 50612085 > /tmp/nxf.eWo85vVB5x/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM * Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.eWo85vVB5x/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.eWo85vVB5x/ctat_genome_lib_build_dir > /tmp/nxf.eWo85vVB5x/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.eWo85vVB5x/ctat_genome_lib_build_dir --annotate /tmp/nxf.eWo85vVB5x/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.eWo85vVB5x/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot * Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.eWo85vVB5x/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.eWo85vVB5x/ctat_genome_lib_build_dir -done, see /tmp/nxf.eWo85vVB5x/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass * Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.eWo85vVB5x/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.eWo85vVB5x/ctat_genome_lib_build_dir -filter_likely_RT_artifacts: (pass: 466, filtered: 2511) * Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.eWo85vVB5x/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001 * Running CMD: cp /tmp/nxf.eWo85vVB5x/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv * Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.eWo85vVB5x/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv WARNING, no entry stored in dbm for [ENSG00000199218.1] WARNING, no entry stored in dbm for [ENSG00000201428.1] WARNING, no entry stored in dbm for [ENSG00000286784.1] WARNING, no entry stored in dbm for [ENSG00000245750.10] WARNING, no entry stored in dbm for [ENSG00000249859.12] WARNING, no entry stored in dbm for [ENSG00000202512.1] WARNING, no entry stored in dbm for [ENSG00000222386.1] WARNING, no entry stored in dbm for [ENSG00000223006.1] WARNING, no entry stored in dbm for [ENSG00000201428.1] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [ENSG00000230559.1] WARNING, no entry stored in dbm for [ENSG00000248455.6] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000281404.2] WARNING, no entry stored in dbm for [ENSG00000286162.2] WARNING, no entry stored in dbm for [ENSG00000285911.1] WARNING, no entry stored in dbm for [ENSG00000260126.2] WARNING, no entry stored in dbm for [ENSG00000274712.2] WARNING, no entry stored in dbm for [ENSG00000267254.7] WARNING, no entry stored in dbm for [ENSG00000225178.5] WARNING, no entry stored in dbm for [ENSG00000262693.1] WARNING, no entry stored in dbm for [ENSG00000250802.7] WARNING, no entry stored in dbm for [ENSG00000213062.5] WARNING, no entry stored in dbm for [ENSG00000265735.2] WARNING, no entry stored in dbm for [ENSG00000263740.2] WARNING, no entry stored in dbm for [ENSG00000240869.3] WARNING, no entry stored in dbm for [ENSG00000276168.1] WARNING, no entry stored in dbm for [ENSG00000282885.2] WARNING, no entry stored in dbm for [ENSG00000282458.1] WARNING, no entry stored in dbm for [ENSG00000225292.2] WARNING, no entry stored in dbm for [ENSG00000251504.1] WARNING, no entry stored in dbm for [ENSG00000233178.7] WARNING, no entry stored in dbm for [ENSG00000230061.2] WARNING, no entry stored in dbm for [ENSG00000170919.16] WARNING, no entry stored in dbm for [ENSG00000254543.1] WARNING, no entry stored in dbm for [ENSG00000259977.1] WARNING, no entry stored in dbm for [ENSG00000260796.1] WARNING, no entry stored in dbm for [ENSG00000286452.1] WARNING, no entry stored in dbm for [ENSG00000279537.1] WARNING, no entry stored in dbm for [ENSG00000158482.10] WARNING, no entry stored in dbm for [ENSG00000276721.1] WARNING, no entry stored in dbm for [ENSG00000223553.6] WARNING, no entry stored in dbm for [ENSG00000225689.2] WARNING, no entry stored in dbm for [ENSG00000218725.2] WARNING, no entry stored in dbm for [ENSG00000215444.2] WARNING, no entry stored in dbm for [ENSG00000253634.3] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000262117.5] WARNING, no entry stored in dbm for [ENSG00000184139.8] WARNING, no entry stored in dbm for [ENSG00000215869.4] WARNING, no entry stored in dbm for [ENSG00000280171.1] WARNING, no entry stored in dbm for [ENSG00000285533.2] WARNING, no entry stored in dbm for [ENSG00000264538.6] WARNING, no entry stored in dbm for [ENSG00000231503.4] WARNING, no entry stored in dbm for [ENSG00000229321.2] WARNING, no entry stored in dbm for [ENSG00000260496.3] WARNING, no entry stored in dbm for [ENSG00000254539.1] WARNING, no entry stored in dbm for [ENSG00000261208.1] WARNING, no entry stored in dbm for [ENSG00000173209.23] WARNING, no entry stored in dbm for [ENSG00000180747.15] WARNING, no entry stored in dbm for [ENSG00000248008.3] WARNING, no entry stored in dbm for [ENSG00000265802.2] WARNING, no entry stored in dbm for [ENSG00000265802.2] WARNING, no entry stored in dbm for [ENSG00000229739.4] WARNING, no entry stored in dbm for [ENSG00000267278.6] WARNING, no entry stored in dbm for [ENSG00000275620.1] WARNING, no entry stored in dbm for [ENSG00000248323.7] WARNING, no entry stored in dbm for [ENSG00000173727.12] WARNING, no entry stored in dbm for [ENSG00000261008.7] WARNING, no entry stored in dbm for [ENSG00000238113.7] WARNING, no entry stored in dbm for [ENSG00000241621.1] WARNING, no entry stored in dbm for [ENSG00000286610.1] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000254514.1] WARNING, no entry stored in dbm for [ENSG00000225064.1] WARNING, no entry stored in dbm for [ENSG00000203865.11] WARNING, no entry stored in dbm for [ENSG00000287784.1] WARNING, no entry stored in dbm for [ENSG00000261226.1] WARNING, no entry stored in dbm for [ENSG00000286784.1] WARNING, no entry stored in dbm for [ENSG00000244026.6] WARNING, no entry stored in dbm for [ENSG00000243572.1] WARNING, no entry stored in dbm for [ENSG00000215908.10] WARNING, no entry stored in dbm for [ENSG00000230335.1] WARNING, no entry stored in dbm for [ENSG00000218089.1] WARNING, no entry stored in dbm for [ENSG00000230768.9] WARNING, no entry stored in dbm for [ENSG00000231252.3] WARNING, no entry stored in dbm for [ENSG00000286071.1] WARNING, no entry stored in dbm for [ENSG00000286622.1] WARNING, no entry stored in dbm for [ENSG00000279066.1] WARNING, no entry stored in dbm for [ENSG00000248740.6] WARNING, no entry stored in dbm for [ENSG00000286162.2] WARNING, no entry stored in dbm for [ENSG00000285756.2] WARNING, no entry stored in dbm for [ENSG00000285756.2] WARNING, no entry stored in dbm for [ENSG00000285756.2] WARNING, no entry stored in dbm for [ENSG00000231069.1] WARNING, no entry stored in dbm for [ENSG00000286475.1] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [ENSG00000205534.6] WARNING, no entry stored in dbm for [ENSG00000270025.2] WARNING, no entry stored in dbm for [ENSG00000243289.1] WARNING, no entry stored in dbm for [ENSG00000204177.10] WARNING, no entry stored in dbm for [ENSG00000265018.6] WARNING, no entry stored in dbm for [ENSG00000287126.1] WARNING, no entry stored in dbm for [ENSG00000254560.6] WARNING, no entry stored in dbm for [ENSG00000249859.12] WARNING, no entry stored in dbm for [ENSG00000261404.7] WARNING, no entry stored in dbm for [ENSG00000229498.1] WARNING, no entry stored in dbm for [ENSG00000225879.2] WARNING, no entry stored in dbm for [ENSG00000224251.6] WARNING, no entry stored in dbm for [ENSG00000165121.11] WARNING, no entry stored in dbm for [ENSG00000263740.2] WARNING, no entry stored in dbm for [ENSG00000165121.11] WARNING, no entry stored in dbm for [ENSG00000282885.2] WARNING, no entry stored in dbm for [ENSG00000259087.5] WARNING, no entry stored in dbm for [ENSG00000230869.1] WARNING, no entry stored in dbm for [ENSG00000272140.2] WARNING, no entry stored in dbm for [ENSG00000260126.2] WARNING, no entry stored in dbm for [ENSG00000278212.2] WARNING, no entry stored in dbm for [ENSG00000187172.15] WARNING, no entry stored in dbm for [ENSG00000285822.1] WARNING, no entry stored in dbm for [ENSG00000258590.5] WARNING, no entry stored in dbm for [ENSG00000248583.1] WARNING, no entry stored in dbm for [ENSG00000278931.1] WARNING, no entry stored in dbm for [ENSG00000284428.1] WARNING, no entry stored in dbm for [ENSG00000250546.6] WARNING, no entry stored in dbm for [ENSG00000234129.8] WARNING, no entry stored in dbm for [ENSG00000240418.1] WARNING, no entry stored in dbm for [ENSG00000285106.2] WARNING, no entry stored in dbm for [ENSG00000283132.1] WARNING, no entry stored in dbm for [ENSG00000279516.2] WARNING, no entry stored in dbm for [ENSG00000214243.3] WARNING, no entry stored in dbm for [ENSG00000286134.2] WARNING, no entry stored in dbm for [ENSG00000237296.9] * STAR-Fusion complete. See output: /tmp/nxf.eWo85vVB5x/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)