Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ce/f57475d263d9dd6ad84a1cc5c0d760/659_bCu-T1-TRNA-1_B23WHTKLT4_1
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5c/d98ea39ff6425833cda0204a67ff12/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5c/d98ea39ff6425833cda0204a67ff12/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4c/0f08a54b1f04cf9bbac2bdd191f276/659_bCu-T1-TRNA-1_B23WHTKLT4_1.sample_qc.tsv
==> STAGING COMPLETE (4 inputs)

Processing Kallisto file: 659_bCu-T1-TRNA-1_B23WHTKLT4_1/abundance.h5
Successfully converted 659_bCu-T1-TRNA-1_B23WHTKLT4_1/abundance.h5 to 659_bCu-T1-TRNA-1_B23WHTKLT4_1_kallisto_mqc.tsv
  Sample: 659_bCu-T1-TRNA-1_B23WHTKLT4_1
  Mean Fragment Length: 121.1 bp
  Median Fragment Length: 112.0 bp
  pct_mito_est_counts: 0.001%
  pct_ribo_est_counts: 0.68%
  pct_hk_est_counts: 0.245%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.002%
  pct_ribo_tpm: 2.256%
  pct_hk_tpm: 0.397%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 0.371%