AIH curated blacklist: matched 3 fusion rows (breakpoint_ID in qualified set)
================================================================================
ARRIBA FILTERING SUMMARY
================================================================================
Total fusions: 305
Pass (FILTER=PASS): 53 (17.4%)
Fail (FILTER=FAIL): 252 (82.6%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 3
All 3 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 40
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 36
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 34
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 33
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 19
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 17
total_reads_below_min(6.0<8.0): 11
confidence_below_min(low<high): 9
total_reads_below_min(5.0<8.0): 7
total_reads_below_min(4.0<8.0): 6
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 6
total_reads_below_min(3.0<8.0): 6
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 4
total_reads_below_min(7.0<8.0): 4
Breakdown by confidence:
high: 53 pass, 34 fail (total: 87)
low: 0 pass, 106 fail (total: 106)
medium: 0 pass, 112 fail (total: 112)
Arriba filter: 305 rows -> 53 PASS; wrote tih_rna_sample_00161_B23WHTKLT4_1.arriba.fusions.filtered.tsv and tih_rna_sample_00161_B23WHTKLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: tih_rna_sample_00161_B23WHTKLT4_1.arriba.fusions.filter_summary.txt