AIH curated blacklist: matched 7 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 78
Pass (FILTER=PASS): 4 (5.1%)
Fail (FILTER=FAIL): 74 (94.9%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 7
All 7 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 19
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 13
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 10
confidence_below_min(medium<high): 8
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 6
confidence_below_min(medium<high);aih_curated_blacklist: 3
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 3
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 3
confidence_below_min(low<high): 2
aih_curated_blacklist: 1
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0);aih_curated_blacklist: 1
confidence_below_min(low<high);aih_curated_blacklist: 1
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 1
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 1
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 1
Breakdown by confidence:
high: 4 pass, 1 fail (total: 5)
low: 0 pass, 45 fail (total: 45)
medium: 0 pass, 28 fail (total: 28)
Arriba filter: 78 rows -> 4 PASS; wrote 659_bQZ-T1-TRNA-1_B23WHTKLT4_1.arriba.fusions.filtered.tsv and 659_bQZ-T1-TRNA-1_B23WHTKLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: 659_bQZ-T1-TRNA-1_B23WHTKLT4_1.arriba.fusions.filter_summary.txt