Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/63/b02a7396bf6caf366aae276126d7b9/ref_annot.bed
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/82/b2d75a382ddc4d19620187d6ccbd1a/.command.sh
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/82/b2d75a382ddc4d19620187d6ccbd1a/.command.run
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/12/b55b988f0db827ef6281c559d1ba3f/659_bTo-T1-TRNA-1_B23WHTKLT4_1.Aligned.sortedByCoord.out.bam
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1c/894c376224ce4045805d906648f998/659_bTo-T1-TRNA-1_B23WHTKLT4_1.Aligned.sortedByCoord.out.bam.bai
==> STAGING COMPLETE (5 inputs)
processing ref_annot.bed ... Done
[W::hts_idx_load3] The index file is older than the data file: 659_bTo-T1-TRNA-1_B23WHTKLT4_1.Aligned.sortedByCoord.out.bam.bai
processing 659_bTo-T1-TRNA-1_B23WHTKLT4_1.Aligned.sortedByCoord.out.bam ... Finished