-ctat genome lib [/tmp/nxf.fj2ZwTlOyx/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.fj2ZwTlOyx/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.fj2ZwTlOyx/./star-fusion.preliminary
-sample contains 243765595 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.fj2ZwTlOyx/ctat_genome_lib_build_dir -J /tmp/nxf.fj2ZwTlOyx/659_cRB-T1-TRNA-1_B23WHTKLT4_1.Chimeric.out.junction -O /tmp/nxf.fj2ZwTlOyx/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4
-parsing fusion evidence: /tmp/nxf.fj2ZwTlOyx/659_cRB-T1-TRNA-1_B23WHTKLT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.fj2ZwTlOyx/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes
[10000], rate=120000.00/min
[20000], rate=120000.00/min
[30000], rate=120000.00/min
[40000], rate=114285.71/min
[50000], rate=100000.00/min
[60000], rate=87804.88/min
[70000], rate=79245.28/min
[80000], rate=75000.00/min
[90000], rate=72000.00/min
[100000], rate=70588.24/min
[110000], rate=68750.00/min
[120000], rate=67924.53/min
[130000], rate=67826.09/min
[140000], rate=67200.00/min
[150000], rate=67669.17/min
[160000], rate=67605.63/min
[170000], rate=68000.00/min
[180000], rate=68354.43/min
[190000], rate=68674.70/min
[200000], rate=69364.16/min
[210000], rate=70000.00/min
[220000], rate=70588.24/min
[230000], rate=71502.59/min
[240000], rate=73096.45/min
[250000], rate=74257.43/min
[260000], rate=75000.00/min
[270000], rate=76056.34/min
[280000], rate=77064.22/min
[290000], rate=78026.91/min
[300000], rate=78602.62/min
[310000], rate=79487.18/min
[320000], rate=80334.73/min
[330000], rate=81147.54/min
[340000], rate=81927.71/min
[350000], rate=83003.95/min
[360000], rate=83720.93/min
[370000], rate=85057.47/min
[380000], rate=84132.84/min
[390000], rate=82978.72/min
[400000], rate=81911.26/min
[410000], rate=81188.12/min
[420000], rate=80254.78/min
[430000], rate=80124.22/min
[440000], rate=80000.00/min
[450000], rate=79411.76/min
[460000], rate=79083.09/min
[470000], rate=78770.95/min
[480000], rate=78688.52/min
[490000], rate=78191.49/min
[500000], rate=77720.21/min
[510000], rate=77078.09/min
[520000], rate=76847.29/min
[530000], rate=76076.56/min
[540000], rate=75700.93/min
[550000], rate=75170.84/min
[560000], rate=74832.96/min
[570000], rate=74672.49/min
[580000], rate=74518.20/min
[590000], rate=74526.32/min
[600000], rate=74534.16/min
[610000], rate=74390.24/min
[620000], rate=74251.50/min
[630000], rate=74117.65/min
[640000], rate=74274.66/min
[650000], rate=74285.71/min
[660000], rate=74858.22/min
[670000], rate=75000.00/min
[680000], rate=75276.75/min
[690000], rate=75685.56/min
[700000], rate=76086.96/min
[710000], rate=76344.09/min
[720000], rate=76731.79/min
[730000], rate=77112.68/min
[740000], rate=77622.38/min
[750000], rate=78125.00/min
[760000], rate=77419.35/min
[770000], rate=76616.92/min
[780000], rate=75850.89/min
[790000], rate=75118.86/min
[800000], rate=74766.36/min
[810000], rate=73972.60/min
[820000], rate=73214.29/min
[830000], rate=72700.73/min
[840000], rate=71794.87/min
[850000], rate=71129.71/min
[860000], rate=70395.63/min
[870000], rate=69786.10/min
[880000], rate=69382.39/min
[890000], rate=69350.65/min
[900000], rate=69230.77/min
[910000], rate=69201.52/min
[920000], rate=69259.72/min
[930000], rate=69230.77/min
[940000], rate=69033.05/min
[950000], rate=69090.91/min
[960000], rate=69147.66/min
[970000], rate=69121.14/min
[980000], rate=69176.47/min
[990000], rate=68829.66/min
[1000000], rate=68728.52/min
[1010000], rate=68707.48/min
[1020000], rate=68609.87/min
[1030000], rate=68666.67/min
[1040000], rate=68571.43/min
[1050000], rate=68552.77/min
[1060000], rate=68534.48/min
[1070000], rate=68810.29/min
[1080000], rate=69156.88/min
[1090000], rate=69426.75/min
[1100000], rate=69620.25/min
[1110000], rate=69811.32/min
[1120000], rate=70000.00/min
[1130000], rate=70113.75/min
[1140000], rate=70370.37/min
[1150000], rate=70552.15/min
[1160000], rate=70803.66/min
[1170000], rate=71052.63/min
[1180000], rate=71370.97/min
[1190000], rate=71758.79/min
[1200000], rate=72000.00/min
[1210000], rate=72238.81/min
[1220000], rate=72547.08/min
[1230000], rate=72566.37/min
[1240000], rate=72233.01/min
[1250000], rate=71770.33/min
[1260000], rate=71253.53/min
[1270000], rate=70949.72/min
[1280000], rate=70588.24/min
[1290000], rate=70427.66/min
[1300000], rate=70270.27/min
[1310000], rate=70241.29/min
[1320000], rate=70150.58/min
[1330000], rate=70246.48/min
[1340000], rate=70218.34/min
[1350000], rate=70190.64/min
[1360000], rate=70223.75/min
[1370000], rate=70316.51/min
[1380000], rate=70468.09/min
[1390000], rate=70677.97/min
[1400000], rate=70826.31/min
[1410000], rate=70973.15/min
[1420000], rate=71177.94/min
[1430000], rate=71440.47/min
[1440000], rate=71880.20/min
[1450000], rate=72199.17/min
[1460000], rate=72576.64/min
[1470000], rate=72952.85/min
[1480000], rate=73267.33/min
[1490000], rate=73519.74/min
[1500000], rate=73891.63/min
[1510000], rate=74140.75/min
[1520000], rate=74388.25/min
[1530000], rate=74694.87/min
[1540000], rate=74878.44/min
[1550000], rate=75060.53/min
[1560000], rate=75000.00/min
[1570000], rate=74940.33/min
[1580000], rate=74822.42/min
[1590000], rate=74647.89/min
[1600000], rate=74592.07/min
[1610000], rate=74422.19/min
[1620000], rate=74368.78/min
[1630000], rate=74429.22/min
[1640000], rate=74376.42/min
[1650000], rate=74324.32/min
[1660000], rate=74383.87/min
[1670000], rate=74442.79/min
[1680000], rate=74556.21/min
[1690000], rate=74613.69/min
[1700000], rate=74615.95/min
[1710000], rate=74672.49/min
[1720000], rate=74782.61/min
[1730000], rate=74891.77/min
[1740000], rate=75000.00/min
[1750000], rate=75161.06/min
[1760000], rate=75160.14/min
[1770000], rate=75212.46/min
[1780000], rate=75477.03/min
[1790000], rate=75687.10/min
[1800000], rate=75789.47/min
[1810000], rate=75944.06/min
[1820000], rate=76150.63/min
[1830000], rate=76356.05/min
[1840000], rate=76454.29/min
[1850000], rate=76446.28/min
[1860000], rate=76386.04/min
[1870000], rate=76326.53/min
[1880000], rate=76216.22/min
[1890000], rate=76056.34/min
[1900000], rate=75898.80/min
[1910000], rate=75793.65/min
[1920000], rate=75689.88/min
[1930000], rate=75686.27/min
[1940000], rate=75731.95/min
[1950000], rate=75777.20/min
[1960000], rate=75870.97/min
[1970000], rate=75915.22/min
[1980000], rate=76056.34/min
[1990000], rate=76099.43/min
[2000000], rate=76238.88/min
[2010000], rate=76377.45/min
[2020000], rate=76466.88/min
[2030000], rate=76603.77/min
[2040000], rate=76836.16/min
[2050000], rate=77019.41/min
[2060000], rate=77201.75/min
[2070000], rate=77383.18/min
[2080000], rate=77515.53/min
[2090000], rate=77695.17/min
[2100000], rate=77825.82/min -building interval tree based on /tmp/nxf.fj2ZwTlOyx/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.05 min).
-mapping reads to genes
[10000], rate=46153.85/min
[20000], rate=48000.00/min
[30000], rate=50000.00/min
[40000], rate=52173.91/min
[50000], rate=53571.43/min
[60000], rate=54545.45/min
[70000], rate=56000.00/min
[80000], rate=56470.59/min
[90000], rate=58064.52/min
[100000], rate=59405.94/min
[110000], rate=61682.24/min
[120000], rate=63157.89/min
[130000], rate=65000.00/min
[140000], rate=66666.67/min
[150000], rate=68181.82/min
[160000], rate=69565.22/min
[170000], rate=70833.33/min
[180000], rate=72483.22/min
[190000], rate=73548.39/min
[200000], rate=75000.00/min
[210000], rate=76363.64/min
[220000], rate=78106.51/min
[230000], rate=79768.79/min
[240000], rate=81355.93/min
[250000], rate=82872.93/min
[260000], rate=84782.61/min
[270000], rate=82653.06/min
[280000], rate=79620.85/min
[290000], rate=76651.98/min
[300000], rate=74380.17/min
[310000], rate=72373.54/min
[320000], rate=70848.71/min
[330000], rate=69473.68/min
[340000], rate=68227.42/min
[350000], rate=66878.98/min
[360000], rate=65853.66/min
[370000], rate=64912.28/min
[380000], rate=64044.94/min
[390000], rate=63243.24/min
[400000], rate=62663.19/min
[410000], rate=61964.74/min
[420000], rate=61613.69/min
[430000], rate=61428.57/min
[440000], rate=61252.90/min
[450000], rate=60810.81/min
[460000], rate=60130.72/min
[470000], rate=60000.00/min
[480000], rate=59875.26/min
[490000], rate=59877.80/min
[500000], rate=59880.24/min
[510000], rate=59649.12/min
[520000], rate=59541.98/min
[530000], rate=59439.25/min
[540000], rate=59449.54/min
[550000], rate=59459.46/min
[560000], rate=59574.47/min
[570000], rate=59685.86/min
[580000], rate=59793.81/min
[590000], rate=60000.00/min
[600000], rate=60200.67/min
[610000], rate=60296.54/min
[620000], rate=60291.73/min
[630000], rate=60095.39/min
[640000], rate=60377.36/min
[650000], rate=60653.19/min
[660000], rate=60829.49/min
[670000], rate=61001.52/min
[680000], rate=61261.26/min
[690000], rate=61515.60/min
[700000], rate=61855.67/min
[710000], rate=62189.78/min
[720000], rate=62608.70/min
[730000], rate=62840.75/min
[740000], rate=63068.18/min
[750000], rate=63291.14/min
[760000], rate=63687.15/min
[770000], rate=63988.92/min
[780000], rate=64285.71/min
[790000], rate=64489.80/min
[800000], rate=64777.33/min
[810000], rate=65147.45/min
[820000], rate=65512.65/min
[830000], rate=65960.26/min
[840000], rate=66315.79/min
[850000], rate=66753.93/min
[860000], rate=67100.13/min
[870000], rate=67441.86/min
[880000], rate=67519.18/min
[890000], rate=67169.81/min
[900000], rate=66831.68/min
[910000], rate=66829.87/min
[920000], rate=66828.09/min
[930000], rate=67067.31/min
[940000], rate=67142.86/min
[950000], rate=67375.89/min
[960000], rate=67605.63/min
[970000], rate=67911.32/min
[980000], rate=68055.56/min
[990000], rate=68275.86/min
[1000000], rate=68493.15/min
[1010000], rate=68707.48/min
[1020000], rate=68996.62/min
[1030000], rate=69282.51/min
[1040000], rate=69565.22/min
[1050000], rate=69690.27/min
[1060000], rate=69967.00/min
[1070000], rate=70394.74/min
[1080000], rate=70819.67/min
[1090000], rate=71164.31/min
[1100000], rate=71505.96/min
[1110000], rate=71844.66/min
[1120000], rate=72025.72/min
[1130000], rate=72435.90/min
[1140000], rate=72843.45/min
[1150000], rate=73015.87/min
[1160000], rate=73417.72/min
[1170000], rate=73817.03/min
[1180000], rate=74136.13/min
[1190000], rate=74452.55/min
[1200000], rate=74921.96/min
[1210000], rate=75311.20/min
[1220000], rate=75463.92/min
[1230000], rate=75770.02/min
[1240000], rate=75995.91/min
[1250000], rate=76219.51/min
[1260000], rate=76518.22/min
[1270000], rate=76814.52/min
[1280000], rate=77031.09/min
[1290000], rate=77168.49/min
[1300000], rate=77380.95/min
[1310000], rate=77514.79/min
[1320000], rate=77723.26/min
[1330000], rate=77929.69/min
[1340000], rate=78210.12/min
[1350000], rate=78488.37/min
[1360000], rate=78764.48/min
[1370000], rate=78962.54/min
[1380000], rate=79007.63/min
[1390000], rate=79052.13/min
[1400000], rate=79170.59/min
[1410000], rate=79287.72/min
[1420000], rate=79329.61/min
[1430000], rate=79297.60/min
[1440000], rate=79338.84/min
[1450000], rate=79524.68/min
[1460000], rate=79708.83/min
[1470000], rate=79963.74/min
[1480000], rate=80072.14/min
[1490000], rate=80323.45/min
[1500000], rate=80500.89/min
[1510000], rate=80748.66/min
[1520000], rate=80994.67/min
[1530000], rate=81167.11/min
[1540000], rate=81338.03/min
[1550000], rate=81507.45/min
[1560000], rate=81250.00/min
[1570000], rate=80789.02/min
[1580000], rate=80407.12/min
[1590000], rate=80100.76/min
[1600000], rate=79734.22/min
[1610000], rate=79440.79/min
[1620000], rate=79282.22/min
[1630000], rate=79062.25/min
[1640000], rate=78846.15/min
[1650000], rate=78571.43/min
[1660000], rate=78117.65/min
[1670000], rate=77795.03/min
[1680000], rate=77478.86/min
[1690000], rate=77227.72/min
[1700000], rate=76923.08/min
[1710000], rate=76510.07/min
[1720000], rate=76162.36/min
[1730000], rate=75932.70/min
[1740000], rate=75816.99/min
[1750000], rate=75431.03/min
[1760000], rate=75213.68/min
[1770000], rate=75000.00/min
[1780000], rate=74789.92/min
[1790000], rate=74791.09/min
[1800000], rate=74740.48/min
[1810000], rate=74793.39/min
[1820000], rate=74794.52/min
[1830000], rate=74897.68/min
[1840000], rate=74949.08/min
[1850000], rate=75000.00/min
[1860000], rate=75050.44/min
[1870000], rate=75100.40/min
[1880000], rate=75300.40/min
[1890000], rate=75449.10/min
[1900000], rate=75747.51/min
[1910000], rate=76045.12/min
[1920000], rate=76392.57/min
[1930000], rate=76587.30/min
[1940000], rate=76528.60/min
[1950000], rate=76171.88/min
[1960000], rate=76067.27/min
[1970000], rate=75964.01/min
[1980000], rate=75862.07/min
[1990000], rate=75809.52/min
[2000000], rate=75709.78/min
[2010000], rate=75658.72/min
[2020000], rate=75608.23/min
[2030000], rate=75605.21/min
[2040000], rate=75602.22/min
[2050000], rate=75692.31/min
[2060000], rate=75688.92/min
[2070000], rate=75777.91/min
[2080000], rate=75866.26/min
[2090000], rate=75953.97/min -building interval tree based on /tmp/nxf.fj2ZwTlOyx/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.05 min).
-mapping reads to genes
[10000], rate=120000.00/min
[20000], rate=109090.91/min
[30000], rate=78260.87/min
[40000], rate=75000.00/min
[50000], rate=71428.57/min
[60000], rate=70588.24/min
[70000], rate=71186.44/min
[80000], rate=71641.79/min
[90000], rate=72000.00/min
[100000], rate=73170.73/min
[110000], rate=74157.30/min
[120000], rate=75789.47/min
[130000], rate=78000.00/min
[140000], rate=79245.28/min
[150000], rate=80357.14/min
[160000], rate=82051.28/min
[170000], rate=84297.52/min
[180000], rate=85714.29/min
[190000], rate=89062.50/min
[200000], rate=91603.05/min
[210000], rate=94736.84/min
[220000], rate=97058.82/min
[230000], rate=100000.00/min
[240000], rate=102857.14/min
[250000], rate=104895.10/min
[260000], rate=101960.78/min
[270000], rate=99386.50/min
[280000], rate=97674.42/min
[290000], rate=95604.40/min
[300000], rate=94240.84/min
[310000], rate=93000.00/min
[320000], rate=91866.03/min
[330000], rate=90825.69/min
[340000], rate=89867.84/min
[350000], rate=89361.70/min
[360000], rate=89256.20/min
[370000], rate=89156.63/min
[380000], rate=89062.50/min
[390000], rate=88973.38/min
[400000], rate=89219.33/min
[410000], rate=89454.55/min
[420000], rate=89679.72/min
[430000], rate=89895.47/min
[440000], rate=90721.65/min
[450000], rate=91525.42/min
[460000], rate=92000.00/min
[470000], rate=92459.02/min
[480000], rate=91719.75/min
[490000], rate=90184.05/min
[500000], rate=88757.40/min
[510000], rate=87679.08/min
[520000], rate=86908.08/min
[530000], rate=86178.86/min
[540000], rate=85039.37/min
[550000], rate=83969.47/min
[560000], rate=83168.32/min
[570000], rate=82608.70/min
[580000], rate=82075.47/min
[590000], rate=81755.20/min
[600000], rate=81447.96/min
[610000], rate=81152.99/min
[620000], rate=80519.48/min
[630000], rate=80254.78/min
[640000], rate=80000.00/min
[650000], rate=79918.03/min
[660000], rate=79518.07/min
[670000], rate=79133.86/min
[680000], rate=78764.48/min
[690000], rate=78260.87/min
[700000], rate=77777.78/min
[710000], rate=77595.63/min
[720000], rate=77419.35/min
[730000], rate=77248.68/min
[740000], rate=77083.33/min
[750000], rate=76791.81/min
[760000], rate=76381.91/min
[770000], rate=76363.64/min
[780000], rate=76470.59/min
[790000], rate=76575.12/min
[800000], rate=76555.02/min
[810000], rate=76535.43/min
[820000], rate=76279.07/min
[830000], rate=76380.37/min
[840000], rate=76363.64/min
[850000], rate=76461.77/min
[860000], rate=76331.36/min
[870000], rate=76315.79/min
[880000], rate=76411.00/min
[890000], rate=76504.30/min
[900000], rate=76704.55/min
[910000], rate=76901.41/min
[920000], rate=76987.45/min
[930000], rate=77071.82/min
[940000], rate=77154.58/min
[950000], rate=77551.02/min
[960000], rate=77943.17/min
[970000], rate=78016.09/min
[980000], rate=76862.75/min
[990000], rate=76056.34/min
[1000000], rate=75093.87/min
[1010000], rate=74355.83/min
[1020000], rate=73913.04/min
[1030000], rate=73309.61/min
[1040000], rate=72642.61/min
[1050000], rate=72413.79/min
[1060000], rate=71864.41/min
[1070000], rate=71412.68/min
[1080000], rate=70974.81/min
[1090000], rate=70550.16/min
[1100000], rate=70287.54/min
[1110000], rate=70105.26/min
[1120000], rate=69781.93/min
[1130000], rate=69467.21/min
[1140000], rate=69160.77/min
[1150000], rate=68931.07/min
[1160000], rate=68842.73/min
[1170000], rate=68823.53/min
[1180000], rate=68938.66/min
[1190000], rate=68985.51/min
[1200000], rate=69097.89/min
[1210000], rate=69142.86/min
[1220000], rate=69318.18/min
[1230000], rate=69426.15/min
[1240000], rate=69144.98/min
[1250000], rate=68933.82/min
[1260000], rate=68915.22/min
[1270000], rate=68896.93/min
[1280000], rate=69002.70/min
[1290000], rate=69168.90/min
[1300000], rate=69271.76/min
[1310000], rate=69251.10/min
[1320000], rate=69352.01/min
[1330000], rate=69512.20/min
[1340000], rate=69731.14/min
[1350000], rate=69948.19/min
[1360000], rate=69922.88/min
[1370000], rate=69838.57/min
[1380000], rate=69755.69/min
[1390000], rate=69907.80/min
[1400000], rate=70000.00/min
[1410000], rate=69917.36/min
[1420000], rate=69836.07/min
[1430000], rate=69983.69/min
[1440000], rate=70016.21/min
[1450000], rate=70048.31/min
[1460000], rate=70023.98/min
[1470000], rate=70055.60/min
[1480000], rate=70142.18/min
[1490000], rate=70172.68/min
[1500000], rate=70093.46/min
[1510000], rate=70232.56/min
[1520000], rate=70207.85/min
[1530000], rate=70290.96/min
[1540000], rate=70266.16/min
[1550000], rate=70294.78/min
[1560000], rate=70323.07/min
[1570000], rate=70351.01/min
[1580000], rate=70378.62/min
[1590000], rate=70405.90/min
[1600000], rate=70381.23/min
[1610000], rate=70408.16/min
[1620000], rate=70332.85/min
[1630000], rate=70309.13/min
[1640000], rate=70135.42/min
[1650000], rate=70063.69/min
[1660000], rate=69894.74/min
[1670000], rate=69631.69/min
[1680000], rate=69613.26/min
[1690000], rate=69499.66/min
[1700000], rate=69387.76/min
[1710000], rate=69184.09/min
[1720000], rate=69215.29/min
[1730000], rate=69292.39/min
[1740000], rate=69368.77/min
[1750000], rate=69444.44/min
[1760000], rate=69565.22/min
[1770000], rate=69685.04/min
[1780000], rate=69849.57/min
[1790000], rate=70013.04/min
[1800000], rate=70175.44/min
[1810000], rate=70382.37/min
[1820000], rate=70588.24/min
[1830000], rate=70747.42/min
[1840000], rate=70951.16/min
[1850000], rate=71062.74/min
[1860000], rate=71173.47/min
[1870000], rate=71419.48/min
[1880000], rate=71528.22/min
[1890000], rate=71636.13/min
[1900000], rate=71788.41/min
[1910000], rate=71939.74/min
[1920000], rate=72090.11/min
[1930000], rate=72284.64/min
[1940000], rate=72253.26/min
[1950000], rate=72000.00/min
[1960000], rate=71838.73/min
[1970000], rate=71636.36/min
[1980000], rate=71437.16/min
[1990000], rate=71241.05/min
[2000000], rate=71090.05/min
[2010000], rate=70899.47/min
[2020000], rate=70753.06/min
[2030000], rate=70567.79/min
[2040000], rate=70506.91/min
[2050000], rate=70406.41/min
[2060000], rate=70307.17/min
[2070000], rate=70209.16/min
[2080000], rate=70112.36/min -building interval tree based on /tmp/nxf.fj2ZwTlOyx/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.05 min).
-mapping reads to genes
[10000], rate=120000.00/min
[20000], rate=171428.57/min
[30000], rate=150000.00/min
[40000], rate=150000.00/min
[50000], rate=157894.74/min
[60000], rate=180000.00/min
[70000], rate=182608.70/min
[80000], rate=171428.57/min
[90000], rate=180000.00/min
[100000], rate=171428.57/min
[110000], rate=173684.21/min
[120000], rate=175609.76/min
[130000], rate=181395.35/min
[140000], rate=182608.70/min
[150000], rate=176470.59/min
[160000], rate=181132.08/min
[170000], rate=175862.07/min
[180000], rate=177049.18/min
[190000], rate=180952.38/min
[200000], rate=181818.18/min
[210000], rate=180000.00/min
[220000], rate=178378.38/min
[230000], rate=179220.78/min
[240000], rate=180000.00/min
[250000], rate=178571.43/min
[260000], rate=183529.41/min
[270000], rate=160396.04/min
[280000], rate=138842.98/min
[290000], rate=124285.71/min
[300000], rate=113924.05/min
[310000], rate=105681.82/min
[320000], rate=98461.54/min
[330000], rate=93838.86/min
[340000], rate=89473.68/min
[350000], rate=85714.29/min
[360000], rate=81509.43/min
[370000], rate=77622.38/min
[380000], rate=74267.10/min
[390000], rate=72000.00/min
[400000], rate=69767.44/min
[410000], rate=68523.68/min
[420000], rate=67021.28/min
[430000], rate=64824.12/min
[440000], rate=63614.46/min
[450000], rate=62355.66/min
[460000], rate=61333.33/min
[470000], rate=60256.41/min
[480000], rate=59381.44/min
[490000], rate=58565.74/min
[500000], rate=57915.06/min
[510000], rate=57303.37/min
[520000], rate=56934.31/min
[530000], rate=56684.49/min
[540000], rate=56152.51/min
[550000], rate=55837.56/min
[560000], rate=55445.54/min
[570000], rate=55161.29/min
[580000], rate=54716.98/min
[590000], rate=54211.33/min
[600000], rate=54135.34/min
[610000], rate=54142.01/min
[620000], rate=53991.29/min
[630000], rate=53693.18/min
[640000], rate=53706.29/min
[650000], rate=53278.69/min
[660000], rate=52941.18/min
[670000], rate=52964.43/min
[680000], rate=52918.29/min
[690000], rate=52738.85/min
[700000], rate=52631.58/min
[710000], rate=52722.77/min
[720000], rate=52747.25/min
[730000], rate=52834.74/min
[740000], rate=52731.59/min
[750000], rate=52816.90/min
[760000], rate=52961.67/min
[770000], rate=53042.48/min
[780000], rate=53181.82/min
[790000], rate=53438.56/min
[800000], rate=53571.43/min
[810000], rate=53761.06/min
[820000], rate=53947.37/min
[830000], rate=54071.66/min
[840000], rate=54310.34/min
[850000], rate=54545.45/min
[860000], rate=54718.98/min
[870000], rate=55005.27/min
[880000], rate=55345.91/min
[890000], rate=55625.00/min
[900000], rate=55958.55/min
[910000], rate=56288.66/min
[920000], rate=56615.38/min
[930000], rate=56996.94/min
[940000], rate=56912.21/min
[950000], rate=56886.23/min
[960000], rate=56804.73/min
[970000], rate=56891.50/min
[980000], rate=56976.74/min
[990000], rate=57060.52/min
[1000000], rate=56980.06/min
[1010000], rate=56954.89/min
[1020000], rate=57142.86/min
[1030000], rate=57275.25/min
[1040000], rate=57142.86/min
[1050000], rate=57013.57/min
[1060000], rate=56938.23/min
[1070000], rate=56864.48/min
[1080000], rate=57042.25/min
[1090000], rate=57217.85/min
[1100000], rate=57441.25/min
[1110000], rate=57662.34/min
[1120000], rate=57881.14/min
[1130000], rate=58047.95/min
[1140000], rate=58312.02/min
[1150000], rate=58573.85/min
[1160000], rate=58783.78/min
[1170000], rate=59041.21/min
[1180000], rate=59346.19/min
[1190000], rate=59549.62/min
[1200000], rate=59800.66/min
[1210000], rate=59950.45/min
[1220000], rate=59755.10/min
[1230000], rate=59564.16/min
[1240000], rate=59424.92/min
[1250000], rate=59241.71/min
[1260000], rate=59108.68/min
[1270000], rate=58841.70/min
[1280000], rate=58715.60/min
[1290000], rate=58591.98/min
[1300000], rate=58514.63/min
[1310000], rate=58395.25/min
[1320000], rate=58321.06/min
[1330000], rate=58248.18/min
[1340000], rate=58218.68/min
[1350000], rate=58147.88/min
[1360000], rate=58119.66/min
[1370000], rate=58132.96/min
[1380000], rate=58186.93/min
[1390000], rate=58280.92/min
[1400000], rate=58373.87/min
[1410000], rate=58344.83/min
[1420000], rate=58356.16/min
[1430000], rate=58367.35/min
[1440000], rate=58417.85/min
[1450000], rate=58467.74/min
[1460000], rate=58438.96/min
[1470000], rate=58410.60/min
[1480000], rate=58536.59/min
[1490000], rate=58622.95/min
[1500000], rate=58746.74/min
[1510000], rate=58869.40/min
[1520000], rate=59029.13/min
[1530000], rate=59149.48/min
[1540000], rate=59230.77/min
[1550000], rate=59424.92/min
[1560000], rate=59617.83/min
[1570000], rate=59847.52/min
[1580000], rate=60038.00/min
[1590000], rate=60227.27/min
[1600000], rate=60453.40/min
[1610000], rate=60602.26/min
[1620000], rate=60485.38/min
[1630000], rate=60370.37/min
[1640000], rate=60220.32/min
[1650000], rate=60109.29/min
[1660000], rate=60072.38/min
[1670000], rate=60035.95/min
[1680000], rate=60000.00/min
[1690000], rate=59964.52/min
[1700000], rate=59964.73/min
[1710000], rate=59964.93/min
[1720000], rate=60000.00/min
[1730000], rate=60034.70/min
[1740000], rate=60034.50/min
[1750000], rate=60068.65/min
[1760000], rate=60102.45/min
[1770000], rate=60101.87/min
[1780000], rate=60135.14/min
[1790000], rate=60134.38/min
[1800000], rate=60167.13/min
[1810000], rate=60232.95/min
[1820000], rate=60231.66/min
[1830000], rate=60263.45/min
[1840000], rate=60360.85/min
[1850000], rate=60424.61/min
[1860000], rate=60487.80/min
[1870000], rate=60583.15/min
[1880000], rate=60677.78/min
[1890000], rate=60804.29/min
[1900000], rate=60929.98/min
[1910000], rate=61087.42/min
[1920000], rate=61244.02/min
[1930000], rate=61399.79/min
[1940000], rate=61554.73/min
[1950000], rate=61741.42/min
[1960000], rate=61927.33/min
[1970000], rate=62112.45/min
[1980000], rate=62296.80/min
[1990000], rate=62415.05/min
[2000000], rate=62532.57/min
[2010000], rate=62649.35/min
[2020000], rate=62765.41/min
[2030000], rate=62880.74/min
[2040000], rate=62995.37/min
[2050000], rate=63141.68/min
[2060000], rate=63287.25/min
[2070000], rate=63464.49/min
[2080000], rate=63641.00/min
[2090000], rate=63784.33/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.fj2ZwTlOyx/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.fj2ZwTlOyx/ctat_genome_lib_build_dir --filt_file /tmp/nxf.fj2ZwTlOyx/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.fj2ZwTlOyx/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-parsing /tmp/nxf.fj2ZwTlOyx/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.
6000000.00 reads per min processed...
12000000.00 reads per min processed...
9000000.00 reads per min processed...
8000000.00 reads per min processed...
6000000.00 reads per min processed...
6000000.00 reads per min processed...
6000000.00 reads per min processed...
6000000.00 reads per min processed...
5400000.00 reads per min processed...
5454545.45 reads per min processed...
5500000.00 reads per min processed...
5538461.54 reads per min processed...
5571428.57 reads per min processed...
5250000.00 reads per min processed...
5294117.65 reads per min processed...
5333333.33 reads per min processed...
5368421.05 reads per min processed...
5400000.00 reads per min processed...
5428571.43 reads per min processed...
5217391.30 reads per min processed...
5250000.00 reads per min processed...
5280000.00 reads per min processed...
5111111.11 reads per min processed...
5142857.14 reads per min processed...
5000000.00 reads per min processed...
5032258.06 reads per min processed...
5062500.00 reads per min processed...
4941176.47 reads per min processed...
4971428.57 reads per min processed...
5000000.00 reads per min processed...
5027027.03 reads per min processed...
5052631.58 reads per min processed...
5076923.08 reads per min processed...
4975609.76 reads per min processed...
5000000.00 reads per min processed...
5023255.81 reads per min processed...
5045454.55 reads per min processed...
5066666.67 reads per min processed...
4978723.40 reads per min processed...
5000000.00 reads per min processed...
5020408.16 reads per min processed...
5040000.00 reads per min processed...
5058823.53 reads per min processed...
5076923.08 reads per min processed...
5094339.62 reads per min processed...
5111111.11 reads per min processed...
5127272.73 reads per min processed...
5236363.64 reads per min processed...
5157894.74 reads per min processed...
5172413.79 reads per min processed...
5186440.68 reads per min processed...
5200000.00 reads per min processed...
5213114.75 reads per min processed...
5225806.45 reads per min processed...
5238095.24 reads per min processed...
5250000.00 reads per min processed...
5181818.18 reads per min processed...
5194029.85 reads per min processed...
5205882.35 reads per min processed...
5217391.30 reads per min processed...
5228571.43 reads per min processed...
5166666.67 reads per min processed...
5178082.19 reads per min processed...
5189189.19 reads per min processed...
5200000.00 reads per min processed...
5210526.32 reads per min processed...
5220779.22 reads per min processed...
5164556.96 reads per min processed...
5175000.00 reads per min processed...
5185185.19 reads per min processed...
5195121.95 reads per min processed...
5204819.28 reads per min processed...
done.
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.fj2ZwTlOyx/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.fj2ZwTlOyx/./star-fusion.preliminary/star-fusion
-parsing fusion evidence: /tmp/nxf.fj2ZwTlOyx/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.fj2ZwTlOyx/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.fj2ZwTlOyx/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.fj2ZwTlOyx/659_cRB-T1-TRNA-1_B23WHTKLT4_1.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.fj2ZwTlOyx/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.fj2ZwTlOyx/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.fj2ZwTlOyx/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -278314.389466
EM: Round [1] log likelihood: -278138.676166
EM: Round [2] log likelihood: -278076.335161
EM: Round [3] log likelihood: -278047.103728
EM: Round [4] log likelihood: -278031.704255
EM: Round [5] log likelihood: -278023.061155
EM: Round [6] log likelihood: -278017.971655
EM: Round [7] log likelihood: -278014.837485
EM: Round [8] log likelihood: -278012.821550
EM: Round [9] log likelihood: -278011.470110
EM: Round [10] log likelihood: -278010.529036
EM: Round [11] log likelihood: -278009.851129
EM: Round [12] log likelihood: -278009.348167
EM: Round [13] log likelihood: -278008.965443
EM: Round [14] log likelihood: -278008.667889
EM: Round [15] log likelihood: -278008.432299
EM: Round [16] log likelihood: -278008.242859
EM: Round [17] log likelihood: -278008.088490
EM: Round [18] log likelihood: -278007.961242
EM: Round [19] log likelihood: -278007.855287
EM: Round [20] log likelihood: -278007.766268
EM: Round [21] log likelihood: -278007.690876
EM: Round [22] log likelihood: -278007.626560
EM: Round [23] log likelihood: -278007.571330
EM: Round [24] log likelihood: -278007.523615
EM: Round [25] log likelihood: -278007.482162
EM: Round [26] log likelihood: -278007.445963
EM: Round [27] log likelihood: -278007.414202
EM: Round [28] log likelihood: -278007.386211
EM: Round [29] log likelihood: -278007.361441
EM: Round [30] log likelihood: -278007.339436
EM: Round [31] log likelihood: -278007.319819
EM: Round [32] log likelihood: -278007.302270
EM: Round [33] log likelihood: -278007.286524
EM: Round [34] log likelihood: -278007.272354
EM: Round [35] log likelihood: -278007.259566
EM: Round [36] log likelihood: -278007.247997
EM: Round [37] log likelihood: -278007.237505
EM: Round [38] log likelihood: -278007.227969
EM: Round [39] log likelihood: -278007.219283
EM: Round [40] log likelihood: -278007.211355
EM: Round [41] log likelihood: -278007.204106
EM: Round [42] log likelihood: -278007.197467
EM: Round [43] log likelihood: -278007.191375
EM: Round [44] log likelihood: -278007.185777
EM: Round [45] log likelihood: -278007.180625
EM: Round [46] log likelihood: -278007.175877
EM: Round [47] log likelihood: -278007.171496
EM: Round [48] log likelihood: -278007.167448
EM: Round [49] log likelihood: -278007.163702
EM: Round [50] log likelihood: -278007.160234
EM: Round [51] log likelihood: -278007.157017
EM: Round [52] log likelihood: -278007.154032
EM: Round [53] log likelihood: -278007.151258
EM: Round [54] log likelihood: -278007.148679
EM: Round [55] log likelihood: -278007.146277
EM: Round [56] log likelihood: -278007.144039
EM: Round [57] log likelihood: -278007.141953
EM: Round [58] log likelihood: -278007.140005
EM: Round [59] log likelihood: -278007.138185
EM: Round [60] log likelihood: -278007.136483
EM: Round [61] log likelihood: -278007.134891
EM: Round [62] log likelihood: -278007.133400
EM: Round [63] log likelihood: -278007.132003
EM: Round [64] log likelihood: -278007.130693
EM: Round [65] log likelihood: -278007.129463
EM: Round [66] log likelihood: -278007.128308
EM: Round [67] log likelihood: -278007.127222
EM: Round [68] log likelihood: -278007.126201
EM: Round [69] log likelihood: -278007.125240
EM: Round [70] log likelihood: -278007.124335
EM: Round [71] log likelihood: -278007.123482
EM: Round [72] log likelihood: -278007.122678
EM: Round [73] log likelihood: -278007.121919
EM: Round [74] log likelihood: -278007.121202
EM: Round [75] log likelihood: -278007.120525
EM: Round [76] log likelihood: -278007.119885
EM: Round [77] log likelihood: -278007.119279
EM: Round [78] log likelihood: -278007.118706
EM: Round [79] log likelihood: -278007.118163
EM: Round [80] log likelihood: -278007.117649
EM: Round [81] log likelihood: -278007.117161
EM: Round [82] log likelihood: -278007.116698
EM: Round [83] log likelihood: -278007.116259
EM: Round [84] log likelihood: -278007.115842
EM: Round [85] log likelihood: -278007.115446
EM: Round [86] log likelihood: -278007.115069
EM: Round [87] log likelihood: -278007.114711
EM: Round [88] log likelihood: -278007.114370
EM: Round [89] log likelihood: -278007.114046
EM: Round [90] log likelihood: -278007.113736
EM: Round [91] log likelihood: -278007.113442
EM: Round [92] log likelihood: -278007.113161
EM: Round [93] log likelihood: -278007.112893
EM: Round [94] log likelihood: -278007.112638
EM: Round [95] log likelihood: -278007.112394
EM: Round [96] log likelihood: -278007.112161
EM: Round [97] log likelihood: -278007.111938
EM: Round [98] log likelihood: -278007.111725
EM: Round [99] log likelihood: -278007.111522
EM: Round [100] log likelihood: -278007.111327
EM: Round [101] log likelihood: -278007.111141
EM: Round [102] log likelihood: -278007.110963
EM: Round [103] log likelihood: -278007.110792
EM: Round [104] log likelihood: -278007.110629
EM: Round [105] log likelihood: -278007.110472
EM: Round [106] log likelihood: -278007.110322
EM: Round [107] log likelihood: -278007.110178
EM: Round [108] log likelihood: -278007.110040
EM: Round [109] log likelihood: -278007.109908
EM: Round [110] log likelihood: -278007.109781
EM: Round [111] log likelihood: -278007.109659
EM: Round [112] log likelihood: -278007.109542
EM: Round [113] log likelihood: -278007.109429
EM: Round [114] log likelihood: -278007.109321
EM: Round [115] log likelihood: -278007.109217
EM: Round [116] log likelihood: -278007.109117
EM: Stopping iterations at round 116 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -277137.690417
EM: Round [1] log likelihood: -277002.614862
EM: Round [2] log likelihood: -276955.537021
EM: Round [3] log likelihood: -276934.122242
EM: Round [4] log likelihood: -276923.114556
EM: Round [5] log likelihood: -276917.017033
EM: Round [6] log likelihood: -276913.439259
EM: Round [7] log likelihood: -276911.230630
EM: Round [8] log likelihood: -276909.802541
EM: Round [9] log likelihood: -276908.839754
EM: Round [10] log likelihood: -276908.166352
EM: Round [11] log likelihood: -276907.680224
EM: Round [12] log likelihood: -276907.319783
EM: Round [13] log likelihood: -276907.046485
EM: Round [14] log likelihood: -276906.835353
EM: Round [15] log likelihood: -276906.669663
EM: Round [16] log likelihood: -276906.537889
EM: Round [17] log likelihood: -276906.431876
EM: Round [18] log likelihood: -276906.345722
EM: Round [19] log likelihood: -276906.275073
EM: Round [20] log likelihood: -276906.216665
EM: Round [21] log likelihood: -276906.168013
EM: Round [22] log likelihood: -276906.127203
EM: Round [23] log likelihood: -276906.092747
EM: Round [24] log likelihood: -276906.063475
EM: Round [25] log likelihood: -276906.038460
EM: Round [26] log likelihood: -276906.016964
EM: Round [27] log likelihood: -276905.998391
EM: Round [28] log likelihood: -276905.982262
EM: Round [29] log likelihood: -276905.968185
EM: Round [30] log likelihood: -276905.955843
EM: Round [31] log likelihood: -276905.944971
EM: Round [32] log likelihood: -276905.935353
EM: Round [33] log likelihood: -276905.926808
EM: Round [34] log likelihood: -276905.919188
EM: Round [35] log likelihood: -276905.912366
EM: Round [36] log likelihood: -276905.906237
EM: Round [37] log likelihood: -276905.900711
EM: Round [38] log likelihood: -276905.895713
EM: Round [39] log likelihood: -276905.891178
EM: Round [40] log likelihood: -276905.887052
EM: Round [41] log likelihood: -276905.883287
EM: Round [42] log likelihood: -276905.879843
EM: Round [43] log likelihood: -276905.876685
EM: Round [44] log likelihood: -276905.873782
EM: Round [45] log likelihood: -276905.871108
EM: Round [46] log likelihood: -276905.868639
EM: Round [47] log likelihood: -276905.866357
EM: Round [48] log likelihood: -276905.864242
EM: Round [49] log likelihood: -276905.862279
EM: Round [50] log likelihood: -276905.860454
EM: Round [51] log likelihood: -276905.858755
EM: Round [52] log likelihood: -276905.857171
EM: Round [53] log likelihood: -276905.855692
EM: Round [54] log likelihood: -276905.854310
EM: Round [55] log likelihood: -276905.853016
EM: Round [56] log likelihood: -276905.851803
EM: Round [57] log likelihood: -276905.850665
EM: Round [58] log likelihood: -276905.849596
EM: Round [59] log likelihood: -276905.848591
EM: Round [60] log likelihood: -276905.847646
EM: Round [61] log likelihood: -276905.846755
EM: Round [62] log likelihood: -276905.845915
EM: Round [63] log likelihood: -276905.845123
EM: Round [64] log likelihood: -276905.844374
EM: Round [65] log likelihood: -276905.843667
EM: Round [66] log likelihood: -276905.842998
EM: Round [67] log likelihood: -276905.842364
EM: Round [68] log likelihood: -276905.841764
EM: Round [69] log likelihood: -276905.841195
EM: Round [70] log likelihood: -276905.840655
EM: Round [71] log likelihood: -276905.840142
EM: Round [72] log likelihood: -276905.839655
EM: Round [73] log likelihood: -276905.839192
EM: Round [74] log likelihood: -276905.838752
EM: Round [75] log likelihood: -276905.838333
EM: Round [76] log likelihood: -276905.837934
EM: Round [77] log likelihood: -276905.837554
EM: Round [78] log likelihood: -276905.837191
EM: Round [79] log likelihood: -276905.836845
EM: Round [80] log likelihood: -276905.836515
EM: Round [81] log likelihood: -276905.836200
EM: Round [82] log likelihood: -276905.835899
EM: Round [83] log likelihood: -276905.835611
EM: Round [84] log likelihood: -276905.835336
EM: Round [85] log likelihood: -276905.835073
EM: Round [86] log likelihood: -276905.834821
EM: Round [87] log likelihood: -276905.834579
EM: Round [88] log likelihood: -276905.834348
EM: Round [89] log likelihood: -276905.834127
EM: Round [90] log likelihood: -276905.833914
EM: Round [91] log likelihood: -276905.833711
EM: Round [92] log likelihood: -276905.833515
EM: Round [93] log likelihood: -276905.833328
EM: Round [94] log likelihood: -276905.833148
EM: Round [95] log likelihood: -276905.832975
EM: Round [96] log likelihood: -276905.832809
EM: Round [97] log likelihood: -276905.832649
EM: Round [98] log likelihood: -276905.832496
EM: Round [99] log likelihood: -276905.832348
EM: Round [100] log likelihood: -276905.832206
EM: Round [101] log likelihood: -276905.832070
EM: Round [102] log likelihood: -276905.831939
EM: Round [103] log likelihood: -276905.831812
EM: Round [104] log likelihood: -276905.831690
EM: Round [105] log likelihood: -276905.831573
EM: Round [106] log likelihood: -276905.831460
EM: Round [107] log likelihood: -276905.831351
EM: Round [108] log likelihood: -276905.831246
EM: Round [109] log likelihood: -276905.831145
EM: Round [110] log likelihood: -276905.831048
EM: Stopping iterations at round 110 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.fj2ZwTlOyx/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.fj2ZwTlOyx/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.fj2ZwTlOyx/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.fj2ZwTlOyx/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.fj2ZwTlOyx/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.fj2ZwTlOyx/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.fj2ZwTlOyx/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20
CMD: cp /tmp/nxf.fj2ZwTlOyx/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.fj2ZwTlOyx/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.fj2ZwTlOyx/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.fj2ZwTlOyx/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.fj2ZwTlOyx/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.fj2ZwTlOyx/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.fj2ZwTlOyx/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 243765595 > /tmp/nxf.fj2ZwTlOyx/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.fj2ZwTlOyx/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.fj2ZwTlOyx/ctat_genome_lib_build_dir > /tmp/nxf.fj2ZwTlOyx/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.fj2ZwTlOyx/ctat_genome_lib_build_dir --annotate /tmp/nxf.fj2ZwTlOyx/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.fj2ZwTlOyx/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.fj2ZwTlOyx/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.fj2ZwTlOyx/ctat_genome_lib_build_dir
-done, see /tmp/nxf.fj2ZwTlOyx/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.fj2ZwTlOyx/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.fj2ZwTlOyx/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 1805, filtered: 12506)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.fj2ZwTlOyx/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.fj2ZwTlOyx/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.fj2ZwTlOyx/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000278399.1]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000180747.15]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000172965.17]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000259098.1]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000224086.6]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000224086.6]
WARNING, no entry stored in dbm for [ENSG00000234715.2]
WARNING, no entry stored in dbm for [ENSG00000226049.3]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000213880.3]
WARNING, no entry stored in dbm for [ENSG00000213862.4]
WARNING, no entry stored in dbm for [ENSG00000276758.1]
WARNING, no entry stored in dbm for [ENSG00000248568.1]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000272848.2]
WARNING, no entry stored in dbm for [ENSG00000128438.10]
WARNING, no entry stored in dbm for [ENSG00000227769.7]
WARNING, no entry stored in dbm for [ENSG00000275642.1]
WARNING, no entry stored in dbm for [ENSG00000205534.6]
WARNING, no entry stored in dbm for [ENSG00000250869.2]
WARNING, no entry stored in dbm for [ENSG00000261526.2]
WARNING, no entry stored in dbm for [ENSG00000277458.1]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000228303.1]
WARNING, no entry stored in dbm for [ENSG00000229932.3]
WARNING, no entry stored in dbm for [ENSG00000225292.2]
WARNING, no entry stored in dbm for [ENSG00000242435.1]
WARNING, no entry stored in dbm for [ENSG00000078319.10]
WARNING, no entry stored in dbm for [ENSG00000232894.1]
WARNING, no entry stored in dbm for [ENSG00000284977.2]
WARNING, no entry stored in dbm for [ENSG00000286630.1]
WARNING, no entry stored in dbm for [ENSG00000255986.6]
WARNING, no entry stored in dbm for [ENSG00000286215.1]
WARNING, no entry stored in dbm for [ENSG00000235703.6]
WARNING, no entry stored in dbm for [ENSG00000226240.2]
WARNING, no entry stored in dbm for [ENSG00000268153.5]
WARNING, no entry stored in dbm for [ENSG00000233930.4]
WARNING, no entry stored in dbm for [ENSG00000286948.1]
WARNING, no entry stored in dbm for [ENSG00000164669.13]
WARNING, no entry stored in dbm for [ENSG00000226002.1]
WARNING, no entry stored in dbm for [ENSG00000231711.2]
WARNING, no entry stored in dbm for [ENSG00000123201.14]
WARNING, no entry stored in dbm for [ENSG00000280832.1]
WARNING, no entry stored in dbm for [ENSG00000279516.2]
WARNING, no entry stored in dbm for [ENSG00000234919.1]
WARNING, no entry stored in dbm for [ENSG00000230630.5]
WARNING, no entry stored in dbm for [ENSG00000224533.4]
WARNING, no entry stored in dbm for [ENSG00000225393.1]
WARNING, no entry stored in dbm for [ENSG00000288029.1]
WARNING, no entry stored in dbm for [ENSG00000213057.5]
WARNING, no entry stored in dbm for [ENSG00000266373.1]
WARNING, no entry stored in dbm for [ENSG00000232993.1]
WARNING, no entry stored in dbm for [ENSG00000286409.1]
WARNING, no entry stored in dbm for [ENSG00000244471.6]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000282057.1]
WARNING, no entry stored in dbm for [ENSG00000254610.3]
WARNING, no entry stored in dbm for [ENSG00000273819.1]
WARNING, no entry stored in dbm for [ENSG00000267698.1]
WARNING, no entry stored in dbm for [ENSG00000248958.2]
WARNING, no entry stored in dbm for [ENSG00000236491.1]
WARNING, no entry stored in dbm for [ENSG00000245750.10]
WARNING, no entry stored in dbm for [ENSG00000239893.2]
WARNING, no entry stored in dbm for [ENSG00000225594.1]
WARNING, no entry stored in dbm for [ENSG00000261659.2]
WARNING, no entry stored in dbm for [ENSG00000219665.8]
WARNING, no entry stored in dbm for [ENSG00000219565.2]
WARNING, no entry stored in dbm for [ENSG00000253661.2]
WARNING, no entry stored in dbm for [ENSG00000177410.13]
WARNING, no entry stored in dbm for [ENSG00000250802.7]
WARNING, no entry stored in dbm for [ENSG00000237331.1]
WARNING, no entry stored in dbm for [ENSG00000221953.5]
WARNING, no entry stored in dbm for [ENSG00000272758.6]
WARNING, no entry stored in dbm for [ENSG00000272758.6]
WARNING, no entry stored in dbm for [ENSG00000285887.1]
WARNING, no entry stored in dbm for [ENSG00000215403.1]
WARNING, no entry stored in dbm for [ENSG00000237523.2]
WARNING, no entry stored in dbm for [ENSG00000282458.1]
WARNING, no entry stored in dbm for [ENSG00000146556.14]
WARNING, no entry stored in dbm for [ENSG00000237499.7]
WARNING, no entry stored in dbm for [ENSG00000275110.1]
WARNING, no entry stored in dbm for [ENSG00000243981.4]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000228639.8]
WARNING, no entry stored in dbm for [ENSG00000242435.1]
WARNING, no entry stored in dbm for [ENSG00000078319.10]
WARNING, no entry stored in dbm for [ENSG00000267339.7]
WARNING, no entry stored in dbm for [ENSG00000228889.7]
WARNING, no entry stored in dbm for [ENSG00000273694.1]
WARNING, no entry stored in dbm for [ENSG00000278591.1]
WARNING, no entry stored in dbm for [ENSG00000275219.1]
WARNING, no entry stored in dbm for [ENSG00000274452.1]
WARNING, no entry stored in dbm for [ENSG00000274062.1]
WARNING, no entry stored in dbm for [ENSG00000274862.1]
WARNING, no entry stored in dbm for [ENSG00000278774.1]
WARNING, no entry stored in dbm for [ENSG00000277903.1]
WARNING, no entry stored in dbm for [ENSG00000276596.1]
WARNING, no entry stored in dbm for [ENSG00000278048.1]
WARNING, no entry stored in dbm for [ENSG00000274432.1]
WARNING, no entry stored in dbm for [ENSG00000273709.1]
WARNING, no entry stored in dbm for [ENSG00000275616.1]
WARNING, no entry stored in dbm for [ENSG00000283519.1]
WARNING, no entry stored in dbm for [ENSG00000213862.4]
WARNING, no entry stored in dbm for [ENSG00000250788.1]
WARNING, no entry stored in dbm for [ENSG00000237298.10]
WARNING, no entry stored in dbm for [ENSG00000255875.2]
WARNING, no entry stored in dbm for [ENSG00000228775.8]
WARNING, no entry stored in dbm for [ENSG00000205790.1]
WARNING, no entry stored in dbm for [ENSG00000243695.1]
WARNING, no entry stored in dbm for [ENSG00000256817.1]
WARNING, no entry stored in dbm for [ENSG00000234782.3]
WARNING, no entry stored in dbm for [ENSG00000170919.16]
WARNING, no entry stored in dbm for [ENSG00000238005.4]
WARNING, no entry stored in dbm for [ENSG00000189223.15]
WARNING, no entry stored in dbm for [ENSG00000231728.5]
WARNING, no entry stored in dbm for [ENSG00000281649.2]
WARNING, no entry stored in dbm for [ENSG00000225793.3]
WARNING, no entry stored in dbm for [ENSG00000263400.8]
WARNING, no entry stored in dbm for [ENSG00000237590.1]
WARNING, no entry stored in dbm for [ENSG00000231439.4]
WARNING, no entry stored in dbm for [ENSG00000281896.1]
WARNING, no entry stored in dbm for [ENSG00000218020.3]
WARNING, no entry stored in dbm for [ENSG00000269235.2]
WARNING, no entry stored in dbm for [ENSG00000243004.6]
WARNING, no entry stored in dbm for [ENSG00000245008.4]
WARNING, no entry stored in dbm for [ENSG00000288062.1]
WARNING, no entry stored in dbm for [ENSG00000271978.1]
WARNING, no entry stored in dbm for [ENSG00000259654.1]
WARNING, no entry stored in dbm for [ENSG00000205583.13]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000238061.2]
WARNING, no entry stored in dbm for [ENSG00000234072.1]
WARNING, no entry stored in dbm for [ENSG00000224479.6]
WARNING, no entry stored in dbm for [ENSG00000269893.8]
WARNING, no entry stored in dbm for [ENSG00000224078.15]
WARNING, no entry stored in dbm for [ENSG00000286619.1]
WARNING, no entry stored in dbm for [ENSG00000247157.7]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000260727.2]
WARNING, no entry stored in dbm for [ENSG00000260727.2]
WARNING, no entry stored in dbm for [ENSG00000224081.9]
WARNING, no entry stored in dbm for [ENSG00000224081.9]
WARNING, no entry stored in dbm for [ENSG00000286953.1]
WARNING, no entry stored in dbm for [ENSG00000215790.8]
WARNING, no entry stored in dbm for [ENSG00000240877.3]
WARNING, no entry stored in dbm for [ENSG00000276213.1]
WARNING, no entry stored in dbm for [ENSG00000247081.8]
WARNING, no entry stored in dbm for [ENSG00000251504.1]
WARNING, no entry stored in dbm for [ENSG00000287868.1]
WARNING, no entry stored in dbm for [ENSG00000220494.4]
WARNING, no entry stored in dbm for [ENSG00000274461.2]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000276805.2]
WARNING, no entry stored in dbm for [ENSG00000287411.1]
WARNING, no entry stored in dbm for [ENSG00000267040.6]
WARNING, no entry stored in dbm for [ENSG00000280033.1]
WARNING, no entry stored in dbm for [ENSG00000267612.1]
WARNING, no entry stored in dbm for [ENSG00000275071.1]
WARNING, no entry stored in dbm for [ENSG00000249859.12]
WARNING, no entry stored in dbm for [ENSG00000248702.1]
WARNING, no entry stored in dbm for [ENSG00000254534.1]
WARNING, no entry stored in dbm for [ENSG00000230116.1]
WARNING, no entry stored in dbm for [ENSG00000227361.1]
WARNING, no entry stored in dbm for [ENSG00000242163.1]
WARNING, no entry stored in dbm for [ENSG00000239521.9]
WARNING, no entry stored in dbm for [ENSG00000242248.2]
WARNING, no entry stored in dbm for [ENSG00000229414.2]
WARNING, no entry stored in dbm for [ENSG00000224683.1]
WARNING, no entry stored in dbm for [ENSG00000228007.1]
WARNING, no entry stored in dbm for [ENSG00000223671.2]
WARNING, no entry stored in dbm for [ENSG00000255286.2]
WARNING, no entry stored in dbm for [ENSG00000239686.1]
WARNING, no entry stored in dbm for [ENSG00000239671.1]
WARNING, no entry stored in dbm for [ENSG00000223508.5]
WARNING, no entry stored in dbm for [ENSG00000226407.1]
WARNING, no entry stored in dbm for [ENSG00000239199.1]
WARNING, no entry stored in dbm for [ENSG00000243181.2]
WARNING, no entry stored in dbm for [ENSG00000234524.1]
WARNING, no entry stored in dbm for [ENSG00000234524.1]
WARNING, no entry stored in dbm for [ENSG00000229824.1]
WARNING, no entry stored in dbm for [ENSG00000232174.3]
WARNING, no entry stored in dbm for [ENSG00000207359.1]
WARNING, no entry stored in dbm for [ENSG00000223107.1]
WARNING, no entry stored in dbm for [ENSG00000223336.1]
WARNING, no entry stored in dbm for [ENSG00000253099.1]
WARNING, no entry stored in dbm for [ENSG00000222414.1]
WARNING, no entry stored in dbm for [ENSG00000252847.1]
WARNING, no entry stored in dbm for [ENSG00000222788.1]
WARNING, no entry stored in dbm for [ENSG00000252018.1]
WARNING, no entry stored in dbm for [ENSG00000222328.1]
WARNING, no entry stored in dbm for [ENSG00000222644.1]
WARNING, no entry stored in dbm for [ENSG00000274585.1]
WARNING, no entry stored in dbm for [ENSG00000241529.3]
WARNING, no entry stored in dbm for [ENSG00000264618.2]
WARNING, no entry stored in dbm for [ENSG00000239899.3]
WARNING, no entry stored in dbm for [ENSG00000239899.3]
WARNING, no entry stored in dbm for [ENSG00000226969.1]
WARNING, no entry stored in dbm for [ENSG00000234795.10]
WARNING, no entry stored in dbm for [ENSG00000236948.2]
WARNING, no entry stored in dbm for [ENSG00000241018.1]
WARNING, no entry stored in dbm for [ENSG00000249558.1]
WARNING, no entry stored in dbm for [ENSG00000224687.2]
WARNING, no entry stored in dbm for [ENSG00000224687.2]
WARNING, no entry stored in dbm for [ENSG00000279696.1]
WARNING, no entry stored in dbm for [ENSG00000244257.5]
WARNING, no entry stored in dbm for [ENSG00000203739.4]
WARNING, no entry stored in dbm for [ENSG00000213985.4]
WARNING, no entry stored in dbm for [ENSG00000244257.5]
WARNING, no entry stored in dbm for [ENSG00000259444.1]
WARNING, no entry stored in dbm for [ENSG00000224924.7]
WARNING, no entry stored in dbm for [ENSG00000180259.10]
WARNING, no entry stored in dbm for [ENSG00000099725.14]
WARNING, no entry stored in dbm for [ENSG00000239893.2]
WARNING, no entry stored in dbm for [ENSG00000099725.14]
WARNING, no entry stored in dbm for [ENSG00000203739.4]
WARNING, no entry stored in dbm for [ENSG00000224986.2]
WARNING, no entry stored in dbm for [ENSG00000214975.4]
WARNING, no entry stored in dbm for [ENSG00000233013.10]
WARNING, no entry stored in dbm for [ENSG00000205578.6]
WARNING, no entry stored in dbm for [ENSG00000230305.2]
WARNING, no entry stored in dbm for [ENSG00000224477.5]
WARNING, no entry stored in dbm for [ENSG00000240935.6]
WARNING, no entry stored in dbm for [ENSG00000266931.2]
WARNING, no entry stored in dbm for [ENSG00000245904.4]
WARNING, no entry stored in dbm for [ENSG00000229522.1]
WARNING, no entry stored in dbm for [ENSG00000228666.1]
WARNING, no entry stored in dbm for [ENSG00000250251.6]
WARNING, no entry stored in dbm for [ENSG00000227827.3]
WARNING, no entry stored in dbm for [ENSG00000236382.1]
WARNING, no entry stored in dbm for [ENSG00000225856.2]
WARNING, no entry stored in dbm for [ENSG00000274605.2]
WARNING, no entry stored in dbm for [ENSG00000225937.3]
WARNING, no entry stored in dbm for [ENSG00000189223.15]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000267270.6]
WARNING, no entry stored in dbm for [ENSG00000226055.2]
WARNING, no entry stored in dbm for [ENSG00000237298.10]
WARNING, no entry stored in dbm for [ENSG00000238152.2]
WARNING, no entry stored in dbm for [ENSG00000284707.2]
WARNING, no entry stored in dbm for [ENSG00000287611.1]
WARNING, no entry stored in dbm for [ENSG00000225484.7]
WARNING, no entry stored in dbm for [ENSG00000205913.7]
WARNING, no entry stored in dbm for [ENSG00000228835.1]
WARNING, no entry stored in dbm for [ENSG00000214353.8]
WARNING, no entry stored in dbm for [ENSG00000223864.1]
WARNING, no entry stored in dbm for [ENSG00000232406.7]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000198496.12]
WARNING, no entry stored in dbm for [ENSG00000261971.8]
WARNING, no entry stored in dbm for [ENSG00000284740.1]
WARNING, no entry stored in dbm for [ENSG00000228323.2]
WARNING, no entry stored in dbm for [ENSG00000235531.11]
WARNING, no entry stored in dbm for [ENSG00000224236.3]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000270074.1]
WARNING, no entry stored in dbm for [ENSG00000283408.2]
WARNING, no entry stored in dbm for [ENSG00000218537.1]
WARNING, no entry stored in dbm for [ENSG00000244625.7]
WARNING, no entry stored in dbm for [ENSG00000266931.2]
WARNING, no entry stored in dbm for [ENSG00000233861.1]
WARNING, no entry stored in dbm for [ENSG00000234931.1]
WARNING, no entry stored in dbm for [ENSG00000231312.7]
WARNING, no entry stored in dbm for [ENSG00000275374.1]
WARNING, no entry stored in dbm for [ENSG00000197744.5]
WARNING, no entry stored in dbm for [ENSG00000172460.17]
WARNING, no entry stored in dbm for [ENSG00000248323.7]
WARNING, no entry stored in dbm for [ENSG00000241472.7]
WARNING, no entry stored in dbm for [ENSG00000254815.6]
WARNING, no entry stored in dbm for [ENSG00000229663.1]
WARNING, no entry stored in dbm for [ENSG00000251513.2]
WARNING, no entry stored in dbm for [ENSG00000271736.2]
WARNING, no entry stored in dbm for [ENSG00000241288.8]
WARNING, no entry stored in dbm for [ENSG00000241288.8]
WARNING, no entry stored in dbm for [ENSG00000256422.6]
WARNING, no entry stored in dbm for [ENSG00000248510.2]
WARNING, no entry stored in dbm for [ENSG00000261175.6]
WARNING, no entry stored in dbm for [ENSG00000223387.6]
WARNING, no entry stored in dbm for [ENSG00000254101.7]
WARNING, no entry stored in dbm for [ENSG00000234663.7]
WARNING, no entry stored in dbm for [ENSG00000225285.1]
WARNING, no entry stored in dbm for [ENSG00000279082.4]
WARNING, no entry stored in dbm for [ENSG00000233008.6]
WARNING, no entry stored in dbm for [ENSG00000279579.3]
WARNING, no entry stored in dbm for [ENSG00000226686.8]
WARNING, no entry stored in dbm for [ENSG00000234323.8]
WARNING, no entry stored in dbm for [ENSG00000229723.1]
WARNING, no entry stored in dbm for [ENSG00000232077.2]
WARNING, no entry stored in dbm for [ENSG00000249267.7]
WARNING, no entry stored in dbm for [ENSG00000223546.7]
WARNING, no entry stored in dbm for [ENSG00000224514.3]
WARNING, no entry stored in dbm for [ENSG00000179219.5]
WARNING, no entry stored in dbm for [ENSG00000165121.11]
WARNING, no entry stored in dbm for [ENSG00000273851.1]
WARNING, no entry stored in dbm for [ENSG00000271680.1]
WARNING, no entry stored in dbm for [ENSG00000214417.4]
WARNING, no entry stored in dbm for [ENSG00000135502.19]
WARNING, no entry stored in dbm for [ENSG00000239569.3]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000267325.2]
WARNING, no entry stored in dbm for [ENSG00000237978.6]
WARNING, no entry stored in dbm for [ENSG00000254332.1]
WARNING, no entry stored in dbm for [ENSG00000203709.12]
WARNING, no entry stored in dbm for [ENSG00000223382.5]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000226216.1]
WARNING, no entry stored in dbm for [ENSG00000188451.8]
WARNING, no entry stored in dbm for [ENSG00000241449.6]
WARNING, no entry stored in dbm for [ENSG00000270864.1]
WARNING, no entry stored in dbm for [ENSG00000261834.2]
WARNING, no entry stored in dbm for [ENSG00000259917.1]
WARNING, no entry stored in dbm for [ENSG00000259228.1]
WARNING, no entry stored in dbm for [ENSG00000199568.1]
WARNING, no entry stored in dbm for [ENSG00000279066.1]
WARNING, no entry stored in dbm for [ENSG00000278621.1]
WARNING, no entry stored in dbm for [ENSG00000248205.1]
WARNING, no entry stored in dbm for [ENSG00000236319.2]
WARNING, no entry stored in dbm for [ENSG00000234945.8]
WARNING, no entry stored in dbm for [ENSG00000225872.4]
WARNING, no entry stored in dbm for [ENSG00000229964.1]
WARNING, no entry stored in dbm for [ENSG00000229608.1]
WARNING, no entry stored in dbm for [ENSG00000166104.15]
WARNING, no entry stored in dbm for [ENSG00000166104.15]
WARNING, no entry stored in dbm for [ENSG00000250903.9]
WARNING, no entry stored in dbm for [ENSG00000173077.16]
WARNING, no entry stored in dbm for [ENSG00000214331.8]
WARNING, no entry stored in dbm for [ENSG00000253948.2]
WARNING, no entry stored in dbm for [ENSG00000254349.6]
WARNING, no entry stored in dbm for [ENSG00000259091.1]
WARNING, no entry stored in dbm for [ENSG00000178596.10]
WARNING, no entry stored in dbm for [ENSG00000250982.2]
WARNING, no entry stored in dbm for [ENSG00000238197.6]
WARNING, no entry stored in dbm for [ENSG00000258562.2]
WARNING, no entry stored in dbm for [ENSG00000149531.15]
WARNING, no entry stored in dbm for [ENSG00000277737.3]
WARNING, no entry stored in dbm for [ENSG00000237238.3]
WARNING, no entry stored in dbm for [ENSG00000203650.9]
WARNING, no entry stored in dbm for [ENSG00000244097.1]
WARNING, no entry stored in dbm for [ENSG00000281896.1]
WARNING, no entry stored in dbm for [ENSG00000251600.8]
WARNING, no entry stored in dbm for [ENSG00000235768.1]
WARNING, no entry stored in dbm for [ENSG00000226777.7]
WARNING, no entry stored in dbm for [ENSG00000236438.7]
WARNING, no entry stored in dbm for [ENSG00000234709.2]
WARNING, no entry stored in dbm for [ENSG00000237372.4]
WARNING, no entry stored in dbm for [ENSG00000264673.1]
WARNING, no entry stored in dbm for [ENSG00000226688.7]
WARNING, no entry stored in dbm for [ENSG00000233969.2]
WARNING, no entry stored in dbm for [ENSG00000229262.1]
WARNING, no entry stored in dbm for [ENSG00000251504.1]
WARNING, no entry stored in dbm for [ENSG00000230424.1]
WARNING, no entry stored in dbm for [ENSG00000204623.9]
WARNING, no entry stored in dbm for [ENSG00000224101.1]
WARNING, no entry stored in dbm for [ENSG00000230239.1]
WARNING, no entry stored in dbm for [ENSG00000226648.2]
WARNING, no entry stored in dbm for [ENSG00000245750.10]
WARNING, no entry stored in dbm for [ENSG00000268093.1]
WARNING, no entry stored in dbm for [ENSG00000255092.1]
WARNING, no entry stored in dbm for [ENSG00000254275.6]
WARNING, no entry stored in dbm for [ENSG00000288091.1]
WARNING, no entry stored in dbm for [ENSG00000228876.4]
WARNING, no entry stored in dbm for [ENSG00000260577.2]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000207044.1]
WARNING, no entry stored in dbm for [ENSG00000267241.2]
WARNING, no entry stored in dbm for [ENSG00000255159.1]
WARNING, no entry stored in dbm for [ENSG00000231906.1]
WARNING, no entry stored in dbm for [ENSG00000278932.4]
WARNING, no entry stored in dbm for [ENSG00000177406.5]
WARNING, no entry stored in dbm for [ENSG00000255624.3]
WARNING, no entry stored in dbm for [ENSG00000240216.7]
WARNING, no entry stored in dbm for [ENSG00000257998.1]
WARNING, no entry stored in dbm for [ENSG00000230630.5]
WARNING, no entry stored in dbm for [ENSG00000283541.1]
WARNING, no entry stored in dbm for [ENSG00000243406.6]
WARNING, no entry stored in dbm for [ENSG00000205334.2]
WARNING, no entry stored in dbm for [ENSG00000269891.2]
WARNING, no entry stored in dbm for [ENSG00000235472.1]
WARNING, no entry stored in dbm for [ENSG00000154874.15]
WARNING, no entry stored in dbm for [ENSG00000154874.15]
WARNING, no entry stored in dbm for [ENSG00000254166.3]
WARNING, no entry stored in dbm for [ENSG00000226800.5]
WARNING, no entry stored in dbm for [ENSG00000286257.2]
WARNING, no entry stored in dbm for [ENSG00000237265.6]
WARNING, no entry stored in dbm for [ENSG00000219088.1]
WARNING, no entry stored in dbm for [ENSG00000234235.1]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000266213.1]
WARNING, no entry stored in dbm for [ENSG00000233967.7]
WARNING, no entry stored in dbm for [ENSG00000257433.6]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000233485.1]
WARNING, no entry stored in dbm for [ENSG00000267080.6]
WARNING, no entry stored in dbm for [ENSG00000251548.1]
WARNING, no entry stored in dbm for [ENSG00000264322.2]
WARNING, no entry stored in dbm for [ENSG00000242170.3]
WARNING, no entry stored in dbm for [ENSG00000239820.3]
WARNING, no entry stored in dbm for [ENSG00000263988.2]
WARNING, no entry stored in dbm for [ENSG00000280302.1]
WARNING, no entry stored in dbm for [ENSG00000237654.6]
WARNING, no entry stored in dbm for [ENSG00000250230.3]
WARNING, no entry stored in dbm for [ENSG00000287917.1]
WARNING, no entry stored in dbm for [ENSG00000247137.9]
WARNING, no entry stored in dbm for [ENSG00000231991.4]
WARNING, no entry stored in dbm for [ENSG00000230006.7]
WARNING, no entry stored in dbm for [ENSG00000233673.7]
WARNING, no entry stored in dbm for [ENSG00000234182.2]
WARNING, no entry stored in dbm for [ENSG00000232063.2]
WARNING, no entry stored in dbm for [ENSG00000230021.10]
WARNING, no entry stored in dbm for [ENSG00000231963.1]
WARNING, no entry stored in dbm for [ENSG00000227278.1]
WARNING, no entry stored in dbm for [ENSG00000277020.4]
WARNING, no entry stored in dbm for [ENSG00000225087.2]
WARNING, no entry stored in dbm for [ENSG00000217801.10]
WARNING, no entry stored in dbm for [ENSG00000250090.1]
WARNING, no entry stored in dbm for [ENSG00000280222.1]
WARNING, no entry stored in dbm for [ENSG00000205740.2]
WARNING, no entry stored in dbm for [ENSG00000227355.3]
WARNING, no entry stored in dbm for [ENSG00000248503.2]
WARNING, no entry stored in dbm for [ENSG00000286782.1]
WARNING, no entry stored in dbm for [ENSG00000287828.1]
WARNING, no entry stored in dbm for [ENSG00000177788.6]
WARNING, no entry stored in dbm for [ENSG00000230490.3]
WARNING, no entry stored in dbm for [ENSG00000244733.5]
WARNING, no entry stored in dbm for [ENSG00000286052.1]
WARNING, no entry stored in dbm for [ENSG00000286803.1]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000288543.1]
WARNING, no entry stored in dbm for [ENSG00000279175.1]
WARNING, no entry stored in dbm for [ENSG00000286324.1]
WARNING, no entry stored in dbm for [ENSG00000280434.1]
WARNING, no entry stored in dbm for [ENSG00000280011.1]
WARNING, no entry stored in dbm for [ENSG00000230912.1]
WARNING, no entry stored in dbm for [ENSG00000285887.1]
WARNING, no entry stored in dbm for [ENSG00000272848.2]
WARNING, no entry stored in dbm for [ENSG00000229700.1]
WARNING, no entry stored in dbm for [ENSG00000243744.2]
WARNING, no entry stored in dbm for [ENSG00000237770.2]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000254332.1]
WARNING, no entry stored in dbm for [ENSG00000253500.6]
WARNING, no entry stored in dbm for [ENSG00000181126.13]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000285062.1]
WARNING, no entry stored in dbm for [ENSG00000263590.2]
WARNING, no entry stored in dbm for [ENSG00000266903.2]
WARNING, no entry stored in dbm for [ENSG00000277089.4]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000275121.1]
WARNING, no entry stored in dbm for [ENSG00000279821.1]
WARNING, no entry stored in dbm for [ENSG00000233836.7]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000253181.2]
WARNING, no entry stored in dbm for [ENSG00000260911.2]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000243596.1]
WARNING, no entry stored in dbm for [ENSG00000283345.1]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000235421.1]
WARNING, no entry stored in dbm for [ENSG00000285336.1]
WARNING, no entry stored in dbm for [ENSG00000241011.1]
WARNING, no entry stored in dbm for [ENSG00000246130.1]
WARNING, no entry stored in dbm for [ENSG00000287053.1]
WARNING, no entry stored in dbm for [ENSG00000231482.3]
WARNING, no entry stored in dbm for [ENSG00000238267.1]
WARNING, no entry stored in dbm for [ENSG00000282375.1]
WARNING, no entry stored in dbm for [ENSG00000287129.1]
WARNING, no entry stored in dbm for [ENSG00000231646.6]
WARNING, no entry stored in dbm for [ENSG00000228303.1]
WARNING, no entry stored in dbm for [ENSG00000277952.1]
WARNING, no entry stored in dbm for [ENSG00000178636.8]
WARNING, no entry stored in dbm for [ENSG00000266931.2]
WARNING, no entry stored in dbm for [ENSG00000231259.5]
WARNING, no entry stored in dbm for [ENSG00000243916.1]
WARNING, no entry stored in dbm for [ENSG00000288620.1]
WARNING, no entry stored in dbm for [ENSG00000288620.1]
WARNING, no entry stored in dbm for [ENSG00000187953.10]
WARNING, no entry stored in dbm for [ENSG00000239969.5]
WARNING, no entry stored in dbm for [ENSG00000265936.1]
WARNING, no entry stored in dbm for [ENSG00000214259.3]
WARNING, no entry stored in dbm for [ENSG00000287590.1]
WARNING, no entry stored in dbm for [ENSG00000267279.2]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [ENSG00000266931.2]
WARNING, no entry stored in dbm for [ENSG00000250131.2]
WARNING, no entry stored in dbm for [ENSG00000279863.1]
WARNING, no entry stored in dbm for [ENSG00000257337.7]
WARNING, no entry stored in dbm for [ENSG00000287388.1]
WARNING, no entry stored in dbm for [ENSG00000250220.1]
WARNING, no entry stored in dbm for [ENSG00000257817.2]
WARNING, no entry stored in dbm for [ENSG00000276122.1]
WARNING, no entry stored in dbm for [ENSG00000260693.1]
WARNING, no entry stored in dbm for [ENSG00000259683.1]
WARNING, no entry stored in dbm for [ENSG00000260693.1]
WARNING, no entry stored in dbm for [ENSG00000259683.1]
WARNING, no entry stored in dbm for [ENSG00000259354.5]
WARNING, no entry stored in dbm for [ENSG00000261632.1]
WARNING, no entry stored in dbm for [ENSG00000253857.2]
WARNING, no entry stored in dbm for [ENSG00000259397.3]
WARNING, no entry stored in dbm for [ENSG00000230747.1]
WARNING, no entry stored in dbm for [ENSG00000230407.1]
WARNING, no entry stored in dbm for [ENSG00000260558.2]
WARNING, no entry stored in dbm for [ENSG00000285106.2]
WARNING, no entry stored in dbm for [ENSG00000269032.1]
WARNING, no entry stored in dbm for [ENSG00000223508.5]
WARNING, no entry stored in dbm for [ENSG00000266290.1]
WARNING, no entry stored in dbm for [ENSG00000186148.13]
WARNING, no entry stored in dbm for [ENSG00000283157.1]
WARNING, no entry stored in dbm for [ENSG00000177699.4]
WARNING, no entry stored in dbm for [ENSG00000250025.2]
WARNING, no entry stored in dbm for [ENSG00000249839.1]
WARNING, no entry stored in dbm for [ENSG00000269439.6]
WARNING, no entry stored in dbm for [ENSG00000284671.1]
WARNING, no entry stored in dbm for [ENSG00000260905.1]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000229321.2]
WARNING, no entry stored in dbm for [ENSG00000235583.2]
WARNING, no entry stored in dbm for [ENSG00000259683.1]
WARNING, no entry stored in dbm for [ENSG00000235583.2]
WARNING, no entry stored in dbm for [ENSG00000259683.1]
WARNING, no entry stored in dbm for [ENSG00000247853.2]
WARNING, no entry stored in dbm for [ENSG00000267623.3]
WARNING, no entry stored in dbm for [ENSG00000230305.2]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000241057.2]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000214870.9]
WARNING, no entry stored in dbm for [ENSG00000268163.1]
WARNING, no entry stored in dbm for [ENSG00000274705.2]
* STAR-Fusion complete. See output: /tmp/nxf.fj2ZwTlOyx/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)