File Info

Filename
fi_workdir/Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/aa/6a7631964161ae5b2eca1ed656e592/fi_workdir/Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 08 09:36:39
                             Started mapping on |	Jun 08 09:42:59
                                    Finished on |	Jun 08 10:34:07
       Mapping speed, Million of reads per hour |	264.05

                          Number of input reads |	225028134
                      Average input read length |	262
                                    UNIQUE READS:
                   Uniquely mapped reads number |	217772731
                        Uniquely mapped reads % |	96.78%
                          Average mapped length |	261.16
                       Number of splices: Total |	267314517
            Number of splices: Annotated (sjdb) |	262310602
                       Number of splices: GT/AG |	264181175
                       Number of splices: GC/AG |	1638775
                       Number of splices: AT/AC |	171834
               Number of splices: Non-canonical |	1322733
                      Mismatch rate per base, % |	0.21%
                         Deletion rate per base |	0.03%
                        Deletion average length |	2.11
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.68
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	5235446
             % of reads mapped to multiple loci |	2.33%
        Number of reads mapped to too many loci |	236302
             % of reads mapped to too many loci |	0.11%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	0
       % of reads unmapped: too many mismatches |	0.00%
            Number of reads unmapped: too short |	1583141
                 % of reads unmapped: too short |	0.70%
                Number of reads unmapped: other |	200514
                     % of reads unmapped: other |	0.09%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%