File Info

Filename
fi_workdir/Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/50/b616718d57d1db375d6e0445f5066f/fi_workdir/Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 08 10:10:30
                             Started mapping on |	Jun 08 10:17:13
                                    Finished on |	Jun 08 11:32:22
       Mapping speed, Million of reads per hour |	231.37

                          Number of input reads |	289786026
                      Average input read length |	251
                                    UNIQUE READS:
                   Uniquely mapped reads number |	274707691
                        Uniquely mapped reads % |	94.80%
                          Average mapped length |	250.59
                       Number of splices: Total |	309396149
            Number of splices: Annotated (sjdb) |	304619716
                       Number of splices: GT/AG |	305487229
                       Number of splices: GC/AG |	1983380
                       Number of splices: AT/AC |	213777
               Number of splices: Non-canonical |	1711763
                      Mismatch rate per base, % |	0.28%
                         Deletion rate per base |	0.03%
                        Deletion average length |	2.16
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.56
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	12199598
             % of reads mapped to multiple loci |	4.21%
        Number of reads mapped to too many loci |	759424
             % of reads mapped to too many loci |	0.26%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	0
       % of reads unmapped: too many mismatches |	0.00%
            Number of reads unmapped: too short |	1873670
                 % of reads unmapped: too short |	0.65%
                Number of reads unmapped: other |	245643
                     % of reads unmapped: other |	0.08%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%