Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2a/097509c42729116c87df4f0c94ab44/tih_rna_sample_00090_B23WHTKLT4_2_R1.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ec/8f90b2610d0cfe9c1a34f4bb9ab28c/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ec/8f90b2610d0cfe9c1a34f4bb9ab28c/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2a/097509c42729116c87df4f0c94ab44/tih_rna_sample_00090_B23WHTKLT4_2_R2.fastq.gz
==> STAGING COMPLETE (4 inputs)

ls: *.fail.fastq.gz: No such file or directory
ls: *.merged.fastq.gz: No such file or directory