.command.log - Workdir - NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (659_ciJ-T1-TRNA-1_B23WHTKLT4_1)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2d/3bbac4a9af743e87713eb8cab6901e/.command.log
Size: 704 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (659_ciJ-T1-TRNA-1_B23WHTKLT4_1)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/be/114c979df55f22fa90556e75669f24/659_ciJ-T1-TRNA-1_B23WHTKLT4_1.md.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2d/3bbac4a9af743e87713eb8cab6901e/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2d/3bbac4a9af743e87713eb8cab6901e/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/be/114c979df55f22fa90556e75669f24/659_ciJ-T1-TRNA-1_B23WHTKLT4_1.md.bai
==> STAGING COMPLETE (4 inputs)

+ seqtool saturation -region chr20 659_ciJ-T1-TRNA-1_B23WHTKLT4_1.md.bam
[W::hts_idx_load3] The index file is older than the data file: 659_ciJ-T1-TRNA-1_B23WHTKLT4_1.md.bai