-ctat genome lib [/tmp/nxf.6fau5xL6fL/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.6fau5xL6fL/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.6fau5xL6fL/./star-fusion.preliminary
-sample contains 205803538 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.6fau5xL6fL/ctat_genome_lib_build_dir  -J /tmp/nxf.6fau5xL6fL/659_dts-T1-TRNA-1_B23WHTKLT4_1.Chimeric.out.junction  -O /tmp/nxf.6fau5xL6fL/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.6fau5xL6fL/659_dts-T1-TRNA-1_B23WHTKLT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.6fau5xL6fL/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

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[1740000], rate=49175.69/min -building interval tree based on /tmp/nxf.6fau5xL6fL/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

[10000], rate=37500.00/min 
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[1720000], rate=45785.27/min 
[1730000], rate=45767.20/min 
[1740000], rate=45769.40/min -building interval tree based on /tmp/nxf.6fau5xL6fL/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

[10000], rate=85714.29/min 
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[1710000], rate=42750.00/min 
[1720000], rate=42679.90/min 
[1730000], rate=42523.56/min 
[1740000], rate=42404.55/min -building interval tree based on /tmp/nxf.6fau5xL6fL/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

[10000], rate=120000.00/min 
[20000], rate=133333.33/min 
[30000], rate=163636.36/min 
[40000], rate=200000.00/min 
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[100000], rate=166666.67/min 
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[180000], rate=57142.86/min 
[190000], rate=48717.95/min 
[200000], rate=44280.44/min 
[210000], rate=40384.62/min 
[220000], rate=37822.35/min 
[230000], rate=36604.77/min 
[240000], rate=33962.26/min 
[250000], rate=32397.41/min 
[260000], rate=30291.26/min 
[270000], rate=29136.69/min 
[280000], rate=27450.98/min 
[290000], rate=27187.50/min 
[300000], rate=26509.57/min 
[310000], rate=25833.33/min 
[320000], rate=25702.81/min 
[330000], rate=25515.46/min 
[340000], rate=25247.52/min 
[350000], rate=25149.70/min 
[360000], rate=24913.49/min 
[370000], rate=24694.10/min 
[380000], rate=23799.58/min 
[390000], rate=23853.21/min 
[400000], rate=23928.22/min 
[410000], rate=24023.44/min 
[420000], rate=24137.93/min 
[430000], rate=24248.12/min 
[440000], rate=24331.80/min 
[450000], rate=24346.26/min 
[460000], rate=24533.33/min 
[470000], rate=24650.35/min 
[480000], rate=24849.01/min 
[490000], rate=25063.94/min 
[500000], rate=25273.80/min 
[510000], rate=25478.77/min 
[520000], rate=25700.16/min 
[530000], rate=25895.77/min 
[540000], rate=26086.96/min 
[550000], rate=26232.11/min 
[560000], rate=26415.09/min 
[570000], rate=26594.09/min 
[580000], rate=26769.23/min 
[590000], rate=26737.16/min 
[600000], rate=26706.23/min 
[610000], rate=26540.97/min 
[620000], rate=26704.95/min 
[630000], rate=26884.78/min 
[640000], rate=27099.51/min 
[650000], rate=27310.92/min 
[660000], rate=27519.11/min 
[670000], rate=27762.43/min 
[680000], rate=27983.54/min 
[690000], rate=28240.11/min 
[700000], rate=28493.89/min 
[710000], rate=28744.94/min 
[720000], rate=28993.29/min 
[730000], rate=29258.52/min 
[740000], rate=29521.28/min 
[750000], rate=29624.75/min 
[760000], rate=29571.98/min 
[770000], rate=29634.38/min 
[780000], rate=29601.52/min 
[790000], rate=29440.99/min 
[800000], rate=29484.03/min 
[810000], rate=29616.09/min 
[820000], rate=29692.21/min 
[830000], rate=29874.03/min 
[840000], rate=30035.76/min 
[850000], rate=30231.18/min 
[860000], rate=30210.77/min 
[870000], rate=30243.34/min 
[880000], rate=30414.75/min 
[890000], rate=30619.27/min 
[900000], rate=30839.52/min 
[910000], rate=31040.36/min 
[920000], rate=31239.39/min 
[930000], rate=31436.62/min 
[940000], rate=31632.08/min 
[950000], rate=31843.58/min 
[960000], rate=32053.42/min 
[970000], rate=32225.91/min 
[980000], rate=32272.23/min 
[990000], rate=32494.53/min 
[1000000], rate=32715.38/min 
[1010000], rate=32756.76/min 
[1020000], rate=32075.47/min 
[1030000], rate=31227.89/min 
[1040000], rate=30952.38/min 
[1050000], rate=30897.50/min 
[1060000], rate=30828.89/min 
[1070000], rate=30791.37/min 
[1080000], rate=30681.82/min 
[1090000], rate=30193.91/min 
[1100000], rate=30013.64/min 
[1110000], rate=29946.04/min 
[1120000], rate=29800.44/min 
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[1140000], rate=29895.10/min 
[1150000], rate=29960.92/min 
[1160000], rate=30025.88/min 
[1170000], rate=30128.76/min 
[1180000], rate=30256.41/min 
[1190000], rate=30331.35/min 
[1200000], rate=30392.57/min 
[1210000], rate=30453.02/min 
[1220000], rate=30538.17/min 
[1230000], rate=30635.12/min 
[1240000], rate=30743.80/min 
[1250000], rate=30851.50/min 
[1260000], rate=30958.23/min 
[1270000], rate=31076.67/min 
[1280000], rate=31194.15/min 
[1290000], rate=31222.27/min 
[1300000], rate=31363.09/min 
[1310000], rate=31503.01/min 
[1320000], rate=31642.03/min 
[1330000], rate=31792.83/min 
[1340000], rate=31955.48/min 
[1350000], rate=32117.37/min 
[1360000], rate=32265.72/min 
[1370000], rate=32413.25/min 
[1380000], rate=32331.12/min 
[1390000], rate=32200.77/min 
[1400000], rate=32159.26/min 
[1410000], rate=32106.26/min 
[1420000], rate=32078.31/min 
[1430000], rate=32086.76/min 
[1440000], rate=32083.18/min 
[1450000], rate=32079.65/min 
[1460000], rate=32099.67/min 
[1470000], rate=32131.15/min 
[1480000], rate=32162.26/min 
[1490000], rate=32204.61/min 
[1500000], rate=32051.28/min 
[1510000], rate=31811.80/min 
[1520000], rate=31655.68/min 
[1530000], rate=31557.24/min 
[1540000], rate=31622.18/min 
[1550000], rate=31697.34/min 
[1560000], rate=31782.68/min 
[1570000], rate=31824.32/min 
[1580000], rate=31748.16/min 
[1590000], rate=31673.31/min 
[1600000], rate=31610.14/min 
[1610000], rate=31713.72/min 
[1620000], rate=31837.54/min 
[1630000], rate=31971.23/min 
[1640000], rate=32114.88/min 
[1650000], rate=32247.56/min 
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[1680000], rate=32568.66/min 
[1690000], rate=32667.53/min 
[1700000], rate=32776.35/min 
[1710000], rate=32895.16/min 
[1720000], rate=33013.44/min 
[1730000], rate=33131.18/min 
[1740000], rate=33269.60/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.6fau5xL6fL/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.6fau5xL6fL/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.6fau5xL6fL/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.6fau5xL6fL/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.6fau5xL6fL/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 6000000.00 reads per min processed...  
 4000000.00 reads per min processed...  
 3600000.00 reads per min processed...  
 3428571.43 reads per min processed...  
 3333333.33 reads per min processed...  
 3272727.27 reads per min processed...  
 3500000.00 reads per min processed...  
 3428571.43 reads per min processed...  
 3375000.00 reads per min processed...  
 3333333.33 reads per min processed...  
 3300000.00 reads per min processed...  
 3272727.27 reads per min processed...  
 3250000.00 reads per min processed...  
 3360000.00 reads per min processed...  
 3333333.33 reads per min processed...  
 3200000.00 reads per min processed...  
 3187500.00 reads per min processed...  
 3085714.29 reads per min processed...  
 3081081.08 reads per min processed...  
 3076923.08 reads per min processed...  
 3000000.00 reads per min processed...  
 3000000.00 reads per min processed...  
 3000000.00 reads per min processed...  
 3000000.00 reads per min processed...  
 3000000.00 reads per min processed...  
 3000000.00 reads per min processed...  
 3000000.00 reads per min processed...  
 3000000.00 reads per min processed...  
 3000000.00 reads per min processed...  
 3050847.46 reads per min processed...  
 3049180.33 reads per min processed...  
 3047619.05 reads per min processed...  
 3046153.85 reads per min processed...  
 3044776.12 reads per min processed...  
 3043478.26 reads per min processed...  
 3085714.29 reads per min processed...  
 3126760.56 reads per min processed...  
 3123287.67 reads per min processed...  
 3120000.00 reads per min processed...  
 3116883.12 reads per min processed...  
 3113924.05 reads per min processed...  
 3111111.11 reads per min processed...  
 3108433.73 reads per min processed...  
 3142857.14 reads per min processed...  
 3176470.59 reads per min processed...  
 3172413.79 reads per min processed...  
 3168539.33 reads per min processed...  
 3200000.00 reads per min processed...  
 3195652.17 reads per min processed...  
 3191489.36 reads per min processed...  
 3187500.00 reads per min processed...  
 3183673.47 reads per min processed...  
 3180000.00 reads per min processed...  
 3176470.59 reads per min processed...  
 3203883.50 reads per min processed...  
 3200000.00 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.6fau5xL6fL/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.6fau5xL6fL/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.6fau5xL6fL/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.6fau5xL6fL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.6fau5xL6fL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.6fau5xL6fL/659_dts-T1-TRNA-1_B23WHTKLT4_1.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.6fau5xL6fL/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.6fau5xL6fL/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.6fau5xL6fL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -282151.899906
EM: Round [1] log likelihood: -281956.653913
EM: Round [2] log likelihood: -281895.739960
EM: Round [3] log likelihood: -281868.416512
EM: Round [4] log likelihood: -281854.307584
EM: Round [5] log likelihood: -281846.399240
EM: Round [6] log likelihood: -281841.683264
EM: Round [7] log likelihood: -281838.712953
EM: Round [8] log likelihood: -281836.746243
EM: Round [9] log likelihood: -281835.384328
EM: Round [10] log likelihood: -281834.403604
EM: Round [11] log likelihood: -281833.673392
EM: Round [12] log likelihood: -281833.114177
EM: Round [13] log likelihood: -281832.675676
EM: Round [14] log likelihood: -281832.324939
EM: Round [15] log likelihood: -281832.039664
EM: Round [16] log likelihood: -281831.804309
EM: Round [17] log likelihood: -281831.607760
EM: Round [18] log likelihood: -281831.441891
EM: Round [19] log likelihood: -281831.300634
EM: Round [20] log likelihood: -281831.179381
EM: Round [21] log likelihood: -281831.074571
EM: Round [22] log likelihood: -281830.983419
EM: Round [23] log likelihood: -281830.903712
EM: Round [24] log likelihood: -281830.833675
EM: Round [25] log likelihood: -281830.771867
EM: Round [26] log likelihood: -281830.717108
EM: Round [27] log likelihood: -281830.668423
EM: Round [28] log likelihood: -281830.624997
EM: Round [29] log likelihood: -281830.586149
EM: Round [30] log likelihood: -281830.551302
EM: Round [31] log likelihood: -281830.519966
EM: Round [32] log likelihood: -281830.491722
EM: Round [33] log likelihood: -281830.466210
EM: Round [34] log likelihood: -281830.443119
EM: Round [35] log likelihood: -281830.422181
EM: Round [36] log likelihood: -281830.403160
EM: Round [37] log likelihood: -281830.385852
EM: Round [38] log likelihood: -281830.370077
EM: Round [39] log likelihood: -281830.355679
EM: Round [40] log likelihood: -281830.342517
EM: Round [41] log likelihood: -281830.330470
EM: Round [42] log likelihood: -281830.319429
EM: Round [43] log likelihood: -281830.309296
EM: Round [44] log likelihood: -281830.299986
EM: Round [45] log likelihood: -281830.291423
EM: Round [46] log likelihood: -281830.283537
EM: Round [47] log likelihood: -281830.276267
EM: Round [48] log likelihood: -281830.269559
EM: Round [49] log likelihood: -281830.263363
EM: Round [50] log likelihood: -281830.257634
EM: Round [51] log likelihood: -281830.252332
EM: Round [52] log likelihood: -281830.247421
EM: Round [53] log likelihood: -281830.242869
EM: Round [54] log likelihood: -281830.238645
EM: Round [55] log likelihood: -281830.234723
EM: Round [56] log likelihood: -281830.231079
EM: Round [57] log likelihood: -281830.227690
EM: Round [58] log likelihood: -281830.224536
EM: Round [59] log likelihood: -281830.221599
EM: Round [60] log likelihood: -281830.218863
EM: Round [61] log likelihood: -281830.216311
EM: Round [62] log likelihood: -281830.213930
EM: Round [63] log likelihood: -281830.211707
EM: Round [64] log likelihood: -281830.209631
EM: Round [65] log likelihood: -281830.207690
EM: Round [66] log likelihood: -281830.205876
EM: Round [67] log likelihood: -281830.204177
EM: Round [68] log likelihood: -281830.202588
EM: Round [69] log likelihood: -281830.201099
EM: Round [70] log likelihood: -281830.199704
EM: Round [71] log likelihood: -281830.198396
EM: Round [72] log likelihood: -281830.197169
EM: Round [73] log likelihood: -281830.196018
EM: Round [74] log likelihood: -281830.194938
EM: Round [75] log likelihood: -281830.193923
EM: Round [76] log likelihood: -281830.192970
EM: Round [77] log likelihood: -281830.192074
EM: Round [78] log likelihood: -281830.191232
EM: Round [79] log likelihood: -281830.190440
EM: Round [80] log likelihood: -281830.189694
EM: Round [81] log likelihood: -281830.188992
EM: Round [82] log likelihood: -281830.188332
EM: Round [83] log likelihood: -281830.187710
EM: Round [84] log likelihood: -281830.187123
EM: Round [85] log likelihood: -281830.186571
EM: Round [86] log likelihood: -281830.186050
EM: Round [87] log likelihood: -281830.185559
EM: Round [88] log likelihood: -281830.185095
EM: Round [89] log likelihood: -281830.184658
EM: Round [90] log likelihood: -281830.184245
EM: Round [91] log likelihood: -281830.183855
EM: Round [92] log likelihood: -281830.183487
EM: Round [93] log likelihood: -281830.183139
EM: Round [94] log likelihood: -281830.182810
EM: Round [95] log likelihood: -281830.182499
EM: Round [96] log likelihood: -281830.182206
EM: Round [97] log likelihood: -281830.181928
EM: Round [98] log likelihood: -281830.181665
EM: Round [99] log likelihood: -281830.181416
EM: Round [100] log likelihood: -281830.181180
EM: Round [101] log likelihood: -281830.180957
EM: Round [102] log likelihood: -281830.180746
EM: Round [103] log likelihood: -281830.180546
EM: Round [104] log likelihood: -281830.180356
EM: Round [105] log likelihood: -281830.180176
EM: Round [106] log likelihood: -281830.180006
EM: Round [107] log likelihood: -281830.179844
EM: Round [108] log likelihood: -281830.179690
EM: Round [109] log likelihood: -281830.179545
EM: Round [110] log likelihood: -281830.179407
EM: Round [111] log likelihood: -281830.179275
EM: Round [112] log likelihood: -281830.179151
EM: Round [113] log likelihood: -281830.179032
EM: Round [114] log likelihood: -281830.178920
EM: Round [115] log likelihood: -281830.178813
EM: Round [116] log likelihood: -281830.178711
EM: Round [117] log likelihood: -281830.178615
EM: Stopping iterations at round 117 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -280869.175151
EM: Round [1] log likelihood: -280720.613733
EM: Round [2] log likelihood: -280674.413682
EM: Round [3] log likelihood: -280653.863836
EM: Round [4] log likelihood: -280643.387768
EM: Round [5] log likelihood: -280637.622587
EM: Round [6] log likelihood: -280634.265715
EM: Round [7] log likelihood: -280632.211255
EM: Round [8] log likelihood: -280630.894162
EM: Round [9] log likelihood: -280630.012795
EM: Round [10] log likelihood: -280629.399704
EM: Round [11] log likelihood: -280628.958336
EM: Round [12] log likelihood: -280628.630937
EM: Round [13] log likelihood: -280628.381718
EM: Round [14] log likelihood: -280628.187757
EM: Round [15] log likelihood: -280628.033914
EM: Round [16] log likelihood: -280627.909906
EM: Round [17] log likelihood: -280627.808562
EM: Round [18] log likelihood: -280627.724766
EM: Round [19] log likelihood: -280627.654786
EM: Round [20] log likelihood: -280627.595846
EM: Round [21] log likelihood: -280627.545845
EM: Round [22] log likelihood: -280627.503166
EM: Round [23] log likelihood: -280627.466543
EM: Round [24] log likelihood: -280627.434974
EM: Round [25] log likelihood: -280627.407655
EM: Round [26] log likelihood: -280627.383934
EM: Round [27] log likelihood: -280627.363276
EM: Round [28] log likelihood: -280627.345238
EM: Round [29] log likelihood: -280627.329452
EM: Round [30] log likelihood: -280627.315608
EM: Round [31] log likelihood: -280627.303446
EM: Round [32] log likelihood: -280627.292742
EM: Round [33] log likelihood: -280627.283308
EM: Round [34] log likelihood: -280627.274982
EM: Round [35] log likelihood: -280627.267623
EM: Round [36] log likelihood: -280627.261112
EM: Round [37] log likelihood: -280627.255343
EM: Round [38] log likelihood: -280627.250228
EM: Round [39] log likelihood: -280627.245686
EM: Round [40] log likelihood: -280627.241650
EM: Round [41] log likelihood: -280627.238059
EM: Round [42] log likelihood: -280627.234862
EM: Round [43] log likelihood: -280627.232012
EM: Round [44] log likelihood: -280627.229470
EM: Round [45] log likelihood: -280627.227199
EM: Round [46] log likelihood: -280627.225169
EM: Round [47] log likelihood: -280627.223353
EM: Round [48] log likelihood: -280627.221726
EM: Round [49] log likelihood: -280627.220267
EM: Round [50] log likelihood: -280627.218958
EM: Round [51] log likelihood: -280627.217782
EM: Round [52] log likelihood: -280627.216723
EM: Round [53] log likelihood: -280627.215770
EM: Round [54] log likelihood: -280627.214911
EM: Round [55] log likelihood: -280627.214135
EM: Round [56] log likelihood: -280627.213434
EM: Round [57] log likelihood: -280627.212800
EM: Round [58] log likelihood: -280627.212225
EM: Round [59] log likelihood: -280627.211703
EM: Round [60] log likelihood: -280627.211229
EM: Round [61] log likelihood: -280627.210797
EM: Round [62] log likelihood: -280627.210404
EM: Round [63] log likelihood: -280627.210045
EM: Round [64] log likelihood: -280627.209717
EM: Round [65] log likelihood: -280627.209416
EM: Round [66] log likelihood: -280627.209140
EM: Round [67] log likelihood: -280627.208886
EM: Round [68] log likelihood: -280627.208653
EM: Round [69] log likelihood: -280627.208437
EM: Round [70] log likelihood: -280627.208238
EM: Round [71] log likelihood: -280627.208054
EM: Round [72] log likelihood: -280627.207883
EM: Round [73] log likelihood: -280627.207724
EM: Round [74] log likelihood: -280627.207576
EM: Round [75] log likelihood: -280627.207438
EM: Round [76] log likelihood: -280627.207309
EM: Round [77] log likelihood: -280627.207189
EM: Round [78] log likelihood: -280627.207075
EM: Round [79] log likelihood: -280627.206969
EM: Round [80] log likelihood: -280627.206869
EM: Round [81] log likelihood: -280627.206774
EM: Stopping iterations at round 81 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.6fau5xL6fL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.6fau5xL6fL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.6fau5xL6fL/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.6fau5xL6fL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.6fau5xL6fL/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.6fau5xL6fL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.6fau5xL6fL/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.6fau5xL6fL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.6fau5xL6fL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.6fau5xL6fL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.6fau5xL6fL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.6fau5xL6fL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.6fau5xL6fL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.6fau5xL6fL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 205803538 > /tmp/nxf.6fau5xL6fL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.6fau5xL6fL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.6fau5xL6fL/ctat_genome_lib_build_dir > /tmp/nxf.6fau5xL6fL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.6fau5xL6fL/ctat_genome_lib_build_dir --annotate /tmp/nxf.6fau5xL6fL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.6fau5xL6fL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.6fau5xL6fL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.6fau5xL6fL/ctat_genome_lib_build_dir
-done, see /tmp/nxf.6fau5xL6fL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.6fau5xL6fL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.6fau5xL6fL/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 2615, filtered: 12589)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.6fau5xL6fL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.6fau5xL6fL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.6fau5xL6fL/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [IGH.g@-ext]
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WARNING, no entry stored in dbm for [ENSG00000273356.1]
WARNING, no entry stored in dbm for [ENSG00000281849.3]
WARNING, no entry stored in dbm for [ENSG00000260967.1]
WARNING, no entry stored in dbm for [ENSG00000271978.1]
WARNING, no entry stored in dbm for [ENSG00000263142.5]
WARNING, no entry stored in dbm for [ENSG00000266504.1]
WARNING, no entry stored in dbm for [ENSG00000247199.5]
WARNING, no entry stored in dbm for [ENSG00000237685.1]
WARNING, no entry stored in dbm for [ENSG00000213904.9]
WARNING, no entry stored in dbm for [ENSG00000236432.8]
WARNING, no entry stored in dbm for [ENSG00000236039.3]
WARNING, no entry stored in dbm for [ENSG00000234476.3]
WARNING, no entry stored in dbm for [ENSG00000215244.3]
WARNING, no entry stored in dbm for [ENSG00000224965.1]
WARNING, no entry stored in dbm for [ENSG00000258819.2]
WARNING, no entry stored in dbm for [ENSG00000261064.1]
WARNING, no entry stored in dbm for [ENSG00000261811.2]
WARNING, no entry stored in dbm for [ENSG00000224153.3]
WARNING, no entry stored in dbm for [ENSG00000223956.3]
WARNING, no entry stored in dbm for [ENSG00000198685.4]
WARNING, no entry stored in dbm for [ENSG00000205786.8]
WARNING, no entry stored in dbm for [ENSG00000234766.2]
WARNING, no entry stored in dbm for [ENSG00000236204.6]
WARNING, no entry stored in dbm for [ENSG00000228262.10]
WARNING, no entry stored in dbm for [ENSG00000229891.2]
WARNING, no entry stored in dbm for [ENSG00000260924.2]
WARNING, no entry stored in dbm for [ENSG00000281912.1]
WARNING, no entry stored in dbm for [ENSG00000281912.1]
WARNING, no entry stored in dbm for [ENSG00000233621.2]
WARNING, no entry stored in dbm for [ENSG00000251504.1]
WARNING, no entry stored in dbm for [ENSG00000230724.9]
WARNING, no entry stored in dbm for [ENSG00000282572.2]
WARNING, no entry stored in dbm for [ENSG00000235703.6]
WARNING, no entry stored in dbm for [ENSG00000235703.6]
WARNING, no entry stored in dbm for [ENSG00000241769.7]
WARNING, no entry stored in dbm for [ENSG00000225269.3]
WARNING, no entry stored in dbm for [ENSG00000268658.5]
WARNING, no entry stored in dbm for [ENSG00000226240.2]
WARNING, no entry stored in dbm for [ENSG00000179219.5]
WARNING, no entry stored in dbm for [ENSG00000253314.7]
WARNING, no entry stored in dbm for [ENSG00000231721.7]
WARNING, no entry stored in dbm for [ENSG00000237057.3]
WARNING, no entry stored in dbm for [ENSG00000230979.3]
WARNING, no entry stored in dbm for [ENSG00000235513.2]
WARNING, no entry stored in dbm for [ENSG00000233930.4]
WARNING, no entry stored in dbm for [ENSG00000286948.1]
WARNING, no entry stored in dbm for [ENSG00000278214.1]
WARNING, no entry stored in dbm for [ENSG00000196796.5]
WARNING, no entry stored in dbm for [ENSG00000250686.2]
WARNING, no entry stored in dbm for [ENSG00000270641.1]
WARNING, no entry stored in dbm for [ENSG00000286808.1]
WARNING, no entry stored in dbm for [ENSG00000197536.11]
WARNING, no entry stored in dbm for [ENSG00000236778.8]
WARNING, no entry stored in dbm for [ENSG00000267938.1]
WARNING, no entry stored in dbm for [ENSG00000246859.3]
WARNING, no entry stored in dbm for [ENSG00000211459.2]
WARNING, no entry stored in dbm for [ENSG00000237424.1]
WARNING, no entry stored in dbm for [ENSG00000227733.10]
WARNING, no entry stored in dbm for [ENSG00000238057.10]
WARNING, no entry stored in dbm for [ENSG00000233429.9]
WARNING, no entry stored in dbm for [ENSG00000223509.8]
WARNING, no entry stored in dbm for [ENSG00000257621.8]
WARNING, no entry stored in dbm for [ENSG00000231991.4]
WARNING, no entry stored in dbm for [ENSG00000207637.1]
WARNING, no entry stored in dbm for [ENSG00000258667.2]
WARNING, no entry stored in dbm for [ENSG00000279333.1]
WARNING, no entry stored in dbm for [ENSG00000279066.1]
WARNING, no entry stored in dbm for [ENSG00000268621.6]
WARNING, no entry stored in dbm for [ENSG00000276550.4]
WARNING, no entry stored in dbm for [ENSG00000276550.4]
WARNING, no entry stored in dbm for [ENSG00000230606.11]
WARNING, no entry stored in dbm for [ENSG00000206337.12]
WARNING, no entry stored in dbm for [ENSG00000271860.7]
WARNING, no entry stored in dbm for [ENSG00000275374.1]
WARNING, no entry stored in dbm for [ENSG00000225795.1]
WARNING, no entry stored in dbm for [ENSG00000248205.1]
WARNING, no entry stored in dbm for [ENSG00000265541.1]
WARNING, no entry stored in dbm for [ENSG00000215097.3]
WARNING, no entry stored in dbm for [ENSG00000227038.3]
WARNING, no entry stored in dbm for [ENSG00000230189.7]
WARNING, no entry stored in dbm for [ENSG00000226002.1]
WARNING, no entry stored in dbm for [ENSG00000227113.2]
WARNING, no entry stored in dbm for [ENSG00000272556.2]
WARNING, no entry stored in dbm for [ENSG00000224316.1]
WARNING, no entry stored in dbm for [ENSG00000272779.1]
WARNING, no entry stored in dbm for [ENSG00000200224.2]
WARNING, no entry stored in dbm for [ENSG00000207204.1]
WARNING, no entry stored in dbm for [ENSG00000202350.1]
WARNING, no entry stored in dbm for [ENSG00000285638.1]
WARNING, no entry stored in dbm for [ENSG00000214433.4]
WARNING, no entry stored in dbm for [ENSG00000223705.9]
WARNING, no entry stored in dbm for [ENSG00000166104.15]
WARNING, no entry stored in dbm for [ENSG00000166104.15]
WARNING, no entry stored in dbm for [ENSG00000259143.1]
WARNING, no entry stored in dbm for [ENSG00000234741.8]
WARNING, no entry stored in dbm for [ENSG00000237238.3]
WARNING, no entry stored in dbm for [ENSG00000234975.6]
WARNING, no entry stored in dbm for [ENSG00000218213.1]
WARNING, no entry stored in dbm for [ENSG00000198468.9]
WARNING, no entry stored in dbm for [ENSG00000176826.15]
WARNING, no entry stored in dbm for [ENSG00000270194.1]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [ENSG00000244026.6]
WARNING, no entry stored in dbm for [ENSG00000226711.7]
WARNING, no entry stored in dbm for [ENSG00000272459.1]
WARNING, no entry stored in dbm for [ENSG00000277146.1]
WARNING, no entry stored in dbm for [ENSG00000273344.1]
WARNING, no entry stored in dbm for [ENSG00000204603.7]
WARNING, no entry stored in dbm for [ENSG00000259465.2]
WARNING, no entry stored in dbm for [ENSG00000278921.2]
WARNING, no entry stored in dbm for [ENSG00000204623.9]
WARNING, no entry stored in dbm for [ENSG00000230239.1]
WARNING, no entry stored in dbm for [ENSG00000239405.1]
WARNING, no entry stored in dbm for [ENSG00000260073.2]
WARNING, no entry stored in dbm for [ENSG00000243701.7]
WARNING, no entry stored in dbm for [ENSG00000243701.7]
WARNING, no entry stored in dbm for [ENSG00000170919.16]
WARNING, no entry stored in dbm for [ENSG00000170919.16]
WARNING, no entry stored in dbm for [ENSG00000170919.16]
WARNING, no entry stored in dbm for [ENSG00000170919.16]
WARNING, no entry stored in dbm for [ENSG00000170919.16]
WARNING, no entry stored in dbm for [ENSG00000230666.5]
WARNING, no entry stored in dbm for [ENSG00000176584.18]
WARNING, no entry stored in dbm for [ENSG00000234637.1]
WARNING, no entry stored in dbm for [ENSG00000271162.1]
WARNING, no entry stored in dbm for [ENSG00000282057.1]
WARNING, no entry stored in dbm for [ENSG00000214331.8]
WARNING, no entry stored in dbm for [ENSG00000233622.3]
WARNING, no entry stored in dbm for [ENSG00000276077.4]
WARNING, no entry stored in dbm for [ENSG00000261564.1]
WARNING, no entry stored in dbm for [ENSG00000271711.1]
WARNING, no entry stored in dbm for [ENSG00000276710.4]
WARNING, no entry stored in dbm for [ENSG00000245694.10]
WARNING, no entry stored in dbm for [ENSG00000271382.1]
WARNING, no entry stored in dbm for [ENSG00000284740.1]
WARNING, no entry stored in dbm for [ENSG00000240216.7]
WARNING, no entry stored in dbm for [ENSG00000249738.10]
WARNING, no entry stored in dbm for [ENSG00000261801.6]
WARNING, no entry stored in dbm for [ENSG00000258278.2]
WARNING, no entry stored in dbm for [ENSG00000280184.2]
WARNING, no entry stored in dbm for [ENSG00000235033.7]
WARNING, no entry stored in dbm for [ENSG00000242070.1]
WARNING, no entry stored in dbm for [ENSG00000231992.1]
WARNING, no entry stored in dbm for [ENSG00000223960.7]
WARNING, no entry stored in dbm for [ENSG00000243389.1]
WARNING, no entry stored in dbm for [ENSG00000224187.1]
WARNING, no entry stored in dbm for [ENSG00000222826.1]
WARNING, no entry stored in dbm for [ENSG00000186082.9]
WARNING, no entry stored in dbm for [ENSG00000286383.1]
WARNING, no entry stored in dbm for [ENSG00000269779.1]
WARNING, no entry stored in dbm for [ENSG00000269779.1]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000197214.5]
WARNING, no entry stored in dbm for [ENSG00000200156.1]
WARNING, no entry stored in dbm for [ENSG00000236671.9]
WARNING, no entry stored in dbm for [ENSG00000177553.6]
WARNING, no entry stored in dbm for [ENSG00000230303.6]
WARNING, no entry stored in dbm for [ENSG00000224750.6]
WARNING, no entry stored in dbm for [ENSG00000285417.1]
WARNING, no entry stored in dbm for [ENSG00000263647.1]
WARNING, no entry stored in dbm for [ENSG00000220771.2]
WARNING, no entry stored in dbm for [ENSG00000270025.2]
WARNING, no entry stored in dbm for [ENSG00000243289.1]
WARNING, no entry stored in dbm for [ENSG00000286156.1]
WARNING, no entry stored in dbm for [ENSG00000204177.10]
WARNING, no entry stored in dbm for [ENSG00000204177.10]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000261096.1]
WARNING, no entry stored in dbm for [ENSG00000281849.3]
WARNING, no entry stored in dbm for [ENSG00000247081.8]
WARNING, no entry stored in dbm for [ENSG00000205583.13]
WARNING, no entry stored in dbm for [ENSG00000187904.3]
WARNING, no entry stored in dbm for [ENSG00000235572.3]
WARNING, no entry stored in dbm for [ENSG00000223794.1]
WARNING, no entry stored in dbm for [ENSG00000215580.11]
WARNING, no entry stored in dbm for [ENSG00000257252.6]
WARNING, no entry stored in dbm for [ENSG00000235919.4]
WARNING, no entry stored in dbm for [ENSG00000244198.7]
WARNING, no entry stored in dbm for [ENSG00000235613.2]
WARNING, no entry stored in dbm for [ENSG00000226835.3]
WARNING, no entry stored in dbm for [ENSG00000226835.3]
WARNING, no entry stored in dbm for [ENSG00000266828.2]
WARNING, no entry stored in dbm for [ENSG00000266268.5]
WARNING, no entry stored in dbm for [ENSG00000286975.1]
WARNING, no entry stored in dbm for [ENSG00000254590.1]
WARNING, no entry stored in dbm for [ENSG00000287934.1]
WARNING, no entry stored in dbm for [ENSG00000287934.1]
WARNING, no entry stored in dbm for [ENSG00000287934.1]
WARNING, no entry stored in dbm for [ENSG00000287934.1]
WARNING, no entry stored in dbm for [ENSG00000267199.1]
WARNING, no entry stored in dbm for [ENSG00000226043.2]
WARNING, no entry stored in dbm for [ENSG00000234509.1]
WARNING, no entry stored in dbm for [ENSG00000276710.4]
WARNING, no entry stored in dbm for [ENSG00000248994.2]
WARNING, no entry stored in dbm for [ENSG00000250334.6]
WARNING, no entry stored in dbm for [ENSG00000230006.7]
WARNING, no entry stored in dbm for [ENSG00000230006.7]
WARNING, no entry stored in dbm for [ENSG00000272750.1]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000234489.1]
WARNING, no entry stored in dbm for [ENSG00000235673.1]
WARNING, no entry stored in dbm for [ENSG00000286724.1]
WARNING, no entry stored in dbm for [ENSG00000273599.1]
WARNING, no entry stored in dbm for [ENSG00000231964.1]
WARNING, no entry stored in dbm for [ENSG00000236413.2]
WARNING, no entry stored in dbm for [ENSG00000284740.1]
WARNING, no entry stored in dbm for [ENSG00000232576.2]
WARNING, no entry stored in dbm for [ENSG00000273443.1]
WARNING, no entry stored in dbm for [ENSG00000227278.1]
WARNING, no entry stored in dbm for [ENSG00000287356.1]
WARNING, no entry stored in dbm for [ENSG00000237461.2]
WARNING, no entry stored in dbm for [ENSG00000226149.6]
WARNING, no entry stored in dbm for [ENSG00000204790.9]
WARNING, no entry stored in dbm for [ENSG00000285424.1]
WARNING, no entry stored in dbm for [ENSG00000285907.1]
WARNING, no entry stored in dbm for [ENSG00000224307.2]
WARNING, no entry stored in dbm for [ENSG00000234091.1]
WARNING, no entry stored in dbm for [ENSG00000235651.1]
WARNING, no entry stored in dbm for [ENSG00000231563.2]
WARNING, no entry stored in dbm for [ENSG00000228436.3]
WARNING, no entry stored in dbm for [ENSG00000220685.3]
WARNING, no entry stored in dbm for [ENSG00000273149.1]
WARNING, no entry stored in dbm for [ENSG00000287235.1]
WARNING, no entry stored in dbm for [ENSG00000283384.1]
WARNING, no entry stored in dbm for [ENSG00000231902.2]
WARNING, no entry stored in dbm for [ENSG00000276805.2]
WARNING, no entry stored in dbm for [ENSG00000286546.1]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000288543.1]
WARNING, no entry stored in dbm for [ENSG00000288543.1]
WARNING, no entry stored in dbm for [ENSG00000277460.1]
WARNING, no entry stored in dbm for [ENSG00000226310.1]
WARNING, no entry stored in dbm for [ENSG00000230912.1]
WARNING, no entry stored in dbm for [ENSG00000213606.3]
WARNING, no entry stored in dbm for [ENSG00000213509.4]
WARNING, no entry stored in dbm for [ENSG00000261218.5]
WARNING, no entry stored in dbm for [ENSG00000223959.8]
WARNING, no entry stored in dbm for [ENSG00000280194.1]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000286912.1]
WARNING, no entry stored in dbm for [ENSG00000258334.1]
WARNING, no entry stored in dbm for [ENSG00000254392.1]
WARNING, no entry stored in dbm for [ENSG00000285062.1]
WARNING, no entry stored in dbm for [ENSG00000275140.1]
WARNING, no entry stored in dbm for [ENSG00000286831.1]
WARNING, no entry stored in dbm for [ENSG00000283453.2]
WARNING, no entry stored in dbm for [ENSG00000277089.4]
WARNING, no entry stored in dbm for [ENSG00000282572.2]
WARNING, no entry stored in dbm for [ENSG00000241860.7]
WARNING, no entry stored in dbm for [ENSG00000273644.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000251417.2]
WARNING, no entry stored in dbm for [ENSG00000261259.1]
WARNING, no entry stored in dbm for [ENSG00000246596.7]
WARNING, no entry stored in dbm for [ENSG00000246596.7]
WARNING, no entry stored in dbm for [ENSG00000250909.1]
WARNING, no entry stored in dbm for [ENSG00000286406.1]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000238035.8]
WARNING, no entry stored in dbm for [ENSG00000268218.1]
WARNING, no entry stored in dbm for [ENSG00000205037.2]
WARNING, no entry stored in dbm for [ENSG00000283345.1]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000248994.2]
WARNING, no entry stored in dbm for [ENSG00000264985.4]
WARNING, no entry stored in dbm for [ENSG00000248240.1]
WARNING, no entry stored in dbm for [ENSG00000248240.1]
WARNING, no entry stored in dbm for [ENSG00000252337.1]
WARNING, no entry stored in dbm for [ENSG00000278791.1]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000287658.1]
WARNING, no entry stored in dbm for [ENSG00000233654.2]
WARNING, no entry stored in dbm for [ENSG00000245025.3]
WARNING, no entry stored in dbm for [ENSG00000260293.2]
WARNING, no entry stored in dbm for [ENSG00000253836.1]
WARNING, no entry stored in dbm for [ENSG00000233133.1]
WARNING, no entry stored in dbm for [ENSG00000278097.1]
WARNING, no entry stored in dbm for [ENSG00000224479.6]
WARNING, no entry stored in dbm for [ENSG00000259692.6]
WARNING, no entry stored in dbm for [ENSG00000285613.1]
WARNING, no entry stored in dbm for [ENSG00000287129.1]
WARNING, no entry stored in dbm for [ENSG00000286152.1]
WARNING, no entry stored in dbm for [ENSG00000269292.1]
WARNING, no entry stored in dbm for [ENSG00000265401.1]
WARNING, no entry stored in dbm for [ENSG00000173209.23]
WARNING, no entry stored in dbm for [ENSG00000282057.1]
WARNING, no entry stored in dbm for [ENSG00000239268.3]
WARNING, no entry stored in dbm for [ENSG00000276538.1]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000287351.1]
WARNING, no entry stored in dbm for [ENSG00000262136.1]
WARNING, no entry stored in dbm for [ENSG00000286753.1]
WARNING, no entry stored in dbm for [ENSG00000239969.5]
WARNING, no entry stored in dbm for [ENSG00000239969.5]
WARNING, no entry stored in dbm for [ENSG00000245694.10]
WARNING, no entry stored in dbm for [ENSG00000239969.5]
WARNING, no entry stored in dbm for [ENSG00000230305.2]
WARNING, no entry stored in dbm for [ENSG00000285581.1]
WARNING, no entry stored in dbm for [ENSG00000235085.3]
WARNING, no entry stored in dbm for [ENSG00000259418.1]
WARNING, no entry stored in dbm for [ENSG00000265936.1]
WARNING, no entry stored in dbm for [ENSG00000214259.3]
WARNING, no entry stored in dbm for [ENSG00000265750.1]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [ENSG00000233673.7]
WARNING, no entry stored in dbm for [ENSG00000285592.1]
WARNING, no entry stored in dbm for [ENSG00000274565.1]
WARNING, no entry stored in dbm for [ENSG00000282440.1]
WARNING, no entry stored in dbm for [ENSG00000258225.1]
WARNING, no entry stored in dbm for [ENSG00000189229.11]
WARNING, no entry stored in dbm for [ENSG00000197099.8]
WARNING, no entry stored in dbm for [ENSG00000197099.8]
WARNING, no entry stored in dbm for [ENSG00000197099.8]
WARNING, no entry stored in dbm for [ENSG00000197099.8]
WARNING, no entry stored in dbm for [ENSG00000229118.1]
WARNING, no entry stored in dbm for [ENSG00000240882.1]
WARNING, no entry stored in dbm for [ENSG00000229212.8]
WARNING, no entry stored in dbm for [ENSG00000232827.3]
WARNING, no entry stored in dbm for [ENSG00000229212.8]
WARNING, no entry stored in dbm for [ENSG00000279973.2]
WARNING, no entry stored in dbm for [ENSG00000229212.8]
WARNING, no entry stored in dbm for [ENSG00000187172.15]
WARNING, no entry stored in dbm for [ENSG00000229212.8]
WARNING, no entry stored in dbm for [ENSG00000248103.1]
WARNING, no entry stored in dbm for [ENSG00000253200.1]
WARNING, no entry stored in dbm for [ENSG00000286622.1]
WARNING, no entry stored in dbm for [ENSG00000257817.2]
WARNING, no entry stored in dbm for [ENSG00000250764.1]
WARNING, no entry stored in dbm for [ENSG00000251131.2]
WARNING, no entry stored in dbm for [ENSG00000259429.5]
WARNING, no entry stored in dbm for [ENSG00000279668.3]
WARNING, no entry stored in dbm for [ENSG00000244313.3]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000242338.6]
WARNING, no entry stored in dbm for [ENSG00000254777.5]
WARNING, no entry stored in dbm for [ENSG00000268093.1]
WARNING, no entry stored in dbm for [ENSG00000272800.3]
WARNING, no entry stored in dbm for [ENSG00000259544.1]
WARNING, no entry stored in dbm for [ENSG00000267466.1]
WARNING, no entry stored in dbm for [ENSG00000284430.1]
WARNING, no entry stored in dbm for [ENSG00000242858.1]
WARNING, no entry stored in dbm for [ENSG00000279569.1]
WARNING, no entry stored in dbm for [ENSG00000228005.1]
WARNING, no entry stored in dbm for [ENSG00000214559.3]
WARNING, no entry stored in dbm for [ENSG00000281896.1]
WARNING, no entry stored in dbm for [ENSG00000281896.1]
WARNING, no entry stored in dbm for [ENSG00000277053.4]
WARNING, no entry stored in dbm for [ENSG00000281896.1]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000281896.1]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000285106.2]
WARNING, no entry stored in dbm for [ENSG00000261329.6]
WARNING, no entry stored in dbm for [ENSG00000196796.5]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000186148.13]
WARNING, no entry stored in dbm for [ENSG00000237720.2]
WARNING, no entry stored in dbm for [ENSG00000249839.1]
WARNING, no entry stored in dbm for [ENSG00000249839.1]
WARNING, no entry stored in dbm for [ENSG00000268119.6]
WARNING, no entry stored in dbm for [ENSG00000223725.6]
WARNING, no entry stored in dbm for [ENSG00000274478.1]
WARNING, no entry stored in dbm for [ENSG00000238045.9]
WARNING, no entry stored in dbm for [ENSG00000284671.1]
WARNING, no entry stored in dbm for [ENSG00000284649.1]
WARNING, no entry stored in dbm for [ENSG00000284649.1]
WARNING, no entry stored in dbm for [ENSG00000284671.1]
WARNING, no entry stored in dbm for [ENSG00000214331.8]
WARNING, no entry stored in dbm for [ENSG00000257252.6]
WARNING, no entry stored in dbm for [ENSG00000247796.3]
WARNING, no entry stored in dbm for [ENSG00000269371.1]
WARNING, no entry stored in dbm for [ENSG00000287263.1]
WARNING, no entry stored in dbm for [ENSG00000279529.1]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000249476.2]
WARNING, no entry stored in dbm for [ENSG00000286056.1]
WARNING, no entry stored in dbm for [ENSG00000198491.3]
WARNING, no entry stored in dbm for [ENSG00000278654.1]
WARNING, no entry stored in dbm for [ENSG00000286611.1]
WARNING, no entry stored in dbm for [ENSG00000227946.1]
WARNING, no entry stored in dbm for [ENSG00000260850.2]
WARNING, no entry stored in dbm for [ENSG00000284959.2]
WARNING, no entry stored in dbm for [ENSG00000279865.1]
WARNING, no entry stored in dbm for [ENSG00000196205.8]
WARNING, no entry stored in dbm for [ENSG00000283214.1]
WARNING, no entry stored in dbm for [ENSG00000269745.1]
WARNING, no entry stored in dbm for [ENSG00000235852.1]
WARNING, no entry stored in dbm for [ENSG00000256210.3]
WARNING, no entry stored in dbm for [ENSG00000278920.1]
WARNING, no entry stored in dbm for [ENSG00000230305.2]
WARNING, no entry stored in dbm for [ENSG00000250778.1]
WARNING, no entry stored in dbm for [ENSG00000241057.2]
WARNING, no entry stored in dbm for [ENSG00000241057.2]
WARNING, no entry stored in dbm for [ENSG00000228113.7]
WARNING, no entry stored in dbm for [ENSG00000279743.1]
WARNING, no entry stored in dbm for [ENSG00000231749.3]
WARNING, no entry stored in dbm for [ENSG00000248671.8]
WARNING, no entry stored in dbm for [ENSG00000287129.1]
WARNING, no entry stored in dbm for [ENSG00000231646.6]


	* STAR-Fusion complete.  See output: /tmp/nxf.6fau5xL6fL/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)