Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/87/eaca3572b29613f7eebd4c56c061de/659_dcz-T1-TRNA-1_B23WHTKLT4_1_1.fastp.fastq.gz
Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a2/21367a2349ffb50e5def19401f80ec/.command.run
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a2/21367a2349ffb50e5def19401f80ec/.command.sh
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/87/eaca3572b29613f7eebd4c56c061de/659_dcz-T1-TRNA-1_B23WHTKLT4_1_2.fastp.fastq.gz
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e0/7ad5b459a026a5348c108140b39665/659_dcz-T1-TRNA-1_B23WHTKLT4_1.Chimeric.out.junction
==> STAGING COMPLETE (6 inputs)
-ctat genome lib [/tmp/nxf.v1T5zZaIZJ/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.v1T5zZaIZJ/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.v1T5zZaIZJ/./star-fusion.preliminary
-sample contains 47921027 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.v1T5zZaIZJ/ctat_genome_lib_build_dir -J /tmp/nxf.v1T5zZaIZJ/659_dcz-T1-TRNA-1_B23WHTKLT4_1.Chimeric.out.junction -O /tmp/nxf.v1T5zZaIZJ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4
-parsing fusion evidence: /tmp/nxf.v1T5zZaIZJ/659_dcz-T1-TRNA-1_B23WHTKLT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.v1T5zZaIZJ/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes
[10000], rate=75000.00/min
[20000], rate=80000.00/min
[30000], rate=69230.77/min
[40000], rate=61538.46/min
[50000], rate=55555.56/min
[60000], rate=53731.34/min
[70000], rate=53164.56/min
[80000], rate=55172.41/min
[90000], rate=56250.00/min
[100000], rate=58252.43/min
[110000], rate=58928.57/min
[120000], rate=57600.00/min
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[400000], rate=60913.71/min
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[420000], rate=61764.71/min
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[440000], rate=62707.84/min
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[460000], rate=62727.27/min
[470000], rate=62806.24/min
[480000], rate=63019.69/min
[490000], rate=63636.36/min -building interval tree based on /tmp/nxf.v1T5zZaIZJ/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes
[10000], rate=50000.00/min
[20000], rate=57142.86/min
[30000], rate=62068.97/min
[40000], rate=70588.24/min
[50000], rate=73170.73/min
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[100000], rate=48387.10/min
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[150000], rate=48387.10/min
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[200000], rate=53333.33/min
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[220000], rate=55230.13/min
[230000], rate=56326.53/min
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[260000], rate=59770.11/min
[270000], rate=60902.26/min
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[290000], rate=63043.48/min
[300000], rate=64056.94/min
[310000], rate=64583.33/min
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[330000], rate=65780.73/min
[340000], rate=66019.42/min
[350000], rate=66455.70/min
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[370000], rate=67682.93/min
[380000], rate=68263.47/min
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[400000], rate=65040.65/min
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[480000], rate=61802.58/min
[490000], rate=61635.22/min -building interval tree based on /tmp/nxf.v1T5zZaIZJ/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes
[10000], rate=66666.67/min
[20000], rate=57142.86/min
[30000], rate=52941.18/min
[40000], rate=53333.33/min
[50000], rate=55555.56/min
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[100000], rate=61224.49/min
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[480000], rate=56360.08/min
[490000], rate=56106.87/min -building interval tree based on /tmp/nxf.v1T5zZaIZJ/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes
[10000], rate=120000.00/min
[20000], rate=150000.00/min
[30000], rate=128571.43/min
[40000], rate=133333.33/min
[50000], rate=125000.00/min
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[460000], rate=51301.12/min
[470000], rate=51743.12/min
[480000], rate=52363.64/min
[490000], rate=52782.76/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.v1T5zZaIZJ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.v1T5zZaIZJ/ctat_genome_lib_build_dir --filt_file /tmp/nxf.v1T5zZaIZJ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.v1T5zZaIZJ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-parsing /tmp/nxf.v1T5zZaIZJ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.
6000000.00 reads per min processed...
4000000.00 reads per min processed...
3600000.00 reads per min processed...
3428571.43 reads per min processed...
3333333.33 reads per min processed...
3272727.27 reads per min processed...
3230769.23 reads per min processed...
3200000.00 reads per min processed...
3176470.59 reads per min processed...
3157894.74 reads per min processed...
3300000.00 reads per min processed...
3272727.27 reads per min processed...
3391304.35 reads per min processed...
3360000.00 reads per min processed...
3333333.33 reads per min processed...
3310344.83 reads per min processed...
3290322.58 reads per min processed...
done.
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.v1T5zZaIZJ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.v1T5zZaIZJ/./star-fusion.preliminary/star-fusion
-parsing fusion evidence: /tmp/nxf.v1T5zZaIZJ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.v1T5zZaIZJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.v1T5zZaIZJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.v1T5zZaIZJ/659_dcz-T1-TRNA-1_B23WHTKLT4_1.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.v1T5zZaIZJ/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.v1T5zZaIZJ/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.v1T5zZaIZJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -31792.784081
EM: Round [1] log likelihood: -31781.112478
EM: Round [2] log likelihood: -31776.460259
EM: Round [3] log likelihood: -31774.227386
EM: Round [4] log likelihood: -31773.055040
EM: Round [5] log likelihood: -31772.397345
EM: Round [6] log likelihood: -31772.004604
EM: Round [7] log likelihood: -31771.756013
EM: Round [8] log likelihood: -31771.590474
EM: Round [9] log likelihood: -31771.475480
EM: Round [10] log likelihood: -31771.392755
EM: Round [11] log likelihood: -31771.331466
EM: Round [12] log likelihood: -31771.284894
EM: Round [13] log likelihood: -31771.248707
EM: Round [14] log likelihood: -31771.220026
EM: Round [15] log likelihood: -31771.196888
EM: Round [16] log likelihood: -31771.177923
EM: Round [17] log likelihood: -31771.162158
EM: Round [18] log likelihood: -31771.148889
EM: Round [19] log likelihood: -31771.137599
EM: Round [20] log likelihood: -31771.127902
EM: Round [21] log likelihood: -31771.119504
EM: Round [22] log likelihood: -31771.112180
EM: Round [23] log likelihood: -31771.105754
EM: Round [24] log likelihood: -31771.100088
EM: Round [25] log likelihood: -31771.095069
EM: Round [26] log likelihood: -31771.090608
EM: Round [27] log likelihood: -31771.086630
EM: Round [28] log likelihood: -31771.083073
EM: Round [29] log likelihood: -31771.079886
EM: Round [30] log likelihood: -31771.077025
EM: Round [31] log likelihood: -31771.074452
EM: Round [32] log likelihood: -31771.072134
EM: Round [33] log likelihood: -31771.070045
EM: Round [34] log likelihood: -31771.068160
EM: Round [35] log likelihood: -31771.066456
EM: Round [36] log likelihood: -31771.064916
EM: Round [37] log likelihood: -31771.063523
EM: Round [38] log likelihood: -31771.062263
EM: Round [39] log likelihood: -31771.061121
EM: Round [40] log likelihood: -31771.060086
EM: Round [41] log likelihood: -31771.059149
EM: Round [42] log likelihood: -31771.058299
EM: Round [43] log likelihood: -31771.057528
EM: Round [44] log likelihood: -31771.056829
EM: Round [45] log likelihood: -31771.056194
EM: Round [46] log likelihood: -31771.055618
EM: Round [47] log likelihood: -31771.055096
EM: Round [48] log likelihood: -31771.054621
EM: Round [49] log likelihood: -31771.054190
EM: Round [50] log likelihood: -31771.053799
EM: Round [51] log likelihood: -31771.053444
EM: Round [52] log likelihood: -31771.053121
EM: Round [53] log likelihood: -31771.052828
EM: Round [54] log likelihood: -31771.052561
EM: Round [55] log likelihood: -31771.052319
EM: Round [56] log likelihood: -31771.052100
EM: Round [57] log likelihood: -31771.051900
EM: Round [58] log likelihood: -31771.051718
EM: Round [59] log likelihood: -31771.051553
EM: Round [60] log likelihood: -31771.051404
EM: Round [61] log likelihood: -31771.051267
EM: Round [62] log likelihood: -31771.051144
EM: Round [63] log likelihood: -31771.051031
EM: Round [64] log likelihood: -31771.050929
EM: Round [65] log likelihood: -31771.050836
EM: Stopping iterations at round 65 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -31781.940378
EM: Round [1] log likelihood: -31770.989692
EM: Round [2] log likelihood: -31766.668512
EM: Round [3] log likelihood: -31764.610611
EM: Round [4] log likelihood: -31763.540737
EM: Round [5] log likelihood: -31762.949173
EM: Round [6] log likelihood: -31762.602608
EM: Round [7] log likelihood: -31762.387687
EM: Round [8] log likelihood: -31762.247016
EM: Round [9] log likelihood: -31762.150334
EM: Round [10] log likelihood: -31762.080993
EM: Round [11] log likelihood: -31762.029423
EM: Round [12] log likelihood: -31761.989885
EM: Round [13] log likelihood: -31761.958788
EM: Round [14] log likelihood: -31761.933803
EM: Round [15] log likelihood: -31761.913362
EM: Round [16] log likelihood: -31761.896382
EM: Round [17] log likelihood: -31761.882090
EM: Round [18] log likelihood: -31761.869925
EM: Round [19] log likelihood: -31761.859472
EM: Round [20] log likelihood: -31761.850415
EM: Round [21] log likelihood: -31761.842512
EM: Round [22] log likelihood: -31761.835575
EM: Round [23] log likelihood: -31761.829454
EM: Round [24] log likelihood: -31761.824030
EM: Round [25] log likelihood: -31761.819205
EM: Round [26] log likelihood: -31761.814900
EM: Round [27] log likelihood: -31761.811049
EM: Round [28] log likelihood: -31761.807595
EM: Round [29] log likelihood: -31761.804492
EM: Round [30] log likelihood: -31761.801700
EM: Round [31] log likelihood: -31761.799184
EM: Round [32] log likelihood: -31761.796913
EM: Round [33] log likelihood: -31761.794863
EM: Round [34] log likelihood: -31761.793009
EM: Round [35] log likelihood: -31761.791332
EM: Round [36] log likelihood: -31761.789814
EM: Round [37] log likelihood: -31761.788439
EM: Round [38] log likelihood: -31761.787194
EM: Round [39] log likelihood: -31761.786065
EM: Round [40] log likelihood: -31761.785040
EM: Round [41] log likelihood: -31761.784112
EM: Round [42] log likelihood: -31761.783269
EM: Round [43] log likelihood: -31761.782504
EM: Round [44] log likelihood: -31761.781810
EM: Round [45] log likelihood: -31761.781179
EM: Round [46] log likelihood: -31761.780607
EM: Round [47] log likelihood: -31761.780087
EM: Round [48] log likelihood: -31761.779615
EM: Round [49] log likelihood: -31761.779186
EM: Round [50] log likelihood: -31761.778796
EM: Round [51] log likelihood: -31761.778442
EM: Round [52] log likelihood: -31761.778121
EM: Round [53] log likelihood: -31761.777829
EM: Round [54] log likelihood: -31761.777563
EM: Round [55] log likelihood: -31761.777322
EM: Round [56] log likelihood: -31761.777103
EM: Round [57] log likelihood: -31761.776903
EM: Round [58] log likelihood: -31761.776722
EM: Round [59] log likelihood: -31761.776558
EM: Round [60] log likelihood: -31761.776408
EM: Round [61] log likelihood: -31761.776272
EM: Round [62] log likelihood: -31761.776148
EM: Round [63] log likelihood: -31761.776036
EM: Round [64] log likelihood: -31761.775934
EM: Round [65] log likelihood: -31761.775841
EM: Stopping iterations at round 65 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.v1T5zZaIZJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.v1T5zZaIZJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.v1T5zZaIZJ/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.v1T5zZaIZJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.v1T5zZaIZJ/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.v1T5zZaIZJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.v1T5zZaIZJ/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20
CMD: cp /tmp/nxf.v1T5zZaIZJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.v1T5zZaIZJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.v1T5zZaIZJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.v1T5zZaIZJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.v1T5zZaIZJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.v1T5zZaIZJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.v1T5zZaIZJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 47921027 > /tmp/nxf.v1T5zZaIZJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.v1T5zZaIZJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.v1T5zZaIZJ/ctat_genome_lib_build_dir > /tmp/nxf.v1T5zZaIZJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.v1T5zZaIZJ/ctat_genome_lib_build_dir --annotate /tmp/nxf.v1T5zZaIZJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.v1T5zZaIZJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.v1T5zZaIZJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.v1T5zZaIZJ/ctat_genome_lib_build_dir
-done, see /tmp/nxf.v1T5zZaIZJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.v1T5zZaIZJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.v1T5zZaIZJ/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 432, filtered: 3581)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.v1T5zZaIZJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.v1T5zZaIZJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.v1T5zZaIZJ/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000239268.3]
WARNING, no entry stored in dbm for [ENSG00000226049.3]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [ENSG00000225851.1]
WARNING, no entry stored in dbm for [ENSG00000234420.7]
WARNING, no entry stored in dbm for [ENSG00000256817.1]
WARNING, no entry stored in dbm for [ENSG00000234782.3]
WARNING, no entry stored in dbm for [ENSG00000225689.2]
WARNING, no entry stored in dbm for [ENSG00000278292.1]
WARNING, no entry stored in dbm for [ENSG00000213467.4]
WARNING, no entry stored in dbm for [ENSG00000196796.5]
WARNING, no entry stored in dbm for [ENSG00000153363.13]
WARNING, no entry stored in dbm for [ENSG00000283096.1]
WARNING, no entry stored in dbm for [ENSG00000224307.2]
WARNING, no entry stored in dbm for [ENSG00000257252.6]
WARNING, no entry stored in dbm for [ENSG00000276538.1]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000235140.2]
WARNING, no entry stored in dbm for [ENSG00000261329.6]
WARNING, no entry stored in dbm for [ENSG00000196796.5]
WARNING, no entry stored in dbm for [ENSG00000179406.8]
WARNING, no entry stored in dbm for [ENSG00000258301.3]
WARNING, no entry stored in dbm for [ENSG00000224082.1]
WARNING, no entry stored in dbm for [ENSG00000224082.1]
WARNING, no entry stored in dbm for [ENSG00000189136.9]
WARNING, no entry stored in dbm for [ENSG00000259429.5]
WARNING, no entry stored in dbm for [ENSG00000241014.2]
WARNING, no entry stored in dbm for [ENSG00000250290.1]
WARNING, no entry stored in dbm for [ENSG00000260072.1]
WARNING, no entry stored in dbm for [ENSG00000287261.1]
WARNING, no entry stored in dbm for [ENSG00000247796.3]
WARNING, no entry stored in dbm for [ENSG00000223949.8]
WARNING, no entry stored in dbm for [ENSG00000253559.1]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000234512.1]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000213693.4]
WARNING, no entry stored in dbm for [ENSG00000281131.1]
WARNING, no entry stored in dbm for [ENSG00000272030.1]
WARNING, no entry stored in dbm for [ENSG00000230809.1]
WARNING, no entry stored in dbm for [ENSG00000244031.3]
WARNING, no entry stored in dbm for [ENSG00000239435.2]
WARNING, no entry stored in dbm for [ENSG00000238069.1]
WARNING, no entry stored in dbm for [ENSG00000244705.1]
WARNING, no entry stored in dbm for [ENSG00000214878.2]
WARNING, no entry stored in dbm for [ENSG00000230194.1]
WARNING, no entry stored in dbm for [ENSG00000226156.1]
WARNING, no entry stored in dbm for [ENSG00000234851.4]
WARNING, no entry stored in dbm for [ENSG00000239899.3]
WARNING, no entry stored in dbm for [ENSG00000242381.3]
WARNING, no entry stored in dbm for [ENSG00000239899.3]
WARNING, no entry stored in dbm for [ENSG00000274656.1]
WARNING, no entry stored in dbm for [ENSG00000239899.3]
WARNING, no entry stored in dbm for [ENSG00000241420.3]
WARNING, no entry stored in dbm for [ENSG00000239899.3]
WARNING, no entry stored in dbm for [ENSG00000266439.2]
WARNING, no entry stored in dbm for [ENSG00000239899.3]
WARNING, no entry stored in dbm for [ENSG00000277483.1]
WARNING, no entry stored in dbm for [ENSG00000239899.3]
WARNING, no entry stored in dbm for [ENSG00000265386.2]
WARNING, no entry stored in dbm for [ENSG00000239899.3]
WARNING, no entry stored in dbm for [ENSG00000234159.1]
WARNING, no entry stored in dbm for [ENSG00000253327.2]
WARNING, no entry stored in dbm for [ENSG00000229638.1]
WARNING, no entry stored in dbm for [ENSG00000177410.13]
WARNING, no entry stored in dbm for [ENSG00000283285.1]
WARNING, no entry stored in dbm for [ENSG00000272046.1]
WARNING, no entry stored in dbm for [ENSG00000260919.1]
WARNING, no entry stored in dbm for [ENSG00000244642.3]
WARNING, no entry stored in dbm for [ENSG00000224729.6]
WARNING, no entry stored in dbm for [ENSG00000225937.3]
WARNING, no entry stored in dbm for [ENSG00000286201.1]
WARNING, no entry stored in dbm for [ENSG00000256040.2]
WARNING, no entry stored in dbm for [ENSG00000256040.2]
WARNING, no entry stored in dbm for [ENSG00000285103.2]
WARNING, no entry stored in dbm for [ENSG00000227070.1]
WARNING, no entry stored in dbm for [ENSG00000260075.1]
WARNING, no entry stored in dbm for [ENSG00000259275.4]
WARNING, no entry stored in dbm for [ENSG00000180610.10]
WARNING, no entry stored in dbm for [ENSG00000123009.4]
WARNING, no entry stored in dbm for [ENSG00000188850.9]
WARNING, no entry stored in dbm for [ENSG00000279453.1]
WARNING, no entry stored in dbm for [ENSG00000279453.1]
WARNING, no entry stored in dbm for [ENSG00000226289.1]
WARNING, no entry stored in dbm for [ENSG00000279159.1]
WARNING, no entry stored in dbm for [ENSG00000251593.1]
WARNING, no entry stored in dbm for [ENSG00000251593.1]
WARNING, no entry stored in dbm for [ENSG00000257480.1]
WARNING, no entry stored in dbm for [ENSG00000257279.1]
WARNING, no entry stored in dbm for [ENSG00000245146.7]
WARNING, no entry stored in dbm for [ENSG00000235974.1]
WARNING, no entry stored in dbm for [ENSG00000237057.3]
WARNING, no entry stored in dbm for [ENSG00000231040.2]
WARNING, no entry stored in dbm for [ENSG00000234572.1]
WARNING, no entry stored in dbm for [ENSG00000255171.7]
WARNING, no entry stored in dbm for [ENSG00000255815.3]
WARNING, no entry stored in dbm for [ENSG00000226009.2]
WARNING, no entry stored in dbm for [ENSG00000232420.2]
WARNING, no entry stored in dbm for [ENSG00000262558.1]
WARNING, no entry stored in dbm for [ENSG00000227935.1]
WARNING, no entry stored in dbm for [ENSG00000231470.1]
WARNING, no entry stored in dbm for [ENSG00000203489.3]
WARNING, no entry stored in dbm for [ENSG00000206337.12]
WARNING, no entry stored in dbm for [ENSG00000214433.4]
WARNING, no entry stored in dbm for [ENSG00000239533.6]
WARNING, no entry stored in dbm for [ENSG00000280208.1]
WARNING, no entry stored in dbm for [ENSG00000281383.1]
WARNING, no entry stored in dbm for [ENSG00000280800.1]
WARNING, no entry stored in dbm for [ENSG00000281181.1]
WARNING, no entry stored in dbm for [ENSG00000280614.1]
WARNING, no entry stored in dbm for [ENSG00000228327.3]
WARNING, no entry stored in dbm for [ENSG00000229370.1]
WARNING, no entry stored in dbm for [ENSG00000282572.2]
WARNING, no entry stored in dbm for [ENSG00000240499.7]
WARNING, no entry stored in dbm for [ENSG00000186704.9]
WARNING, no entry stored in dbm for [ENSG00000255248.9]
WARNING, no entry stored in dbm for [ENSG00000254275.6]
WARNING, no entry stored in dbm for [ENSG00000277806.1]
WARNING, no entry stored in dbm for [ENSG00000277426.1]
WARNING, no entry stored in dbm for [ENSG00000245937.8]
WARNING, no entry stored in dbm for [ENSG00000264177.1]
WARNING, no entry stored in dbm for [ENSG00000188511.12]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000275088.1]
WARNING, no entry stored in dbm for [ENSG00000267080.6]
WARNING, no entry stored in dbm for [ENSG00000264964.2]
WARNING, no entry stored in dbm for [ENSG00000279495.1]
WARNING, no entry stored in dbm for [ENSG00000235749.3]
WARNING, no entry stored in dbm for [ENSG00000273507.5]
WARNING, no entry stored in dbm for [ENSG00000246203.2]
WARNING, no entry stored in dbm for [ENSG00000259133.5]
WARNING, no entry stored in dbm for [ENSG00000220685.3]
WARNING, no entry stored in dbm for [ENSG00000287593.1]
WARNING, no entry stored in dbm for [ENSG00000151631.8]
WARNING, no entry stored in dbm for [ENSG00000265018.6]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000229930.1]
WARNING, no entry stored in dbm for [ENSG00000260756.1]
WARNING, no entry stored in dbm for [ENSG00000283345.1]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000286103.1]
WARNING, no entry stored in dbm for [ENSG00000260293.2]
WARNING, no entry stored in dbm for [ENSG00000260236.1]
WARNING, no entry stored in dbm for [ENSG00000260236.1]
WARNING, no entry stored in dbm for [ENSG00000259768.6]
WARNING, no entry stored in dbm for [ENSG00000234638.1]
WARNING, no entry stored in dbm for [ENSG00000257817.2]
WARNING, no entry stored in dbm for [ENSG00000287677.2]
WARNING, no entry stored in dbm for [ENSG00000268093.1]
WARNING, no entry stored in dbm for [ENSG00000253907.1]
WARNING, no entry stored in dbm for [ENSG00000260624.2]
WARNING, no entry stored in dbm for [ENSG00000269032.1]
WARNING, no entry stored in dbm for [ENSG00000223508.5]
WARNING, no entry stored in dbm for [ENSG00000238045.9]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000249494.6]
WARNING, no entry stored in dbm for [ENSG00000256417.1]
WARNING, no entry stored in dbm for [ENSG00000267469.1]
WARNING, no entry stored in dbm for [ENSG00000274712.2]
WARNING, no entry stored in dbm for [ENSG00000274712.2]
WARNING, no entry stored in dbm for [ENSG00000274712.2]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000231749.3]
* STAR-Fusion complete. See output: /tmp/nxf.v1T5zZaIZJ/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)